{ "type": "genome", "identifier": "GCF_000218485.1", "organism": "Aquimarina agarivorans", "title": "Aquimarina agarivorans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Shandong University at Weihai", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000218485.1", "bioproject": "PRJNA224116", "biosample": "SAMN02470930", "wgs_master": "AFPB00000000.1", "refseq_category": "reference genome", "taxid": "980584", "species_taxid": "980584", "organism_name": "Aquimarina agarivorans", "infraspecific_name": "strain=HQM9", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2011/06/14", "asm_name": "ASM21848v2", "asm_submitter": "Shandong University at Weihai", "gbrs_paired_asm": "GCA_000218485.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/218/485/GCF_000218485.1_ASM21848v2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4073879", "genome_size_ungapped": "4073879", "gc_percent": "33.000000", "replicon_count": "0", "scaffold_count": "183", "contig_count": "183", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000218485.1-RS_2024_08_04", "annotation_date": "2024-08-04", "total_gene_count": "3558", "protein_coding_gene_count": "3413", "non_coding_gene_count": "44", "pubmed_id": "21725015" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2011-06-14", "dateModified": "2011-06-14", "datePublished": "2011-06-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Aquimarina agarivorans" ], "sample_taxid": [ "980584" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "1.144 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4073879", "Number of Sequences": "183", "Longest Sequences (bp)": "211929", "N50 (bp)": "57084", "Gap Ratio (%)": "0.000025", "GCcontent (%)": "33.2", "Number of CDSs": "3455", "Average Protein Length": "326.8", "Coding Ratio (%)": "83.1", "Number of rRNAs": "3", "Number of tRNAs": "37", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Aquimarina agarivorans", "strain": "strain=HQM9", "accession": "GCA_000218485.2", "taxid": 980584, "species_taxid": 980584, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1268, "total_fragments": 1273, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Aquimarina agarilytica", "strain": "strain=ZC1", "accession": "GCA_000255455.1", "taxid": 1087449, "species_taxid": 1087449, "relation_to_type": "type", "validated": true, "ani": 81.1904, "matched_fragments": 662, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hanstruepera marina", "strain": "strain=NBU2968", "accession": "GCA_019880635.1", "taxid": 2873265, "species_taxid": 2873265, "relation_to_type": "type", "validated": true, "ani": 77.0765, "matched_fragments": 79, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella echinorum", "strain": "strain=KCTC 22026", "accession": "GCA_014284085.1", "taxid": 538189, "species_taxid": 538189, "relation_to_type": "type", "validated": true, "ani": 76.9254, "matched_fragments": 87, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina amphilecti", "strain": "strain=DSM 25232", "accession": "GCA_900109375.1", "taxid": 1038014, "species_taxid": 1038014, "relation_to_type": "type", "validated": true, "ani": 76.8419, "matched_fragments": 94, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina muelleri", "strain": "strain=KCTC 12285", "accession": "GCA_014651355.1", "taxid": 279356, "species_taxid": 279356, "relation_to_type": "type", "validated": true, "ani": 76.7504, "matched_fragments": 110, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina muelleri", "strain": "strain=DSM 19832", "accession": "GCA_000430665.1", "taxid": 279356, "species_taxid": 279356, "relation_to_type": "type", "validated": true, "ani": 76.7429, "matched_fragments": 108, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algibacter pacificus", "strain": "strain=H164", "accession": "GCA_008033385.1", "taxid": 2599389, "species_taxid": 2599389, "relation_to_type": "type", "validated": true, "ani": 76.6855, "matched_fragments": 104, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tenacibaculum todarodis", "strain": "strain=LPB0136", "accession": "GCA_001889045.1", "taxid": 1850252, "species_taxid": 1850252, "relation_to_type": "type", "validated": true, "ani": 76.6133, "matched_fragments": 87, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dokdonia pacifica", "strain": "strain=CGMCC 1.12184", "accession": "GCA_014636685.1", "taxid": 1627892, "species_taxid": 1627892, "relation_to_type": "type", "validated": true, "ani": 76.6116, "matched_fragments": 87, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina mytili", "strain": "strain=KCTC 