# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_26	LOCUS_00250	sequence01:25910..26251(+)	partial			WP_002263573.1	IS3 family transposase	99.1	40.3	83.0
MGA_68	LOCUS_00660	sequence01:69174..69401(+)	internal_stop_codon	69105..69107(+)		WP_003642392.1	L,D-transpeptidase	97.3	33.8	44.6
MGA_84	LOCUS_00810	sequence01:82475..84358(+)	partial			WP_000796568.1	heavy metal translocating P-type ATPase	93.8	73.7	49.9
MGA_85	LOCUS_00820	sequence01:84676..84834(+)	frameshift		84674,84659	WP_011675022.1	multidrug efflux SMR transporter	98.1	48.1	51.0
MGA_91	LOCUS_00880	sequence01:90501..91580(+)	partial			WP_010774225.1	DUF6056 family protein	98.9	61.4	25.8
MGA_109	LOCUS_01050	sequence01:111510..112052(+)	internal_stop_codon	111474..111476(+),112050..112052(+)		WP_002287391.1	YebC/PmpR family DNA-binding transcriptional regulator	99.4	74.2	62.0
MGA_125	LOCUS_01210	sequence01:127472..128167(+)	internal_stop_codon	128165..128167(+)		WP_011837496.1	ABC transporter ATP-binding protein	98.7	81.7	56.6
MGA_150	LOCUS_01460	sequence01:154920..155615(+)	internal_stop_codon	154866..154868(+),155613..155615(+)		WP_001093389.1	S8 family serine peptidase	99.1	14.6	54.3
MGA_151	LOCUS_01470	sequence01:155667..156293(+)	internal_stop_codon	155613..155615(+),156291..156293(+)		WP_011837426.1	S8 family serine peptidase	100.0	13.8	58.2
MGA_152	LOCUS_01480	sequence01:156354..156959(+)	internal_stop_codon	156957..156959(+),156291..156293(+),157044..157046(+),157176..157178(+)		WP_001093389.1	S8 family serine peptidase	94.5	12.7	48.7
MGA_153	LOCUS_01490	sequence01:157287..157535(+)	frameshift,internal_stop_codon	157044..157046(+),157176..157178(+)	157484	WP_001093389.1	S8 family serine peptidase	78.0	4.0	39.1
MGA_154	LOCUS_01500	sequence01:157511..158233(+)	frameshift		157484,158141	WP_001093389.1	S8 family serine peptidase	86.2	13.4	36.7
MGA_155	LOCUS_01510	sequence01:158233..158847(+)	frameshift		158164	WP_011836870.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	49.5	3.3	36.6
MGA_176	LOCUS_01720	sequence01:181767..182483(+)	frameshift		182510,182462	WP_002273870.1	type I pullulanase	98.3	30.4	58.1
MGA_177	LOCUS_01730	sequence01:182437..183933(+)	frameshift		183920,182513,183945,182462	WP_002273870.1	type I pullulanase	93.2	60.2	70.5
MGA_182	LOCUS_01780	sequence01:189899..190630(+)	frameshift,internal_stop_codon	190664..190666(+),189787..189789(+)	190609,190549,189855	WP_002262947.1	glycogen/starch/alpha-glucan phosphorylase	90.9	27.7	81.0
MGA_183	LOCUS_01790	sequence01:190674..191177(+)	frameshift,internal_stop_codon	190664..190666(+),191447..191449(+),191177..191179(+)	190552,190609	WP_002262947.1	glycogen/starch/alpha-glucan phosphorylase	99.4	20.8	84.3
MGA_184	LOCUS_01800	sequence01:191238..191447(+)	internal_stop_codon	191445..191447(+),191175..191177(+)		WP_002262947.1	glycogen/starch/alpha-glucan phosphorylase	98.6	8.5	73.5
MGA_185	LOCUS_01810	sequence01:191550..192179(+)	internal_stop_codon	191445..191447(+)		WP_002262947.1	glycogen/starch/alpha-glucan phosphorylase	99.5	26.1	84.6
MGA_237	LOCUS_02330	sequence01:249310..249756(+)	partial			WP_012583010.1	MarR family transcriptional regulator	70.9	71.7	32.4
MGA_243	LOCUS_02390	sequence01:256074..257144(+)	partial			WP_000257565.1	dihydrolipoamide acetyltransferase	95.2	72.7	65.1
MGA_245	LOCUS_02410	sequence01:258991..259422(-)	frameshift,internal_stop_codon	259589..259591(-)	259441	WP_010969981.1	DMT family transporter	88.8	45.2	32.3
MGA_250	LOCUS_02460	sequence01:264497..265132(+)	frameshift		265078	WP_011101955.1	DUF3737 family protein	92.9	68.1	55.6
MGA_251	LOCUS_02470	sequence01:265129..265344(+)	frameshift		265078	WP_011101955.1	DUF3737 family protein	94.4	23.3	52.2
MGA_252	LOCUS_02480	sequence01:265348..266337(+)	internal_stop_codon	266335..266337(+)		WP_011101954.1	pyridoxal phosphate-dependent aminotransferase	99.1	83.6	50.9
MGA_257	LOCUS_02530	sequence01:268201..268998(+)	partial			WP_011109290.1	MATE family efflux transporter	64.5	37.2	26.7
MGA_272	LOCUS_02680	sequence01:282312..282737(+)	frameshift,internal_stop_codon	282286..282288(+)	282315	WP_011202637.1	carboxymuconolactone decarboxylase family protein	97.9	50.0	60.1
MGA_278	LOCUS_02740	sequence01:286377..286598(+)	frameshift		286390	WP_002367385.1	potassium channel family protein	84.9	48.8	61.3
MGA_297	LOCUS_02920	sequence01:305895..306314(-)	frameshift		305906	WP_002263217.1	LysR family transcriptional regulator	98.6	45.4	94.2
MGA_299	LOCUS_02930	sequence01:308485..309336(+)	partial			WP_000064987.1	LCP family protein	99.3	57.5	63.3
MGA_308	LOCUS_03020	sequence01:316637..317605(+)	partial			WP_003243644.1	glycosyltransferase	76.4	73.0	31.7
MGA_311	LOCUS_03050	sequence01:319900..320964(+)	partial			WP_011475868.1	sugar transferase	70.1	71.9	40.6
MGA_315	LOCUS_03090	sequence01:323736..324332(+)	partial			WP_011475860.1	acyltransferase family protein	84.3	47.9	26.4
MGA_317	LOCUS_03100	sequence01:326489..327352(-)	partial			WP_012775391.1	class C sortase	73.9	78.8	33.9
MGA_319	LOCUS_03120	sequence01:328179..329015(-)	partial			WP_000850398.1	class C sortase	78.1	74.1	58.1
MGA_324	LOCUS_03170	sequence01:337403..337594(+)	partial			WP_000020412.1	hypothetical protein	100.0	66.3	61.9
MGA_375	LOCUS_03680	sequence01:390336..391124(-)	frameshift		391089	WP_002262247.1	ABC transporter permease	95.4	47.4	54.0
MGA_376	LOCUS_03690	sequence01:391072..391536(-)	frameshift		391089	WP_002262247.1	ABC transporter permease	97.4	28.7	44.0
MGA_393	LOCUS_03860	sequence01:408356..408769(-)	partial			WP_001056394.1	TVP38/TMEM64 family protein	95.6	64.0	41.2
MGA_399	LOCUS_03910	sequence01:414668..416068(+)	partial			WP_093953830.1	esterase	35.2	18.4	29.3
MGA_402	LOCUS_03940	sequence01:417238..418071(+)	partial			WP_011861372.1	4Fe-4S binding protein	63.2	67.9	33.3
MGA_408	LOCUS_04000	sequence01:423021..423377(+)	frameshift		422943	WP_005807782.1	NUDIX domain-containing protein	83.1	57.8	36.2
MGA_410	LOCUS_04020	sequence01:423899..424165(-)	partial			WP_109289924.1	IS3 family transposase	81.8	16.0	84.7
MGA_413	LOCUS_04050	sequence01:425405..425716(+)	partial			WP_002911924.1	Rgg/GadR/MutR family transcriptional regulator	79.6	28.0	54.9
MGA_415	LOCUS_04070	sequence01:425920..426546(+)	frameshift		426528,426531,426534	WP_002352268.1	glucosyltransferase GtfB	99.0	14.1	43.8
MGA_417	LOCUS_04090	sequence01:426875..427321(+)	frameshift		427306	WP_003393633.1	CPBP family intramembrane metalloprotease	62.2	55.1	46.7
MGA_419	LOCUS_04110	sequence01:429142..429432(+)	frameshift,internal_stop_codon	429640..429642(+),429133..429135(+)	429393	WP_000453282.1	dihydroxyacetone kinase subunit DhaL	86.5	42.7	54.2
MGA_420	LOCUS_04120	sequence01:429435..429641(+)	frameshift,internal_stop_codon	429640..429642(+)	429396	WP_012027842.1	dihydroxyacetone kinase subunit DhaL	100.0	35.6	50.0
MGA_428	LOCUS_04200	sequence01:433427..433675(+)	frameshift,internal_stop_codon	433709..433711(+),433673..433675(+)	433425	WP_010989484.1	AbiH family protein	91.5	24.4	38.7
MGA_429	LOCUS_04210	sequence01:434053..435837(+)	frameshift		435777	WP_003244282.1	class I SAM-dependent DNA methyltransferase	95.5	64.4	60.1
MGA_430	LOCUS_04220	sequence01:435858..436730(+)	frameshift		435780	WP_003244282.1	class I SAM-dependent DNA methyltransferase	95.5	30.5	52.0
MGA_436	LOCUS_04280	sequence01:443065..443553(+)	partial			WP_011922396.1	DUF3307 domain-containing protein	99.4	67.5	57.8
MGA_450	LOCUS_04420	sequence01:456296..456799(-)	frameshift,internal_stop_codon	456296..456298(-)	456821	WP_010922318.1	DUF3307 domain-containing protein	99.4	69.3	60.8
MGA_451	LOCUS_04430	sequence01:456792..457004(-)	frameshift		456821	WP_010922318.1	DUF3307 domain-containing protein	84.3	24.8	62.7
MGA_452	LOCUS_04440	sequence01:457019..457450(-)	frameshift,internal_stop_codon	457018..457020(-)	457605	WP_002989760.1	SatD family protein	96.5	62.4	60.1
MGA_459	LOCUS_04510	sequence01:464142..464360(-)	frameshift		464143,464359	WP_003568093.1	hypothetical protein	98.6	65.7	70.4
MGA_468	LOCUS_04600	sequence01:475526..476086(+)	frameshift		475439	WP_002262266.1	phosphopantothenate--cysteine ligase	100.0	81.6	64.5
MGA_474	LOCUS_04660	sequence01:478608..479657(+)	internal_stop_codon	478545..478547(+)		WP_011860984.1	DUF4041 domain-containing protein	87.7	56.1	43.8
MGA_478	LOCUS_04700	sequence01:482280..483239(+)	frameshift		483194	WP_011101076.1	tyrosine-type recombinase/integrase	94.4	76.5	27.5
MGA_479	LOCUS_04710	sequence01:483188..483439(+)	frameshift		483194	WP_011101076.1	tyrosine-type recombinase/integrase	75.9	15.8	42.9
MGA_513	LOCUS_05020	sequence01:520476..520916(+)	partial			WP_109289924.1	IS3 family transposase	88.4	28.7	70.5
MGA_516	LOCUS_05040	sequence01:523939..524517(-)	frameshift,internal_stop_codon	524517..524519(-),524604..524606(-)	524558	WP_000625941.1	alanine racemase	100.0	59.8	58.0
MGA_517	LOCUS_05050	sequence01:524604..524846(-)	frameshift,internal_stop_codon	524517..524519(-),524604..524606(-)	524865,524558	WP_000625941.1	alanine racemase	95.0	20.8	61.8
MGA_518	LOCUS_05060	sequence01:524839..524958(-)	frameshift,internal_stop_codon	524604..524606(-)	524865,524558	WP_000625941.1	alanine racemase	92.3	9.8	77.8
MGA_520	LOCUS_05080	sequence01:525588..526130(+)	frameshift		526064	WP_012544973.1	IS110 family transposase	83.3	36.5	34.9
MGA_521	LOCUS_05090	sequence01:526031..526534(+)	frameshift		526517,526055	WP_011015895.1	IS110-like element ISFnu4 family transposase	92.2	41.2	39.8
MGA_522	LOCUS_05100	sequence01:526528..526746(+)	frameshift		526516	WP_011015895.1	IS110-like element ISFnu4 family transposase	98.6	18.2	48.6
MGA_523	LOCUS_05110	sequence01:526949..527302(+)	partial			WP_109289924.1	IS3 family transposase	74.4	19.4	69.0
MGA_524	LOCUS_05120	sequence01:527265..527714(+)	frameshift		527699	WP_120719018.1	IS3 family transposase	98.0	32.5	78.8
MGA_525	LOCUS_05130	sequence01:527723..527872(+)	frameshift		527699	WP_115283723.1	IS3 family transposase	95.9	10.4	95.7
MGA_529	LOCUS_05160	sequence01:529981..530259(-)	partial			WP_010922362.1	Spx/MgsR family RNA polymerase-binding regulatory protein	100.0	68.7	89.1
