# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_27	LOCUS_00260	sequence01:27689..28054(-)	frameshift		28122	WP_002288577.1	Cys-tRNA(Pro) deacylase	92.6	69.6	72.3
MGA_38	LOCUS_00370	sequence01:39545..39787(-)	frameshift		39888	WP_012027682.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	100.0	10.7	61.2
MGA_39	LOCUS_00380	sequence01:39694..40254(-)	frameshift		39898,40138,40147	WP_010905853.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	58.6	14.4	83.5
MGA_40	LOCUS_00390	sequence01:40236..41285(-)	frameshift		40153,40138,41517	WP_000108255.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	99.4	46.5	56.0
MGA_46	LOCUS_00450	sequence01:45389..46201(-)	partial			WP_002371451.1	hypothetical protein	69.3	62.6	47.7
MGA_70	LOCUS_00690	sequence01:66854..67186(-)	internal_stop_codon	67196..67198(-),66854..66856(-)		WP_011016458.1	AbrB family transcriptional regulator	100.0	31.3	27.3
MGA_129	LOCUS_01280	sequence01:131475..131954(-)	frameshift		131968	WP_001214239.1	zinc-dependent alcohol dehydrogenase family protein	93.7	45.5	37.3
MGA_130	LOCUS_01290	sequence01:131951..132457(-)	frameshift		131968	WP_000546076.1	zinc-dependent alcohol dehydrogenase family protein	97.0	49.7	48.8
MGA_163	LOCUS_01610	sequence01:165386..165700(-)	frameshift,internal_stop_codon	165748..165750(-),165399..165401(-)	165786,165450	WP_012027545.1	NAD(P)H-dependent oxidoreductase	91.3	47.5	60.0
MGA_190	LOCUS_01880	sequence01:187929..188888(-)	partial			WP_002387170.1	competence protein CoiA family protein	79.6	69.9	37.2
MGA_214	LOCUS_02120	sequence01:216141..216440(+)	partial			WP_012775157.1	IS200/IS605-like element ISSsu4 family transposase	96.0	61.7	78.9
MGA_215	LOCUS_02130	sequence01:217187..217645(-)	frameshift,internal_stop_codon	217037..217039(-),217112..217114(-)	217153,217207	WP_010989916.1	collagen binding domain-containing protein	94.7	8.4	41.7
MGA_218	LOCUS_02160	sequence01:219572..219907(-)	frameshift		219936	WP_002330912.1	IS256-like element ISLgar5 family transposase	100.0	28.0	91.9
MGA_220	LOCUS_02180	sequence01:220363..220758(-)	internal_stop_codon	220363..220365(-)		WP_081133701.1	IS256-like element ISEfm2 family transposase	100.0	33.4	89.3
MGA_224	LOCUS_02220	sequence01:223692..224540(-)	partial			WP_002263319.1	glycoside hydrolase family 25 protein	70.2	75.5	45.3
MGA_230	LOCUS_02270	sequence01:228645..229418(+)	partial			WP_002387667.1	CAP domain-containing protein	42.8	24.1	58.2
MGA_234	LOCUS_02310	sequence01:232356..232544(-)	partial			WP_000866686.1	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	93.5	15.4	69.0
MGA_248	LOCUS_02450	sequence01:246401..247342(-)	partial			WP_002387374.1	peptide ABC transporter substrate-binding protein	49.5	28.3	72.3
MGA_264	LOCUS_02600	sequence01:261963..263765(+)	partial			WP_012256147.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	42.2	39.4	34.0
MGA_265	LOCUS_02610	sequence01:264020..264529(-)	frameshift		264097	WP_000502302.1	GNAT family N-acetyltransferase	88.8	69.0	26.7
MGA_279	LOCUS_02750	sequence01:280191..280649(-)	partial			WP_012804033.1	PTS sugar transporter subunit IIA	86.8	65.5	34.8
MGA_282	LOCUS_02780	sequence01:283788..283991(-)	frameshift,internal_stop_codon	284249..284251(-)	283825,284098,283761	WP_143298399.1	IS5 family transposase	88.1	22.9	45.8
MGA_287	LOCUS_02830	sequence01:289383..289856(-)	partial			WP_011143700.1	glycosyltransferase	66.2	67.7	32.7
MGA_289	LOCUS_02840	sequence01:290683..291723(-)	frameshift		290724	WP_011101324.1	flippase	96.0	70.2	50.0
MGA_290	LOCUS_02850	sequence01:292109..293206(-)	partial			WP_011202471.1	glycosyltransferase	72.9	75.6	28.1
MGA_291	LOCUS_02860	sequence01:293226..293984(-)	frameshift		293979	WP_011922747.1	UDP-galactopyranose mutase	99.2	67.6	69.2
MGA_292	LOCUS_02870	sequence01:293899..294330(-)	frameshift		293979	WP_011476416.1	UDP-galactopyranose mutase	87.4	33.7	76.0
MGA_295	LOCUS_02900	sequence01:296768..297463(-)	partial			WP_000683964.1	lipopolysaccharide 1,6-galactosyltransferase	93.5	61.3	40.7
MGA_317	LOCUS_03120	sequence01:319135..319326(-)	partial			WP_014124664.1	IS200/IS605 family transposase	100.0	41.7	90.5
MGA_340	LOCUS_03350	sequence01:343186..343449(-)	partial			WP_011476657.1	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	90.8	8.9	79.7
MGA_378	LOCUS_03730	sequence01:382482..382814(-)	internal_stop_codon	382887..382889(-)		WP_003722315.1	ATP-binding cassette domain-containing protein	90.9	30.7	60.0
MGA_379	LOCUS_03740	sequence01:382887..383456(-)	internal_stop_codon	382887..382889(-)		WP_000786734.1	ATP-binding cassette domain-containing protein	99.5	60.1	60.1
MGA_389	LOCUS_03840	sequence01:395015..396763(-)	partial			WP_003233292.1	multidrug resistance ABC transporter ATP-binding protein/permease BmrD	86.3	74.6	50.1
MGA_392	LOCUS_03870	sequence01:399747..400073(-)	frameshift		400126	WP_002297192.1	dihydrofolate reductase family protein	80.6	50.3	42.5
MGA_393	LOCUS_03880	sequence01:400070..400306(-)	frameshift		400126	WP_002297192.1	dihydrofolate reductase family protein	91.0	41.0	54.9
MGA_410	LOCUS_04050	sequence01:419236..419529(+)	frameshift		419514	WP_102873197.1	IS3 family transposase	94.8	23.8	77.2
MGA_411	LOCUS_04060	sequence01:422971..423231(+)	partial			WP_011861112.1	CHAP domain-containing protein	95.3	13.0	45.9
MGA_412	LOCUS_04070	sequence01:423326..423823(-)	frameshift		423894	WP_010905505.1	cation-transporting P-type ATPase	90.9	16.3	80.0
MGA_413	LOCUS_04080	sequence01:423880..426090(-)	frameshift		423897	WP_010905505.1	cation-transporting P-type ATPase	98.2	78.4	68.7
MGA_415	LOCUS_04090	sequence01:430198..431094(-)	partial			WP_010890798.1	glycoside hydrolase family 43 protein	90.6	46.5	34.1
MGA_421	LOCUS_04140	sequence01:436007..437680(-)	partial			WP_005784478.1	FAD-dependent oxidoreductase	98.4	65.7	39.2
MGA_425	LOCUS_04180	sequence01:439491..440132(+)	internal_stop_codon	439302..439304(+),439482..439484(+)		WP_016252543.1	ISL3-like element IS1476 family transposase	96.7	48.3	40.3
MGA_475	LOCUS_04660	sequence01:496863..497435(-)	partial			WP_002286745.1	dihydrolipoamide dehydrogenase	90.5	59.1	54.1
MGA_486	LOCUS_04770	sequence01:507781..508116(-)	frameshift		507831	WP_001081002.1	VOC family protein	85.6	65.3	50.5
MGA_540	LOCUS_05280	sequence01:561955..562692(-)	internal_stop_codon	562705..562707(-)		WP_002287911.1	metallophosphoesterase	97.6	81.3	40.4
MGA_550	LOCUS_05380	sequence01:573341..573769(-)	partial			WP_002469559.1	antiholin-like murein hydrolase modulator LrgA	78.2	74.5	58.6
MGA_624	LOCUS_06100	sequence01:639709..640002(+)	internal_stop_codon	640000..640002(+)		WP_002285820.1	ISL3 family transposase	100.0	24.2	76.3
MGA_628	LOCUS_06140	sequence01:644111..644311(-)	frameshift		644360	WP_004255229.1	thiaminase II	97.0	29.4	46.9
MGA_629	LOCUS_06150	sequence01:644355..644786(-)	frameshift		644360	WP_004255229.1	thiaminase II	92.3	60.6	52.3
MGA_644	LOCUS_06300	sequence01:659558..660223(-)	frameshift		660215	WP_002364946.1	isochorismate synthase	95.9	46.4	56.1
MGA_645	LOCUS_06310	sequence01:660201..660929(-)	frameshift		660215	WP_002364946.1	isochorismate synthase	99.2	54.5	31.4
MGA_657	LOCUS_06420	sequence01:672602..674386(-)	partial			WP_011074684.1	dextranase DexA	99.2	74.6	29.6
MGA_686	LOCUS_06700	sequence01:705112..706050(-)	partial			WP_012256471.1	carbohydrate-binding domain-containing protein	89.7	46.6	36.1
MGA_687	LOCUS_06710	sequence01:706126..706602(+)	partial			WP_011836504.1	phosphodiester glycosidase family protein	98.7	52.8	58.1
MGA_697	LOCUS_06810	sequence01:714205..714555(+)	partial			WP_003721449.1	PH domain-containing protein	98.3	71.2	43.5