23302", "accession": "GCA_016735115.1", "taxid": 874423, "species_taxid": 874423, "relation_to_type": "type", "validated": true, "ani": 76.5932, "matched_fragments": 110, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella vidalii", "strain": "strain=HL634", "accession": "GCA_013403955.1", "taxid": 2615024, "species_taxid": 2615024, "relation_to_type": "type", "validated": true, "ani": 76.593, "matched_fragments": 96, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dokdonia pacifica", "strain": "strain=DSM 25597", "accession": "GCA_900188275.1", "taxid": 1627892, "species_taxid": 1627892, "relation_to_type": "type", "validated": true, "ani": 76.5869, "matched_fragments": 88, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina latercula", "strain": "strain=DSM 2041", "accession": "GCA_000430645.1", "taxid": 987, "species_taxid": 987, "relation_to_type": "type", "validated": true, "ani": 76.5838, "matched_fragments": 111, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kordia antarctica", "strain": "strain=IMCC3317", "accession": "GCA_009901525.1", "taxid": 1218801, "species_taxid": 1218801, "relation_to_type": "type", "validated": true, "ani": 76.5013, "matched_fragments": 89, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hanstruepera ponticola", "strain": "strain=MM-14", "accession": "GCA_012931685.1", "taxid": 2042995, "species_taxid": 2042995, "relation_to_type": "type", "validated": true, "ani": 76.4902, "matched_fragments": 72, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tenacibaculum discolor", "strain": "strain=DSM 18842", "accession": "GCA_003664185.1", "taxid": 361581, "species_taxid": 361581, "relation_to_type": "type", "validated": true, "ani": 76.4717, "matched_fragments": 70, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pontimicrobium aquaticum", "strain": "strain=CAU 1491", "accession": "GCA_005047595.1", "taxid": 2565367, "species_taxid": 2565367, "relation_to_type": "type", "validated": true, "ani": 76.2396, "matched_fragments": 78, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina longa", "strain": "strain=SW024", "accession": "GCA_001401755.1", "taxid": 1080221, "species_taxid": 1080221, "relation_to_type": "type", "validated": true, "ani": 76.239, "matched_fragments": 124, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavivirga rizhaonensis", "strain": "strain=RZ03", "accession": "GCA_004791695.1", "taxid": 2559571, "species_taxid": 2559571, "relation_to_type": "type", "validated": true, "ani": 76.1518, "matched_fragments": 106, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenitalea lutea", "strain": "strain=CGMCC 1.12213", "accession": "GCA_900141715.1", "taxid": 1178825, "species_taxid": 1178825, "relation_to_type": "type", "validated": true, "ani": 76.0786, "matched_fragments": 109, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariivivens marinum", "strain": "strain=MT3-5-12", "accession": "GCA_022662175.1", "taxid": 2913555, "species_taxid": 2913555, "relation_to_type": "type", "validated": true, "ani": 76.0701, "matched_fragments": 67, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium xueshanense", "strain": "strain=CGMCC 1.9227", "accession": "GCA_900112975.1", "taxid": 935223, "species_taxid": 935223, "relation_to_type": "type", "validated": true, "ani": 75.7115, "matched_fragments": 66, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polaribacter gangjinensis", "strain": "strain=JCM 16152", "accession": "GCA_020532765.1", "taxid": 574710, "species_taxid": 574710, "relation_to_type": "type", "validated": true, "ani": 75.6579, "matched_fragments": 71, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polaribacter gangjinensis", "strain": "strain=KCTC 22729", "accession": "GCA_002954645.1", "taxid": 574710, "species_taxid": 574710, "relation_to_type": "type", "validated": true, "ani": 75.642, "matched_fragments": 72, "total_fragments": 1273, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000218485.1", "gtdb_species": "s__Aquimarina agarivorans", "ani": 100.0, "matched_fragments": 1267, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_000255455.1", "gtdb_species": "s__Aquimarina agarilytica", "ani": 81.1773, "matched_fragments": 663, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003610635.1", "gtdb_species": "s__Ichthyenterobacterium magnum", "ani": 76.7728, "matched_fragments": 91, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Ichthyenterobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900299505.1", "gtdb_species": "s__Aquimarina sp900299505", "ani": 76.7718, "matched_fragments": 106, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007489275.1", "gtdb_species": "s__Aquimarina algiphila", "ani": 76.7215, "matched_fragments": 130, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.78", "min_intra_species_ani": "98.78", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900299535.1", "gtdb_species": "s__Aquimarina sp900299535", "ani": 76.6831, "matched_fragments": 112, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.11", "min_intra_species_ani": "95.11", "mean_intra_species_af": "0.81", "min_intra_species_af": "0.81", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013365535.1", "gtdb_species": "s__Aquimarina sp013365535", "ani": 76.6292, "matched_fragments": 94, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016735115.1", "gtdb_species": "s__Aquimarina mytili", "ani": 76.5932, "matched_fragments": 110, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900188275.1", "gtdb_species": "s__Dokdonia pacifica", "ani": 76.5869, "matched_fragments": 88, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Dokdonia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002893765.1", "gtdb_species": "s__Tamlana_A carrageenivorans", "ani": 76.5653, "matched_fragments": 100, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tamlana_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000430645.1", "gtdb_species": "s__Aquimarina latercula", "ani": 76.565, "matched_fragments": 112, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.44", "min_intra_species_ani": "98.41", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_009901525.1", "gtdb_species": "s__Kordia antarctica", "ani": 76.5013, "matched_fragments": 89, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Kordia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012931685.1", "gtdb_species": "s__Pseudobizionia ponticola", "ani": 76.4902, "matched_fragments": 72, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Pseudobizionia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.35", "min_intra_species_ani": "97.35", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003664185.1", "gtdb_species": "s__Tenacibaculum discolor", "ani": 76.4717, "matched_fragments": 70, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Tenacibaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.93", "min_intra_species_ani": "97.89", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_017814435.1", "gtdb_species": "s__Mariniflexile gromovii", "ani": 76.4416, "matched_fragments": 100, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Mariniflexile", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900312815.1", "gtdb_species": "s__Aquimarina sp900312815", "ani": 76.3876, "matched_fragments": 125, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000828715.1", "gtdb_species": "s__Winogradskyella sp000828715", "ani": 76.3719, "matched_fragments": 87, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Winogradskyella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001401755.1", "gtdb_species": "s__Aquimarina longa", "ani": 76.239, "matched_fragments": 124, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Aquimarina", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004791695.1", "gtdb_species": "s__Flavivirga rizhaonensis", "ani": 76.1518, "matched_fragments": 106, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavivirga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900141715.1", "gtdb_species": "s__Arenitalea lutea", "ani": 76.0786, "matched_fragments": 109, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Arenitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_905480415.1", "gtdb_species": "s__Algibacter_B sp905480415", "ani": 76.0242, "matched_fragments": 70, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Algibacter_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002954645.1", "gtdb_species": "s__Polaribacter gangjinensis", "ani": 75.642, "matched_fragments": 72, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Polaribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007097385.1", "gtdb_species": "s__Flavobacterium sp007097385", "ani": 75.6309, "matched_fragments": 71, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.503, "cell_length": 0.521, "doubling_h": null, "growth_tmp": 27.904, "optimum_tmp": 28.416, "optimum_ph": 7.25, "genome_size": 4073879.0, "gc_content": 31.955, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.857, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Aquimarina", "agarivorans" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }