{ "type": "genome", "identifier": "GCF_000190755.2", "organism": "Methylobacter tundripaludum SV96", "title": "Methylobacter tundripaludum SV96", "description": "na", "data type": "Genome sequencing and assembly", "organization": "US DOE Joint Genome Institute (JGI-PGF)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000190755.2", "bioproject": "PRJNA224116", "biosample": "SAMN00102804", "wgs_master": "AEGW00000000.2", "refseq_category": "reference genome", "taxid": "697282", "species_taxid": "173365", "organism_name": "Methylobacter tundripaludum SV96", "infraspecific_name": "strain=SV96", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2011/08/25", "asm_name": "ASM19075v3", "asm_submitter": "US DOE Joint Genome Institute (JGI-PGF)", "gbrs_paired_asm": "GCA_000190755.3", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/190/755/GCF_000190755.2_ASM19075v3", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4848329", "genome_size_ungapped": "4846919", "gc_percent": "49.500000", "replicon_count": "0", "scaffold_count": "3", "contig_count": "17", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2022-07-13", "total_gene_count": "4373", "protein_coding_gene_count": "4265", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2011-08-25", "dateModified": "2011-08-25", "datePublished": "2011-08-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Methylobacter tundripaludum SV96" ], "sample_taxid": [ "697282" ], 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77.5216, "matched_fragments": 54, "total_fragments": 1614, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylomicrobium lacus", "strain": "strain=LW14", "accession": "GCA_000527095.1", "taxid": 136992, "species_taxid": 136992, "relation_to_type": "type", "validated": true, "ani": 77.518, "matched_fragments": 263, "total_fragments": 1614, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylotuvimicrobium alcaliphilum", "strain": "strain=20Z", "accession": "GCA_000968535.1", "taxid": 271065, "species_taxid": 271065, "relation_to_type": "type", "validated": true, "ani": 77.3073, "matched_fragments": 147, "total_fragments": 1614, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylovulum miyakonense", "strain": "strain=HT12", "accession": "GCA_000384075.1", "taxid": 645578, "species_taxid": 645578, "relation_to_type": "type", "validated": true, "ani": 77.1527, "matched_fragments": 234, "total_fragments": 1614, 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