MGA_727	LOCUS_07110	sequence01:752287..752967(-)	partial			WP_030862198.1	serine hydrolase	95.6	64.9	35.7
MGA_753	LOCUS_07370	sequence01:778219..778404(-)	internal_stop_codon	778417..778419(-)		WP_010906061.1	NADPH-dependent F420 reductase	98.4	31.4	73.3
MGA_754	LOCUS_07380	sequence01:778417..778800(-)	internal_stop_codon	778417..778419(-)		WP_010906061.1	NADPH-dependent F420 reductase	100.0	65.4	53.5
MGA_776	LOCUS_07590	sequence01:798716..800173(-)	partial			WP_002288371.1	DHH family phosphoesterase	97.1	71.7	56.3
MGA_813	LOCUS_07940	sequence01:831480..831905(+)	internal_stop_codon	831447..831449(+)		WP_011674750.1	DUF2087 domain-containing protein	97.9	56.0	53.2
MGA_839	LOCUS_08160	sequence01:860574..861866(+)	partial			WP_002287386.1	NlpC/P60 family protein	53.7	44.1	51.1
MGA_842	LOCUS_08190	sequence01:864065..865150(-)	frameshift		865115	WP_002287129.1	ABC transporter permease	96.1	70.0	46.6
MGA_843	LOCUS_08200	sequence01:865083..865529(-)	frameshift		865115	WP_002287129.1	ABC transporter permease	91.9	26.8	54.7
MGA_859	LOCUS_08360	sequence01:879701..880009(-)	partial			WP_011254116.1	site-specific integrase	99.0	28.9	60.4
MGA_865	LOCUS_08420	sequence01:887476..887679(-)	frameshift,internal_stop_codon	887475..887477(-),887739..887741(-)	887684,887303	WP_205010568.1	tyrosine-type recombinase/integrase	97.0	16.0	58.5
MGA_866	LOCUS_08430	sequence01:887739..888446(-)	frameshift,internal_stop_codon	887475..887477(-),887739..887741(-)	887684	WP_000219078.1	site-specific integrase	86.0	49.5	44.1
MGA_876	LOCUS_08530	sequence01:895519..896205(-)	frameshift		896270	WP_011948686.1	L-lactate permease	99.1	44.6	58.0
MGA_877	LOCUS_08540	sequence01:896133..897047(-)	frameshift		896270	WP_011948686.1	L-lactate permease	84.9	50.9	62.4
MGA_881	LOCUS_08580	sequence01:899777..900196(+)	partial			WP_003385509.1	GNAT family N-acetyltransferase	69.8	68.3	43.3
MGA_882	LOCUS_08590	sequence01:900434..900664(+)	partial			WP_002294687.1	hypothetical protein	65.8	63.5	56.0
MGA_883	LOCUS_08600	sequence01:900985..901158(-)	frameshift,internal_stop_codon	900985..900987(-)	900921	WP_002367773.1	type II toxin-antitoxin system RelE/ParE family toxin	93.0	59.6	62.3
MGA_884	LOCUS_08610	sequence01:901587..902057(+)	partial			WP_011862017.1	BglG family transcription antiterminator	94.9	21.3	40.5
MGA_891	LOCUS_08680	sequence01:907827..908195(-)	partial			WP_013390165.1	alpha/beta hydrolase	83.6	36.1	55.9
MGA_899	LOCUS_08760	sequence01:918113..918520(+)	partial			WP_003561810.1	IS30-like element ISLpl1 family transposase	88.9	38.8	88.3
MGA_911	LOCUS_08880	sequence01:932443..932706(+)	frameshift		932703	WP_002357899.1	ABC transporter substrate-binding protein	82.8	12.8	47.3
MGA_912	LOCUS_08890	sequence01:932715..934088(+)	frameshift		932703	WP_002357899.1	ABC transporter substrate-binding protein	99.1	84.4	50.2
MGA_915	LOCUS_08920	sequence01:936613..937032(+)	partial			WP_001251721.1	DUF1456 family protein	87.1	72.7	43.4
MGA_922	LOCUS_08990	sequence01:943434..943853(+)	partial			WP_011837300.1	helix-turn-helix transcriptional regulator	48.2	34.0	55.2
MGA_1028	LOCUS_10030	sequence01:1058887..1059705(+)	partial			WP_003724042.1	ABC transporter permease	85.3	61.7	40.1
MGA_1041	LOCUS_10160	sequence01:1072903..1073079(+)	partial			WP_002356740.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1053	LOCUS_10270	sequence01:1084470..1084670(+)	frameshift,internal_stop_codon	1084668..1084670(+)	1084691	WP_000219567.1	amidohydrolase family protein	84.8	13.6	44.6
MGA_1070	LOCUS_10430	sequence01:1103786..1104376(+)	partial			WP_011674709.1	C39 family peptidase	99.0	44.0	63.9
MGA_1080	LOCUS_10530	sequence01:1111163..1112191(+)	partial			WP_012775199.1	DUF2142 domain-containing protein	84.2	68.5	26.5