MGA_532	LOCUS_05190	sequence01:532343..533281(-)	partial			WP_002262189.1	DUF2130 domain-containing protein	100.0	74.9	84.3
MGA_541	LOCUS_05270	sequence01:541881..542117(-)	partial			WP_000910184.1	thiaminase II	97.4	33.6	38.2
MGA_542	LOCUS_05280	sequence01:542122..542331(-)	partial			WP_000910184.1	thiaminase II	97.1	29.6	46.3
MGA_543	LOCUS_05290	sequence01:542416..542718(-)	frameshift,internal_stop_codon	542910..542912(-),542730..542732(-),542415..542417(-)	542951	WP_011922263.1	HAD hydrolase-like protein	100.0	46.5	36.0
MGA_546	LOCUS_05320	sequence01:543682..543963(-)	frameshift		544019	WP_000181409.1	energy coupling factor transporter S component ThiW	96.8	47.9	54.4
MGA_547	LOCUS_05330	sequence01:544017..544256(-)	frameshift		544019	WP_000181409.1	energy coupling factor transporter S component ThiW	100.0	42.0	64.6
MGA_554	LOCUS_05400	sequence01:551871..552200(-)	internal_stop_codon	552213..552215(-)		WP_012774938.1	Cof-type HAD-IIB family hydrolase	95.4	38.2	44.8
MGA_555	LOCUS_05410	sequence01:552213..552692(-)	internal_stop_codon	552213..552215(-)		WP_011836481.1	Cof-type HAD-IIB family hydrolase	73.0	42.0	42.2
MGA_557	LOCUS_05420	sequence01:554135..555199(-)	partial			WP_001247520.1	GBS Bsp-like repeat-containing protein	76.6	31.5	52.6
MGA_559	LOCUS_05430	sequence01:557606..558301(-)	internal_stop_codon	557474..557476(-),557606..557608(-),558458..558460(-)		WP_003546652.1	family 1 glycosylhydrolase	100.0	47.3	66.8
MGA_560	LOCUS_05440	sequence01:558458..558922(-)	internal_stop_codon	558458..558460(-)		WP_003546652.1	family 1 glycosylhydrolase	98.1	30.3	63.6
MGA_562	LOCUS_05460	sequence01:559672..559878(-)	partial			WP_005168914.1	Cof-type HAD-IIB family hydrolase	91.2	23.0	54.8
MGA_563	LOCUS_05470	sequence01:559984..560496(-)	internal_stop_codon	559984..559986(-)		WP_012774938.1	Cof-type HAD-IIB family hydrolase	100.0	62.9	33.5
MGA_578	LOCUS_05620	sequence01:572564..573727(-)	frameshift		573963	WP_002262843.1	beta-glucoside-specific PTS transporter subunit IIABC	99.7	59.5	57.3
MGA_579	LOCUS_05630	sequence01:573880..574452(-)	frameshift		573963	WP_002262843.1	beta-glucoside-specific PTS transporter subunit IIABC	85.8	25.3	72.6
MGA_581	LOCUS_05650	sequence01:574924..575481(-)	frameshift,internal_stop_codon	574924..574926(-)	575488	WP_002264303.1	PRD domain-containing protein	98.9	65.4	65.6
MGA_582	LOCUS_05660	sequence01:575459..575629(-)	frameshift		575488	WP_002264303.1	PRD domain-containing protein	80.4	16.1	73.3
MGA_599	LOCUS_05820	sequence01:591001..591528(+)	partial			WP_150880979.1	ISL3 family transposase	100.0	42.9	76.6
MGA_653	LOCUS_06350	sequence01:642089..642619(-)	partial			WP_002990206.1	glycoside hydrolase family 73 protein	85.2	63.8	66.0
MGA_656	LOCUS_06380	sequence01:645230..645967(-)	internal_stop_codon	646067..646069(-)		WP_012803888.1	aldo/keto reductase	100.0	72.6	61.1
MGA_657	LOCUS_06390	sequence01:646067..646216(-)	internal_stop_codon	646067..646069(-)		WP_011267240.1	aldo/keto reductase	93.9	13.6	63.0
MGA_701	LOCUS_06830	sequence01:691699..692058(-)	partial			WP_000124839.1	50S ribosomal protein L20	74.8	74.8	96.6
MGA_709	LOCUS_06910	sequence01:696319..696906(-)	partial			WP_002263334.1	DUF6287 domain-containing protein	64.6	65.1	54.3
MGA_710	LOCUS_06920	sequence01:696922..697818(-)	partial			WP_002263335.1	GBS Bsp-like repeat-containing protein	98.7	30.0	65.4
MGA_725	LOCUS_07060	sequence01:717683..718720(-)	partial			WP_002261979.1	glycosyltransferase	77.4	57.2	57.7
MGA_734	LOCUS_07150	sequence01:726835..727011(-)	partial			WP_000048058.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_750	LOCUS_07300	sequence01:746608..747108(+)	partial			WP_015943945.1	ferritin family protein	98.2	41.6	64.4
MGA_752	LOCUS_07320	sequence01:747891..748223(+)	frameshift,internal_stop_codon	747849..747851(+),748326..748328(+)	748217	WP_002261956.1	ATP-binding cassette domain-containing protein	98.2	21.6	45.4
MGA_753	LOCUS_07330	sequence01:748373..748549(+)	frameshift,internal_stop_codon	748326..748328(+)	748220,748541	WP_002261956.1	ATP-binding cassette domain-containing protein	93.1	10.8	51.9
MGA_754	LOCUS_07340	sequence01:748530..748844(+)	frameshift,internal_stop_codon	748325..748327(+),748842..748844(+)	748540	WP_002261956.1	ATP-binding cassette domain-containing protein	96.2	20.0	56.0
MGA_762	LOCUS_07410	sequence01:755620..756156(-)	internal_stop_codon	755620..755622(-)		WP_120719018.1	IS3 family transposase	100.0	39.6	71.9
MGA_775	LOCUS_07530	sequence01:764178..764414(-)	frameshift		764448	WP_000914581.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	100.0	14.4	61.5
MGA_782	LOCUS_07600	sequence01:772276..772842(+)	partial			WP_011674335.1	Ltp family lipoprotein	75.5	65.0	60.1
MGA_804	LOCUS_07820	sequence01:796518..797018(-)	partial			WP_199567761.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	75.3	5.3	31.5
MGA_805	LOCUS_07830	sequence01:797138..799717(-)	internal_stop_codon	799943..799945(-)		WP_164925492.1	pullulanase	99.2	40.6	65.7
MGA_806	LOCUS_07840	sequence01:799943..800704(-)	internal_stop_codon	799943..799945(-)		WP_164925492.1	pullulanase	100.0	8.8	31.6
MGA_834	LOCUS_08110	sequence01:825591..825884(-)	partial			WP_000022160.1	site-specific integrase	95.9	24.5	62.8
MGA_835	LOCUS_08120	sequence01:826165..826509(+)	frameshift		826482	WP_000122833.1	MobV family relaxase	81.6	22.2	78.5
MGA_836	LOCUS_08130	sequence01:826502..826840(+)	frameshift		826792,826482	WP_000122833.1	MobV family relaxase	87.5	23.4	32.7
MGA_837	LOCUS_08140	sequence01:826824..827156(+)	frameshift		826801	WP_000122833.1	MobV family relaxase	97.3	25.6	58.9
MGA_838	LOCUS_08150	sequence01:827682..827870(+)	partial			WP_000130119.1	hypothetical protein	100.0	39.7	71.0
MGA_841	LOCUS_08180	sequence01:829081..829299(-)	frameshift,internal_stop_codon	829356..829358(-)	829424	WP_120719025.1	IS3 family transposase	98.6	15.8	87.3
MGA_851	LOCUS_08270	sequence01:838315..840114(+)	partial			WP_002352208.1	2-hydroxyacyl-CoA dehydratase	96.5	40.3	88.4
MGA_852	LOCUS_08280	sequence01:840107..842695(+)	partial			WP_002352208.1	2-hydroxyacyl-CoA dehydratase	99.2	59.8	86.5
MGA_884	LOCUS_08600	sequence01:878188..878853(+)	frameshift		878198	WP_011074540.1	peptidoglycan recognition family protein	100.0	67.3	57.5
MGA_928	LOCUS_09030	sequence01:919157..919732(+)	internal_stop_codon	919730..919732(+)		WP_002262804.1	oleate hydratase	100.0	32.4	81.2
MGA_929	LOCUS_09040	sequence01:919742..920434(+)	internal_stop_codon	919730..919732(+),920432..920434(+)		WP_002262804.1	oleate hydratase	100.0	39.0	73.9
MGA_930	LOCUS_09050	sequence01:920483..920956(+)	frameshift,internal_stop_codon	920432..920434(+)	920866	WP_002262804.1	oleate hydratase	83.4	22.2	84.0
