{
    "type": "genome",
    "identifier": "GCF_000193635.1",
    "organism": "Weissella cibaria KACC 11862",
    "title": "Weissella cibaria KACC 11862",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Korea Research Institute of Bioscience and Biotechnology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000193635.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02470197",
        "wgs_master": "AEKT00000000.1",
        "refseq_category": "na",
        "taxid": "911104",
        "species_taxid": "137591",
        "organism_name": "Weissella cibaria KACC 11862",
        "infraspecific_name": "strain=KACC 11862",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2010/11/05",
        "asm_name": "ASM19363v1",
        "asm_submitter": "Korea Research Institute of Bioscience and Biotechnology",
        "gbrs_paired_asm": "GCA_000193635.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/193/635/GCF_000193635.1_ASM19363v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2317857",
        "genome_size_ungapped": "2317857",
        "gc_percent": "45.000000",
        "replicon_count": "0",
        "scaffold_count": "72",
        "contig_count": "72",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000193635.1-RS_2024_03_20",
        "annotation_date": "2024-03-20",
        "total_gene_count": "2211",
        "protein_coding_gene_count": "2114",
        "non_coding_gene_count": "84",
        "pubmed_id": "21097615"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2010-11-05",
    "dateModified": "2010-11-05",
    "datePublished": "2010-11-05",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Weissella cibaria KACC 11862"
        ],
        "sample_taxid": [
            "911104"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.660 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2316702",
        "Number of Sequences": "63",
        "Longest Sequences (bp)": "136004",
        "N50 (bp)": "98815",
        "Gap Ratio (%)": "0.000086",
        "GCcontent (%)": "45.1",
        "Number of CDSs": "2120",
        "Average Protein Length": "314.3",
        "Coding Ratio (%)": "86.3",
        "Number of rRNAs": "3",
        "Number of tRNAs": "70",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Weissella cibaria",
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                "accession": "GCA_000193635.2",
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
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            },
            {
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Weissella jogaejeotgali",
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                "accession": "GCA_001932615.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella hellenica",
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                "matched_fragments": 129,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella viridescens",
                "strain": "strain=DSM 20410",
                "accession": "GCA_001437355.1",
                "taxid": 1629,
                "species_taxid": 1629,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella thailandensis",
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                "ani": 78.7371,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella paramesenteroides",
                "strain": "strain=ATCC 33313",
                "accession": "GCA_000160575.1",
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                "species_taxid": 1249,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella viridescens",
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                "species_taxid": 1629,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6331,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella ceti",
                "strain": "strain=CECT 7719",
                "accession": "GCA_018394055.1",
                "taxid": 759620,
                "species_taxid": 759620,
                "relation_to_type": "suspected-type",
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                "ani": 78.6297,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella hellenica",
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                "accession": "GCA_006540065.1",
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                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella viridescens",
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                "accession": "GCA_900460455.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5101,
                "matched_fragments": 99,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella bombi",
                "strain": "strain=R-53094",
                "accession": "GCA_900094835.1",
                "taxid": 1505725,
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                "relation_to_type": "type",
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                "matched_fragments": 150,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Weissella bombi",
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                "accession": "GCA_005405505.1",
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                "ani": 78.283,
                "matched_fragments": 153,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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        "gtdb_result": [
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                "accession": "GCF_000193635.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Weissella",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "KACC",
        "11862"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}