MGA_1081	LOCUS_10540	sequence01:1112777..1113259(+)	internal_stop_codon	1113257..1113259(+)		WP_011673997.1	IS5-like element ISLca3 family transposase	95.6	31.3	43.8
MGA_1082	LOCUS_10550	sequence01:1113287..1114213(+)	partial			WP_011108882.1	transposase	81.5	56.0	29.2
MGA_1085	LOCUS_10580	sequence01:1116408..1117364(+)	partial			WP_011837189.1	rhamnan synthesis F family protein	95.9	30.3	39.9
MGA_1086	LOCUS_10590	sequence01:1117388..1119472(+)	frameshift,internal_stop_codon	1117315..1117317(+),1117300..1117302(+),1117321..1117323(+)	1117341,1117247	WP_011837189.1	rhamnan synthesis F family protein	98.8	69.2	52.2
MGA_1087	LOCUS_10600	sequence01:1119477..1120436(+)	frameshift		1120376	WP_010905205.1	DUF2142 domain-containing protein	92.2	55.3	31.8
MGA_1139	LOCUS_11100	sequence01:1177545..1179926(+)	partial			WP_010706591.1	ABC transporter permease	68.9	63.1	44.6
MGA_1179	LOCUS_11500	sequence01:1222384..1223010(+)	frameshift		1222983	WP_002296400.1	UDP-N-acetylmuramate--L-alanine ligase	97.6	45.7	83.3
MGA_1180	LOCUS_11510	sequence01:1223021..1223719(+)	frameshift		1222989	WP_002296400.1	UDP-N-acetylmuramate--L-alanine ligase	99.1	51.8	78.3
MGA_1189	LOCUS_11600	sequence01:1232381..1232590(+)	frameshift		1232560	WP_002382286.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	87.0	23.3	71.7
MGA_1190	LOCUS_11610	sequence01:1232670..1233083(+)	frameshift		1232560	WP_002382286.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	98.5	52.3	52.6
MGA_1197	LOCUS_11680	sequence01:1240592..1240813(-)	partial			WP_002366175.1	hypothetical protein	78.1	25.9	52.6
MGA_1213	LOCUS_11820	sequence01:1252991..1253860(-)	frameshift		1253883	WP_000969590.1	Y-family DNA polymerase	93.8	61.7	51.6
MGA_1214	LOCUS_11830	sequence01:1253863..1254363(-)	frameshift		1253883	WP_011836626.1	Y-family DNA polymerase	97.6	39.7	46.8
MGA_1232	LOCUS_12000	sequence01:1274075..1275346(-)	partial			WP_002365661.1	LCP family protein	67.4	73.8	55.2
MGA_1277	LOCUS_12450	sequence01:1327110..1327331(+)	frameshift		1327313	WP_002297218.1	ISL3-like element ISEfa11 family transposase	100.0	16.9	60.3
MGA_1278	LOCUS_12460	sequence01:1327300..1327692(+)	frameshift		1327313,1327677	WP_224434404.1	ISL3 family transposase	94.6	28.5	76.4
MGA_1296	LOCUS_12630	sequence01:1346705..1347169(+)	internal_stop_codon	1347167..1347169(+)		WP_002295798.1	peptidylprolyl isomerase	74.7	45.5	67.8
MGA_1337	LOCUS_13030	sequence01:1391263..1391646(+)	partial			WP_011109539.1	group II intron reverse transcriptase/maturase	89.8	18.0	50.9
MGA_1341	LOCUS_13070	sequence01:1397900..1398358(+)	frameshift		1397709	WP_002390049.1	IS6-like element ISS1N family transposase	100.0	67.3	91.4
MGA_1342	LOCUS_13080	sequence01:1398355..1398633(-)	partial			WP_011035595.1	hypothetical protein	76.1	24.5	41.4
MGA_1345	LOCUS_13110	sequence01:1401185..1401451(-)	partial			WP_012546378.1	helix-turn-helix transcriptional regulator	84.1	58.5	43.4
MGA_1347	LOCUS_13130	sequence01:1401963..1402313(-)	partial			WP_011109507.1	abortive infection family protein	94.8	40.0	69.1
MGA_1349	LOCUS_13140	sequence01:1403301..1403831(-)	partial			WP_002288607.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	92.6	16.4	44.2
MGA_1351	LOCUS_13160	sequence01:1404690..1406081(-)	partial			WP_013390242.1	Ig-like domain-containing protein	85.7	22.3	51.5
MGA_1353	LOCUS_13180	sequence01:1406231..1406707(-)	frameshift,internal_stop_codon	1406231..1406233(-)	1406780	WP_013390242.1	Ig-like domain-containing protein	83.5	7.7	43.2
MGA_1354	LOCUS_13190	sequence01:1406769..1407350(-)	frameshift		1406783	WP_013390242.1	Ig-like domain-containing protein	83.4	8.9	44.7
MGA_1363	LOCUS_13280	sequence01:1413188..1414528(-)	partial			WP_129559156.1	LPXTG-anchored neuraminidase NanA	95.7	46.6	33.1
MGA_1372	LOCUS_13360	sequence01:1426403..1426990(-)	partial			WP_003242997.1	YdhK family protein	74.9	72.7	51.0