MGA_931	LOCUS_09060	sequence01:920992..922014(-)	partial			WP_010964130.1	pectate lyase	98.2	71.7	34.2
MGA_950	LOCUS_09250	sequence01:940886..941122(-)	partial			WP_002985700.1	preprotein translocase subunit SecG	74.4	74.4	81.0
MGA_958	LOCUS_09330	sequence01:946828..947163(-)	frameshift,internal_stop_codon	946828..946830(-),947196..947198(-)	947348	WP_003234692.1	alpha-amylase	61.3	10.5	42.0
MGA_959	LOCUS_09340	sequence01:947292..948296(-)	frameshift,internal_stop_codon	947196..947198(-),948447..948449(-),948579..948581(-)	947348	WP_003234692.1	alpha-amylase	93.7	48.0	49.5
MGA_960	LOCUS_09350	sequence01:948579..948827(-)	internal_stop_codon	948447..948449(-),948579..948581(-)		WP_003234692.1	alpha-amylase	98.8	12.3	50.6
MGA_1023	LOCUS_09970	sequence01:1004747..1005700(-)	partial			WP_010706863.1	DUF6287 domain-containing protein	39.1	48.5	36.8
MGA_1024	LOCUS_09980	sequence01:1005719..1006897(-)	partial			WP_011837294.1	DUF6287 domain-containing protein	31.4	27.1	34.1
MGA_1029	LOCUS_10030	sequence01:1011116..1012390(-)	internal_stop_codon	1012409..1012411(-)		WP_003643065.1	glycoside-pentoside-hexuronide (GPH):cation symporter	99.5	65.8	52.2
MGA_1030	LOCUS_10040	sequence01:1012409..1013032(-)	internal_stop_codon	1012409..1012411(-)		WP_003643065.1	glycoside-pentoside-hexuronide (GPH):cation symporter	89.9	28.5	69.4
MGA_1034	LOCUS_10080	sequence01:1015686..1016381(-)	frameshift		1016425	WP_003051793.1	site-specific integrase	97.8	60.8	35.6
MGA_1035	LOCUS_10090	sequence01:1016333..1016815(-)	frameshift		1016413	WP_010905403.1	site-specific integrase	72.5	30.6	30.8
MGA_1063	LOCUS_10350	sequence01:1042534..1042974(+)	internal_stop_codon	1043078..1043080(+)		WP_109289924.1	IS3 family transposase	88.4	28.7	68.2
MGA_1064	LOCUS_10360	sequence01:1042913..1043080(+)	internal_stop_codon	1043078..1043080(+)		WP_120719018.1	IS3 family transposase	100.0	12.2	63.6
MGA_1066	LOCUS_10370	sequence01:1043344..1043685(+)	frameshift,internal_stop_codon	1043078..1043080(+)	1043260	WP_002263573.1	IS3 family transposase	99.1	40.3	83.0
MGA_1099	LOCUS_10700	sequence01:1079317..1080186(-)	partial			WP_009966754.1	GIY-YIG nuclease family protein	93.1	66.8	31.4
MGA_1106	LOCUS_10770	sequence01:1086919..1087305(-)	frameshift		1087316	WP_000128173.1	cysteine hydrolase family protein	98.4	72.8	42.9
MGA_1148	LOCUS_11180	sequence01:1126376..1126762(-)	frameshift,internal_stop_codon	1126790..1126792(-),1126313..1126315(-)	1126417	WP_002265226.1	MATE family efflux transporter	89.8	27.0	56.5
MGA_1149	LOCUS_11190	sequence01:1126790..1127530(-)	internal_stop_codon	1126790..1126792(-)		WP_002265226.1	MATE family efflux transporter	93.5	54.0	60.9
MGA_1162	LOCUS_11320	sequence01:1138147..1143072(-)	partial			WP_010989452.1	class 1 internalin InlF	8.8	17.8	27.0
MGA_1171	LOCUS_11410	sequence01:1152069..1152959(-)	partial			WP_011016071.1	carboxylating nicotinate-nucleotide diphosphorylase	66.6	68.9	60.9
MGA_1200	LOCUS_11700	sequence01:1181825..1182145(-)	frameshift,internal_stop_codon	1182241..1182243(-),1182253..1182255(-),1182256..1182258(-)	1182141	WP_002264906.1	CHAP domain-containing protein	96.2	47.9	63.7
MGA_1201	LOCUS_11710	sequence01:1182256..1182513(-)	frameshift,internal_stop_codon	1182241..1182243(-),1182253..1182255(-),1182256..1182258(-)	1182144	WP_002264906.1	CHAP domain-containing protein	85.9	33.2	45.2
MGA_1227	LOCUS_11960	sequence01:1213201..1213797(-)	partial			WP_000919740.1	D-alanyl-lipoteichoic acid biosynthesis protein DltD	98.0	46.2	61.3
MGA_1228	LOCUS_11970	sequence01:1213833..1215116(+)	partial			WP_012048273.1	glucoamylase family protein	73.5	10.2	20.2
MGA_1229	LOCUS_11980	sequence01:1215733..1217547(+)	frameshift		1215583	WP_195978718.1	N,N'-diacetylchitobiose phosphorylase	100.0	75.2	75.0
MGA_1258	LOCUS_12270	sequence01:1242676..1243170(-)	partial			WP_012027929.1	hypothetical protein	70.1	74.2	62.6
MGA_1290	LOCUS_12590	sequence01:1285865..1286191(+)	frameshift		1286113	WP_002273717.1	trehalose operon repressor	76.9	35.0	66.3
MGA_1291	LOCUS_12600	sequence01:1286311..1286577(+)	frameshift		1286113	WP_002273717.1	trehalose operon repressor	96.6	35.9	78.8
MGA_1293	LOCUS_12620	sequence01:1287823..1288299(-)	partial			WP_011837257.1	isopeptide-forming domain-containing fimbrial protein	94.3	30.9	43.8
MGA_1296	LOCUS_12650	sequence01:1289919..1290149(-)	frameshift,internal_stop_codon	1289888..1289890(-),1289918..1289920(-)	1290208	WP_014917214.1	signal peptidase I	100.0	37.0	59.2
MGA_1329	LOCUS_12980	sequence01:1321099..1321428(+)	partial			WP_011837676.1	site-specific integrase	100.0	25.9	92.7
MGA_1336	LOCUS_13050	sequence01:1325369..1325587(-)	internal_stop_codon	1325651..1325653(-)		WP_115283723.1	IS3 family transposase	97.2	15.6	90.0
MGA_1337	LOCUS_13060	sequence01:1325651..1326226(-)	frameshift,internal_stop_codon	1325649..1325651(-),1326423..1326425(-)	1326257,1326410	WP_115283723.1	IS3 family transposase	99.5	42.2	87.4
MGA_1338	LOCUS_13070	sequence01:1326184..1326372(-)	frameshift,internal_stop_codon	1326423..1326425(-)	1326410	WP_081026662.1	IS3 family transposase	90.3	23.9	55.4
MGA_1339	LOCUS_13080	sequence01:1326423..1326596(-)	frameshift,internal_stop_codon	1326657..1326659(-),1326423..1326425(-)	1326257,1326410	WP_115283723.1	IS3 family transposase	100.0	12.7	84.2
MGA_1353	LOCUS_13220	sequence01:1341505..1342074(-)	partial			WP_010922794.1	transglycosylase SLT domain-containing protein	60.3	55.9	62.3
MGA_1380	LOCUS_13480	sequence01:1370533..1370865(+)	partial			WP_000577652.1	helix-turn-helix transcriptional regulator	100.0	70.5	36.9
MGA_1445	LOCUS_14110	sequence02:44774..45151(-)	partial			WP_002894318.1	rod shape-determining protein MreD	90.4	68.1	32.7
MGA_1446	LOCUS_14120	sequence02:45282..45707(-)	partial			WP_002263142.1	rod shape-determining protein MreC	100.0	52.2	45.8
MGA_1448	LOCUS_14140	sequence03:169..621(+)	internal_stop_codon	619..621(+)		WP_120719025.1	IS3 family transposase	82.0	27.6	56.7
MGA_1449	LOCUS_14150	sequence03:670..888(+)	internal_stop_codon	619..621(+)		WP_120719025.1	IS3 family transposase	98.6	15.8	91.5
MGA_1465	LOCUS_14310	sequence03:17229..17543(-)	partial			WP_002983650.1	DNA-directed RNA polymerase subunit omega	69.2	68.6	93.1
MGA_1491	LOCUS_14570	sequence03:45286..45870(-)	frameshift		45863	WP_010906086.1	6-phospho-beta-glucosidase	99.0	40.5	68.4
MGA_1492	LOCUS_14580	sequence03:45834..46322(-)	frameshift		46345,45871	WP_002262239.1	6-phospho-beta-glucosidase	93.2	31.6	60.3
MGA_1493	LOCUS_14590	sequence03:46319..46705(-)	frameshift		46348	WP_010906086.1	6-phospho-beta-glucosidase	96.1	25.8	65.0
MGA_1495	LOCUS_14610	sequence03:47117..47728(+)	frameshift,internal_stop_codon	47044..47046(+)	47136	WP_002354705.1	MurR/RpiR family transcriptional regulator	89.2	63.5	28.6
MGA_1526	LOCUS_14920	sequence03:81056..82012(-)	partial			WP_012582624.1	diguanylate cyclase	60.1	42.2	33.2
MGA_1540	LOCUS_15050	sequence03:91889..92473(-)	partial			WP_000734042.1	hypothetical protein	72.7	72.7	33.3
MGA_1565	LOCUS_15300	sequence04:3009..3134(-)	frameshift		3017	WP_000764052.1	ABC transporter permease	95.1	11.4	89.7
MGA_1609	LOCUS_15730	sequence05:1759..2166(+)	partial			WP_172450158.1	IS3 family transposase	74.1	22.4	71.0
MGA_1610	LOCUS_15740	sequence05:2130..2348(+)	partial			WP_120719025.1	IS3 family transposase	98.6	15.8	90.1
MGA_1614	LOCUS_15780	sequence06:2609..3322(-)	internal_stop_codon	3377..3379(-)		WP_002262997.1	DegV family protein	100.0	82.9	71.3
MGA_1615	LOCUS_15790	sequence06:3377..3508(-)	internal_stop_codon	3377..3379(-)		WP_000143135.1	DegV family protein	69.8	10.5	70.0
MGA_1644	LOCUS_16080	sequence06:36666..36986(-)	partial			WP_011836859.1	sucrose phosphorylase	99.1	21.8	68.6
MGA_1645	LOCUS_16090	sequence06:36964..37263(-)	partial			WP_002262871.1	alpha-galactosidase	88.9	12.2	68.2
MGA_1646	LOCUS_16100	sequence06:37571..38203(+)	internal_stop_codon	37451..37453(+)		WP_002262870.1	AraC family transcriptional regulator	98.6	74.5	52.7
MGA_1652	LOCUS_16160	sequence06:44447..45184(-)	partial			WP_109290171.1	acetylxylan esterase	98.8	74.8	45.9
MGA_1653	LOCUS_16170	sequence06:45274..45543(-)	partial			WP_002288769.1	SGNH/GDSL hydrolase family protein	89.9	35.7	43.8
MGA_1656	LOCUS_16200	sequence06:47624..48499(+)	frameshift		48355	WP_013229170.1	cellulase family glycosylhydrolase	61.2	24.2	37.5
MGA_1657	LOCUS_16210	sequence06:48427..48762(+)	frameshift		48355	WP_013229170.1	cellulase family glycosylhydrolase	99.1	14.6	46.4
MGA_1658	LOCUS_16220	sequence06:48922..49440(+)	partial			WP_002287874.1	3-methyl-2-oxobutanoate hydroxymethyltransferase	88.4	55.3	65.1
MGA_1659	LOCUS_16230	sequence06:49400..49840(-)	partial			WP_109289924.1	IS3 family transposase	88.4	28.7	69.8
MGA_1662	LOCUS_16260	sequence06:51737..52777(-)	internal_stop_codon	52817..52819(-)		WP_014748651.1	PTS cellobiose transporter subunit IIC	99.1	81.1	75.5
MGA_1663	LOCUS_16270	sequence06:52817..53005(-)	internal_stop_codon	52817..52819(-)		WP_014748651.1	PTS cellobiose transporter subunit IIC	100.0	14.7	67.7
MGA_1665	LOCUS_16290	sequence06:53360..54601(+)	frameshift		53243	WP_010922527.1	glycoside hydrolase family 1 protein	95.9	82.5	64.4
MGA_1699	LOCUS_16630	sequence06:86310..86657(-)	frameshift		86321,86207	WP_002263840.1	Rgg/GadR/MutR family transcriptional regulator	96.5	39.2	50.9
MGA_1704	LOCUS_16680	sequence06:91109..91669(-)	frameshift		91207	WP_000724426.1	ABC transporter substrate-binding protein	82.3	48.1	68.2
MGA_1729	LOCUS_16930	sequence06:113277..113468(-)	partial			WP_002901715.1	competence type IV pilus minor pilin ComGE	98.4	63.9	40.3
MGA_1749	LOCUS_17090	sequence10:673..996(+)	internal_stop_codon	994..996(+)		WP_002263494.1	ISL3-like element ISSmu2 family transposase	100.0	25.7	61.7
MGA_1760	LOCUS_17120	sequence16:272..406(+)	frameshift		403	WP_000453500.1	IS110 family transposase	72.7	12.6	90.6
MGA_1761	LOCUS_17130	sequence16:493..633(+)	frameshift		403	WP_000453500.1	IS110 family transposase	100.0	18.2	76.1
