{ "tc_result": [ { "organism_name": "Prevotella bivia", "strain": "strain=JCVIHMP010", "accession": "GCA_000177315.1", "taxid": 28125, "species_taxid": 28125, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 747, "total_fragments": 753, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Prevotella bivia", "strain": "strain=DSM 20514", "accession": "GCA_000262545.1", "taxid": 28125, "species_taxid": 28125, "relation_to_type": "type", "validated": true, "ani": 99.9989, "matched_fragments": 753, "total_fragments": 753, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Prevotella ihumii", "strain": "strain=Marseille-P3385", "accession": "GCA_900155655.1", "taxid": 1917878, "species_taxid": 1917878, "relation_to_type": "type", "validated": true, "ani": 83.2583, "matched_fragments": 188, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella disiens", "strain": "strain=ATCC 29426", "accession": "GCA_000467875.1", "taxid": 28130, "species_taxid": 28130, "relation_to_type": "type", "validated": true, "ani": 81.7183, "matched_fragments": 143, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella amnii", "strain": "strain=DSM 23384", "accession": "GCA_000378745.1", "taxid": 419005, "species_taxid": 419005, "relation_to_type": "type", "validated": true, "ani": 81.3816, "matched_fragments": 312, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella amnii", "strain": "strain=JCM 14753", "accession": "GCA_000613765.1", "taxid": 419005, "species_taxid": 419005, "relation_to_type": "type", "validated": true, "ani": 81.0238, "matched_fragments": 290, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella vespertina", "strain": "strain=A2879", "accession": "GCA_009728485.1", "taxid": 2608404, "species_taxid": 2608404, "relation_to_type": "type", "validated": true, "ani": 80.1738, "matched_fragments": 142, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella scopos", "strain": "strain=W2052", "accession": "GCA_001683355.1", "taxid": 589437, "species_taxid": 589437, "relation_to_type": "type", "validated": true, "ani": 79.4522, "matched_fragments": 171, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella scopos", "strain": "strain=W2052", "accession": "GCA_018127785.1", "taxid": 589437, "species_taxid": 589437, "relation_to_type": "type", "validated": true, "ani": 79.4514, "matched_fragments": 172, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella melaninogenica", "strain": "strain=FDAARGOS_1566", "accession": "GCA_020735785.1", "taxid": 28132, "species_taxid": 28132, "relation_to_type": "suspected-type", "validated": true, "ani": 79.2072, "matched_fragments": 151, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella copri", "strain": "strain=DSM 18205", "accession": "GCA_000157935.1", "taxid": 165179, "species_taxid": 165179, "relation_to_type": "suspected-type", "validated": true, "ani": 77.6026, "matched_fragments": 65, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella copri", "strain": "strain=DSM 18205", "accession": "GCA_025151535.1", "taxid": 165179, "species_taxid": 165179, "relation_to_type": "suspected-type", "validated": true, "ani": 77.5686, "matched_fragments": 65, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prevotella copri", "strain": "strain=DSM 18205", "accession": "GCA_009495405.1", "taxid": 165179, "species_taxid": 165179, "relation_to_type": "suspected-type", "validated": true, "ani": 77.3369, "matched_fragments": 64, "total_fragments": 753, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000262545.1", "gtdb_species": "s__Prevotella bivia", "ani": 99.9989, "matched_fragments": 753, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.82", "min_intra_species_ani": "98.45", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.86", "num_clustered_genomes": 8, "status": "conclusive" }, { "accession": "GCF_900155655.1", "gtdb_species": "s__Prevotella ihumii", "ani": 83.353, "matched_fragments": 186, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000613345.1", "gtdb_species": "s__Prevotella disiens", "ani": 82.5874, "matched_fragments": 167, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.74", "min_intra_species_ani": "97.99", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.82", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_000378745.1", "gtdb_species": "s__Prevotella amnii", "ani": 81.4309, "matched_fragments": 311, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.70", "min_intra_species_ani": "98.21", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.86", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_018127925.1", "gtdb_species": "s__Prevotella melaninogenica_C", "ani": 80.3317, "matched_fragments": 167, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018128065.1", "gtdb_species": "s__Prevotella sp000467895", "ani": 80.2595, "matched_fragments": 169, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.71", "min_intra_species_ani": "96.42", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.83", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000257925.1", "gtdb_species": "s__Prevotella sp000257925", "ani": 79.6061, "matched_fragments": 130, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.40", "min_intra_species_ani": "96.99", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.83", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCF_018127785.1", "gtdb_species": "s__Prevotella scopos", "ani": 79.4535, "matched_fragments": 171, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.97", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000144405.1", "gtdb_species": "s__Prevotella melaninogenica", "ani": 79.0309, "matched_fragments": 144, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.46", "min_intra_species_ani": "95.36", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.78", "num_clustered_genomes": 36, "status": "-" }, { "accession": "GCF_000688375.1", "gtdb_species": "s__Prevotella sp000688375", "ani": 78.4922, "matched_fragments": 108, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_019127135.1", "gtdb_species": "s__Prevotella sp900551275", "ani": 78.4617, "matched_fragments": 62, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0063, "mean_intra_species_ani": "98.12", "min_intra_species_ani": "96.96", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.77", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_003609775.1", "gtdb_species": "s__Prevotella melaninogenica_A", "ani": 78.0633, "matched_fragments": 145, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015074785.1", "gtdb_species": "s__Prevotella sp015074785", "ani": 77.9513, "matched_fragments": 58, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.6733, "mean_intra_species_ani": "96.50", "min_intra_species_ani": "95.88", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.71", "num_clustered_genomes": 45, "status": "-" }, { "accession": "GCF_000157935.1", "gtdb_species": "s__Prevotella copri", "ani": 77.6203, "matched_fragments": 66, "total_fragments": 753, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella", "ani_circumscription_radius": 95.6733, "mean_intra_species_ani": "96.34", "min_intra_species_ani": "95.85", "mean_intra_species_af": "0.75", "min_intra_species_af": "0.69", "num_clustered_genomes": 97, "status": "-" } ] }