MGA_1377	LOCUS_13410	sequence01:1430937..1431368(-)	partial			WP_011249788.1	heavy metal translocating P-type ATPase	70.6	12.4	40.6
MGA_1378	LOCUS_13420	sequence01:1431352..1431711(-)	partial			WP_003705203.1	CopY/TcrY family copper transport repressor	66.4	53.4	32.9
MGA_1379	LOCUS_13430	sequence01:1431733..1432203(-)	partial			WP_002386635.1	TIGR01906 family membrane protein	82.7	60.4	41.4
MGA_1385	LOCUS_13480	sequence01:1436465..1436638(-)	partial			WP_002289113.1	metal-sulfur cluster assembly factor	100.0	50.0	84.2
MGA_1394	LOCUS_13550	sequence01:1446280..1447668(-)	partial			WP_011202675.1	DEAD/DEAH box helicase family protein	98.7	32.2	32.3
MGA_1408	LOCUS_13660	sequence01:1463998..1464984(+)	partial			WP_157860391.1	leucine-rich repeat protein	70.4	10.2	31.5
MGA_1425	LOCUS_13830	sequence01:1480320..1481042(-)	partial			WP_010906130.1	DNA internalization-related competence protein ComEC/Rec2	92.9	30.3	41.3
MGA_1437	LOCUS_13950	sequence01:1492581..1493162(-)	frameshift		1492616	WP_011475996.1	DNA alkylation repair protein	90.2	78.9	48.3
MGA_1446	LOCUS_14030	sequence01:1499019..1499486(+)	frameshift,internal_stop_codon	1499740..1499742(+),1498986..1498988(+)	1499708,1499429	WP_004270929.1	IS30 family transposase	94.8	42.9	42.2
MGA_1447	LOCUS_14040	sequence01:1499483..1499710(+)	frameshift,internal_stop_codon	1499740..1499742(+)	1499708,1499429	WP_004270929.1	IS30 family transposase	96.0	19.8	45.8
MGA_1450	LOCUS_14070	sequence01:1503720..1504166(-)	frameshift,internal_stop_codon	1504257..1504259(-)	1504284,1503758	WP_005812222.1	flotillin-like protein FloA	91.9	40.8	75.0
MGA_1451	LOCUS_14080	sequence01:1504264..1504497(-)	frameshift,internal_stop_codon	1504257..1504259(-)	1504528,1504284	WP_001830989.1	flotillin-like protein FloA	92.2	21.6	71.8
MGA_1454	LOCUS_14100	sequence01:1507063..1507260(+)	internal_stop_codon	1507054..1507056(+)		WP_002287225.1	IS30 family transposase	100.0	20.4	69.2
MGA_1484	LOCUS_14390	sequence01:1546313..1546828(-)	frameshift		1546842	WP_002287821.1	diadenylate cyclase CdaA	100.0	56.9	73.1
MGA_1485	LOCUS_14400	sequence01:1546825..1547205(-)	frameshift		1546842	WP_002287821.1	diadenylate cyclase CdaA	87.3	37.3	75.5
MGA_1486	LOCUS_14410	sequence01:1547372..1548691(-)	partial			WP_011674833.1	hypothetical protein	64.9	75.1	20.9
MGA_1501	LOCUS_14560	sequence01:1567266..1567469(-)	internal_stop_codon	1567518..1567520(-)		WP_002364185.1	ferrochelatase	74.6	16.0	62.0
MGA_1502	LOCUS_14570	sequence01:1567518..1567886(-)	frameshift,internal_stop_codon	1567517..1567519(-)	1567856,1567988	WP_002364185.1	ferrochelatase	90.2	35.1	55.5
MGA_1503	LOCUS_14580	sequence01:1567923..1568207(-)	frameshift		1567994,1567859	WP_011073218.1	ferrochelatase	77.7	22.3	54.8
MGA_1561	LOCUS_15160	sequence01:1628756..1629259(-)	partial			WP_011837294.1	DUF6287 domain-containing protein	61.7	24.0	46.6
MGA_1603	LOCUS_15580	sequence01:1669968..1670330(-)	partial			WP_002292862.1	GtrA family protein	95.0	73.1	46.5
MGA_1687	LOCUS_16410	sequence01:1747542..1747937(+)	frameshift,internal_stop_codon	1747930..1747932(+)	1747895	WP_002296502.1	site-specific integrase	90.8	31.0	60.5
MGA_1688	LOCUS_16420	sequence01:1747939..1748496(+)	frameshift,internal_stop_codon	1747930..1747932(+)	1748457,1747898	WP_002296502.1	site-specific integrase	93.5	45.1	65.3
MGA_1689	LOCUS_16430	sequence01:1748453..1748692(+)	frameshift		1748457	WP_002296502.1	site-specific integrase	96.2	19.9	77.6
MGA_1744	LOCUS_16970	sequence01:1802546..1802854(-)	partial			WP_010950969.1	restriction endonuclease	69.6	23.0	43.7
MGA_1747	LOCUS_17000	sequence01:1806640..1807098(+)	partial			WP_010905481.1	restriction endonuclease subunit S	100.0	37.1	59.9
MGA_1756	LOCUS_17090	sequence01:1819562..1820608(-)	partial			WP_011101137.1	DNA/RNA non-specific endonuclease	54.3	57.8	59.3
