{
    "type": "genome",
    "identifier": "GCF_000193495.2",
    "organism": "Acetobacter aceti NBRC 14818",
    "title": "Acetobacter aceti NBRC 14818",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Tokyo",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000193495.2",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00036545",
        "wgs_master": "na",
        "refseq_category": "na",
        "taxid": "887700",
        "species_taxid": "435",
        "organism_name": "Acetobacter aceti NBRC 14818",
        "infraspecific_name": "strain=NBRC 14818",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/09/02",
        "asm_name": "ASM19349v2",
        "asm_submitter": "The University of Tokyo",
        "gbrs_paired_asm": "GCA_000193495.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/495/GCF_000193495.2_ASM19349v2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3693126",
        "genome_size_ungapped": "3693126",
        "gc_percent": "57.000000",
        "replicon_count": "5",
        "scaffold_count": "5",
        "contig_count": "5",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000193495.2-RS_2024_12_16",
        "annotation_date": "2024-12-16",
        "total_gene_count": "3425",
        "protein_coding_gene_count": "3270",
        "non_coding_gene_count": "63",
        "pubmed_id": "21081762"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-09-02",
    "dateModified": "2020-09-02",
    "datePublished": "2020-09-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acetobacter aceti NBRC 14818"
        ],
        "sample_taxid": [
            "887700"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.045 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3693126",
        "Number of Sequences": "5",
        "Longest Sequences (bp)": "3596270",
        "N50 (bp)": "3596270",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "57.1",
        "Number of CDSs": "3408",
        "Average Protein Length": "312.7",
        "Coding Ratio (%)": "86.6",
        "Number of rRNAs": "9",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Acetobacter aceti",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1226,
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                "ani_threshold": 95,
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            },
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                "organism_name": "Acetobacter aceti",
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                "ani_threshold": 95,
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            },
            {
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            },
            {
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                "relation_to_type": "type",
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            },
            {
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                "accession": "GCA_011516735.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acetobacter estunensis",
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                "accession": "GCA_011516945.1",
                "taxid": 104097,
                "species_taxid": 104097,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.1447,
                "matched_fragments": 442,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gluconobacter potus",
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                "taxid": 2724927,
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                "validated": true,
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                "matched_fragments": 210,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acetobacter indonesiensis",
                "strain": "strain=NBRC 16471",
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                "species_taxid": 104101,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Acetobacter indonesiensis",
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                "ani": 78.744,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gluconobacter aidae",
                "strain": "strain=AC10",
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                "species_taxid": 2662454,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Elioraea tepida",
                "strain": "strain=MS-P2",
                "accession": "GCA_019203965.1",
                "taxid": 2843330,
                "species_taxid": 2843330,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_000193495.2",
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                "matched_fragments": 1225,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Acetobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.82",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "aceti",
        "NBRC",
        "14818"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}