MGA_1763	LOCUS_17150	sequence01:1826100..1826516(+)	partial			WP_012775654.1	site-specific integrase	71.7	25.0	59.6
MGA_1800	LOCUS_17520	sequence01:1867287..1867949(+)	frameshift		1867113	WP_002386952.1	serine hydrolase domain-containing protein	100.0	56.7	30.0
MGA_1826	LOCUS_17770	sequence01:1893303..1893677(-)	frameshift		1893678	WP_000542446.1	aspartate-semialdehyde dehydrogenase	98.4	34.1	72.1
MGA_1827	LOCUS_17780	sequence01:1893559..1894356(-)	frameshift		1893672	WP_002381968.1	aspartate-semialdehyde dehydrogenase	88.3	65.9	75.6
MGA_1868	LOCUS_18190	sequence01:1946266..1946433(-)	partial			WP_002286607.1	sigma-54-dependent transcriptional regulator	89.1	5.4	55.1
MGA_1869	LOCUS_18200	sequence01:1946402..1946584(-)	partial			WP_003722198.1	sigma-54-dependent transcriptional regulator	83.3	5.6	46.0
MGA_1880	LOCUS_18290	sequence01:1955771..1956493(+)	frameshift		1956472	WP_001557163.1	ISL3-like element IS1181 family transposase	89.6	49.7	37.9
MGA_1881	LOCUS_18300	sequence01:1956490..1957086(+)	frameshift		1956475	WP_014748778.1	ISL3-like element ISEfa5 family transposase	99.5	45.9	39.5
MGA_1906	LOCUS_18540	sequence01:1992467..1993759(-)	partial			WP_003899494.1	type III-A CRISPR-associated CARF protein Csm6	65.6	69.2	26.9
MGA_1910	LOCUS_18580	sequence01:1996376..1996798(-)	partial			WP_002917164.1	type III-A CRISPR-associated protein Csm2	67.1	50.0	33.0
MGA_1919	LOCUS_18670	sequence01:2008715..2010487(-)	partial			WP_011068390.1	glycosyl hydrolase 53 family protein	81.0	54.2	39.8
MGA_1933	LOCUS_18810	sequence01:2025168..2025767(+)	frameshift		2025710	WP_002289836.1	alpha/beta hydrolase-fold protein	87.9	70.0	62.9
MGA_1943	LOCUS_18910	sequence01:2035187..2035438(-)	partial			WP_003646590.1	imidazole glycerol phosphate synthase subunit HisF	98.8	32.5	65.9
MGA_1944	LOCUS_18920	sequence01:2035564..2036043(+)	frameshift,internal_stop_codon	2035549..2035551(+)	2035944	WP_011836638.1	tryptophan synthase subunit alpha	80.5	49.4	49.2
MGA_1957	LOCUS_19050	sequence01:2051667..2052659(+)	partial			WP_002295084.1	N-acetylmuramoyl-L-alanine amidase	63.6	68.6	41.4
MGA_1968	LOCUS_19160	sequence01:2060310..2060786(-)	frameshift		2060890	WP_002289219.1	ROK family protein	98.7	53.8	48.7
MGA_1969	LOCUS_19170	sequence01:2060873..2061172(-)	frameshift		2060884	WP_002361643.1	ROK family protein	92.9	31.5	47.8
MGA_1972	LOCUS_19200	sequence01:2064303..2064779(-)	partial			WP_012027282.1	carbohydrate ABC transporter permease	100.0	53.6	77.8
MGA_1980	LOCUS_19260	sequence01:2073853..2074152(-)	frameshift		2074169	WP_010906061.1	NADPH-dependent F420 reductase	79.8	41.4	72.2
MGA_1981	LOCUS_19270	sequence01:2074167..2074469(-)	frameshift		2074169	WP_010906061.1	NADPH-dependent F420 reductase	100.0	51.3	56.0
MGA_1983	LOCUS_19290	sequence01:2075618..2076289(-)	partial			WP_003973948.1	transglycosylase SLT domain-containing protein	28.7	30.7	46.6
MGA_1986	LOCUS_19320	sequence01:2079212..2079679(-)	frameshift,internal_stop_codon	2079703..2079705(-)	2079711	WP_164929417.1	NAD(+)--rifampin ADP-ribosyltransferase	98.7	63.2	55.1
MGA_1997	LOCUS_19420	sequence01:2089288..2089866(+)	internal_stop_codon	2089864..2089866(+),2089945..2089947(+)		WP_002354960.1	iron chelate uptake ABC transporter family permease subunit	100.0	61.0	50.0
MGA_1998	LOCUS_19430	sequence01:2089951..2090304(+)	partial			WP_002287908.1	siderophore ABC transporter substrate-binding protein	94.9	35.0	73.0
MGA_2003	LOCUS_19480	sequence01:2093762..2094223(-)	partial			WP_012775155.1	DNA repair protein RadC	88.2	59.3	40.0
MGA_2006	LOCUS_19510	sequence01:2096160..2097065(-)	frameshift		2097054	WP_000608644.1	IS1380-like element ISEcp1 family transposase	91.4	66.9	28.1
MGA_2008	LOCUS_19530	sequence01:2097645..2098901(+)	partial			WP_010905814.1	hypothetical protein	21.5	80.2	37.8
MGA_2011	LOCUS_19560	sequence01:2099726..2100181(+)	partial			WP_002311774.1	IS30 family transposase	90.1	42.6	64.0
MGA_2033	LOCUS_19770	sequence01:2122639..2123514(-)	partial			WP_002900658.1	cation diffusion facilitator family transporter	96.2	70.4	55.7
MGA_2036	LOCUS_19800	sequence01:2125270..2125545(-)	frameshift		2125553	WP_002355329.1	acyl-CoA synthetase	97.8	17.5	70.8
MGA_2037	LOCUS_19810	sequence01:2125542..2126789(-)	frameshift		2125553	WP_002355329.1	acyl-CoA synthetase	99.0	80.9	68.4
MGA_2040	LOCUS_19830	sequence01:2131229..2131438(+)	internal_stop_codon	2131436..2131438(+)		WP_061086363.1	IS6-like element IS1216 family transposase	91.3	32.3	54.8
MGA_2044	LOCUS_19860	sequence01:2136975..2137409(+)	partial			WP_004398494.1	cupin domain-containing protein	88.2	68.3	54.3
MGA_2050	LOCUS_19920	sequence01:2141901..2142074(-)	partial			WP_011222008.1	replication protein	91.2	23.7	69.2
MGA_2072	LOCUS_20120	sequence01:2159043..2159516(-)	partial			WP_003270539.1	GNAT family N-acetyltransferase	89.2	45.2	30.0
MGA_2077	LOCUS_20170	sequence01:2165375..2165725(-)	partial			WP_002294182.1	preprotein translocase subunit YajC	60.3	65.1	53.7
MGA_2080	LOCUS_20200	sequence01:2167971..2168693(-)	partial			WP_002289743.1	cation-translocating P-type ATPase	99.6	27.2	73.2
MGA_2081	LOCUS_20210	sequence01:2168672..2170480(-)	partial			WP_002355749.1	calcium-translocating P-type ATPase, PMCA-type	99.5	68.1	75.0
MGA_2117	LOCUS_20570	sequence01:2204487..2205356(-)	partial			WP_010966899.1	ABC transporter ATP-binding protein	84.8	74.1	48.6
MGA_2143	LOCUS_20830	sequence01:2236062..2237708(-)	partial			WP_010706701.1	autolysin	95.1	67.6	45.1
MGA_2161	LOCUS_20990	sequence02:9187..9474(+)	partial			WP_012775544.1	HAD family hydrolase	100.0	40.6	69.5
MGA_2162	LOCUS_21000	sequence02:9785..10552(+)	frameshift,internal_stop_codon	10551..10553(+)	9743,9607	WP_088792927.1	IS3-like element IS981 family transposase	100.0	68.9	96.1
MGA_2165	LOCUS_21020	sequence02:13284..13463(-)	frameshift		13628,13534	WP_002389872.1	hypothetical protein	100.0	41.8	98.3
MGA_2168	LOCUS_21040	sequence02:15472..15726(+)	frameshift,internal_stop_codon	15411..15413(+)	15461	WP_002287940.1	Y-family DNA polymerase	72.6	13.3	95.1
MGA_2175	LOCUS_21100	sequence02:21456..21986(-)	partial			WP_011016673.1	NAD(P)/FAD-dependent oxidoreductase	97.2	37.0	53.8
MGA_2180	LOCUS_21140	sequence02:25129..25374(-)	frameshift,internal_stop_codon	25572..25574(-)	25406,25151	WP_002390049.1	IS6-like element ISS1N family transposase	91.4	32.7	98.6
MGA_2185	LOCUS_21180	sequence02:28550..28678(-)	partial			WP_002287933.1	type II toxin-antitoxin system death-on-curing family toxin	100.0	30.7	100.0
MGA_2188	LOCUS_21200	sequence02:30163..31014(-)	frameshift		30183	WP_003658355.1	sensor histidine kinase	99.3	76.3	40.9
MGA_2195	LOCUS_21270	sequence02:40686..41081(-)	partial			WP_002289293.1	dihydroxyacetone kinase subunit DhaL	99.2	64.7	83.8
MGA_2200	LOCUS_21310	sequence02:45755..46108(-)	internal_stop_codon	46232..46234(-),46109..46111(-)		WP_001059647.1	ISL3 family transposase	81.2	21.9	37.5
MGA_2201	LOCUS_21320	sequence02:46232..47083(-)	internal_stop_codon	46232..46234(-),46109..46111(-)		WP_001059647.1	ISL3 family transposase	97.5	63.2	43.5
MGA_2205	LOCUS_21360	sequence03:1440..1808(+)	partial			WP_211478206.1	type IA DNA topoisomerase	98.4	16.8	61.7
MGA_2213	LOCUS_21430	sequence03:8291..9976(-)	frameshift		10001	WP_002209226.1	cation-transporting P-type ATPase	99.1	62.4	48.7
MGA_2214	LOCUS_21440	sequence03:9990..10931(-)	frameshift		10001	WP_019080571.1	cation-transporting P-type ATPase	98.4	34.1	50.0
MGA_2215	LOCUS_21450	sequence03:11315..11737(-)	frameshift,internal_stop_codon	11774..11776(-)	11320,11308	WP_002387108.1	voltage-gated chloride channel family protein	98.6	32.8	42.8
MGA_2216	LOCUS_21460	sequence03:11980..12246(+)	partial			WP_011861362.1	C40 family peptidase	63.6	7.8	44.6
MGA_2217	LOCUS_21470	sequence03:12253..12552(+)	partial			WP_002287871.1	IS256 family transposase	88.9	22.6	88.6
MGA_2232	LOCUS_21610	sequence03:26816..27238(+)	partial			WP_002326704.1	IS982-like element ISEfm1 family transposase	100.0	46.4	100.0
MGA_2235	LOCUS_21640	sequence03:29373..30125(-)	partial			WP_002358661.1	LPXTG cell wall anchor domain-containing protein	35.6	81.7	79.8
MGA_2244	LOCUS_21730	sequence03:37601..38707(-)	partial			WP_000769868.1	bifunctional lysozyme/C40 family peptidase	52.7	59.5	45.7
MGA_2252	LOCUS_21810	sequence03:45122..45814(-)	partial			WP_011241757.1	MobQ family relaxase	98.3	32.8	42.5
MGA_2263	LOCUS_21910	sequence03:51974..52303(-)	partial			WP_002334978.1	AAA family ATPase	99.1	36.2	94.4
MGA_2264	LOCUS_21920	sequence03:52290..52589(+)	partial			WP_002287920.1	IS6-like element IS1216 family transposase	99.0	43.4	98.0
MGA_2271	LOCUS_21990	sequence03:63375..63737(-)	partial			WP_025481136.1	type IA DNA topoisomerase	95.0	15.5	65.8
MGA_2274	LOCUS_22020	sequence03:65751..66074(-)	internal_stop_codon	66096..66098(-)		WP_011241777.1	recombinase family protein	100.0	55.2	94.4
MGA_2275	LOCUS_22030	sequence03:66096..66335(-)	internal_stop_codon	66096..66098(-)		WP_011674185.1	recombinase family protein	100.0	40.5	77.2
MGA_2277	LOCUS_22050	sequence03:66938..67168(-)	partial			WP_004194196.1	PadR family transcriptional regulator	78.9	58.3	51.7
MGA_2278	LOCUS_22060	sequence03:67230..67508(-)	frameshift		67513	WP_002387331.1	FAD-dependent oxidoreductase	84.8	14.2	66.7
MGA_2279	LOCUS_22070	sequence03:67439..67615(-)	frameshift		67513	WP_002387331.1	FAD-dependent oxidoreductase	58.6	6.2	82.4
MGA_2287	LOCUS_22110	sequence05:490..972(+)	frameshift		951	WP_003700976.1	ATP-binding cassette domain-containing protein	95.0	70.0	50.0
MGA_2288	LOCUS_22120	sequence05:956..1144(+)	frameshift		951	WP_000166987.1	iron ABC transporter ATP-binding protein FetA	100.0	28.4	42.2
MGA_2292	LOCUS_22150	sequence08:54..596(+)	frameshift,internal_stop_codon	594..596(+)	623	WP_141741171.1	IS3 family transposase	92.2	34.2	51.5
MGA_2293	LOCUS_22160	sequence08:644..1477(+)	frameshift,internal_stop_codon	594..596(+)	623	WP_141741171.1	IS3 family transposase	97.1	56.7	60.2
MGA_2294	LOCUS_22170	sequence09:1..1127(+)	partial			WP_002298755.1	primase C-terminal domain-containing protein	100.0	74.9	96.3
MGA_2297	LOCUS_22180	sequence10:96..647(+)	frameshift		163	WP_011475832.1	IS3 family transposase	82.0	68.9	36.6
MGA_2300	LOCUS_22200	sequence12:675..1415(+)	partial			WP_002285820.1	ISL3 family transposase	87.0	53.4	71.5
MGA_2309	LOCUS_22250	sequence18:212..655(+)	frameshift		44	WP_002263020.1	DNA adenine methylase	97.3	49.5	48.3
MGA_2319	LOCUS_22290	sequence23:390..1058(-)	frameshift,internal_stop_codon	390..392(-)	1086	WP_009310015.1	IS3-like element ISKpn38 family transposase	99.5	43.3	49.8
MGA_2336	LOCUS_22340	sequence35:146..784(+)	frameshift		77	WP_128721742.1	IS3 family transposase	99.5	56.3	93.8
MGA_2337	LOCUS_22350	sequence36:56..442(-)	internal_stop_codon	467..469(-)		WP_002342378.1	IS6 family transposase	100.0	83.7	92.2
MGA_2338	LOCUS_22360	sequence36:467..739(-)	internal_stop_codon	467..469(-)		WP_061086363.1	IS6-like element IS1216 family transposase	100.0	39.8	96.7
MGA_2339	LOCUS_22370	sequence37:70..>765(-)	partial			WP_002296127.1	IS66 family transposase	98.7	44.3	78.5
MGA_2340	LOCUS_22380	sequence38:1..756(+)	partial			WP_011101804.1	MucBP domain-containing protein	53.4	15.2	35.2
MGA_2343	LOCUS_22390	sequence40:184..498(+)	frameshift		188,492	WP_003601979.1	recombinase family protein	77.9	37.0	37.0
MGA_2349	LOCUS_22400	sequence45:1..594(+)	partial			WP_002297218.1	ISL3-like element ISEfa11 family transposase	100.0	45.7	72.6
