{
    "type": "genome",
    "identifier": "GCF_000224715.1",
    "organism": "Serinicoccus profundi MCCC 1A05965",
    "title": "Serinicoccus profundi MCCC 1A05965",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration (SOA), PR China",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000224715.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02471205",
        "wgs_master": "AFYF00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1043205",
        "species_taxid": "1078471",
        "organism_name": "Serinicoccus profundi MCCC 1A05965",
        "infraspecific_name": "strain=MCCC 1A05965",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2011/08/30",
        "asm_name": "ASM22471v2",
        "asm_submitter": "Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration (SOA), PR China",
        "gbrs_paired_asm": "GCA_000224715.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/224/715/GCF_000224715.1_ASM22471v2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3433900",
        "genome_size_ungapped": "3433900",
        "gc_percent": "72.000000",
        "replicon_count": "0",
        "scaffold_count": "102",
        "contig_count": "102",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000224715.1-RS_2024_03_20",
        "annotation_date": "2024-03-20",
        "total_gene_count": "3254",
        "protein_coding_gene_count": "3156",
        "non_coding_gene_count": "51",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2011-08-30",
    "dateModified": "2011-08-30",
    "datePublished": "2011-08-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Serinicoccus profundi MCCC 1A05965"
        ],
        "sample_taxid": [
            "1043205"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "0.916 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3433900",
        "Number of Sequences": "102",
        "Longest Sequences (bp)": "195805",
        "N50 (bp)": "71876",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "72.0",
        "Number of CDSs": "3174",
        "Average Protein Length": "326.8",
        "Coding Ratio (%)": "90.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Serinicoccus profundi",
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                "relation_to_type": "type",
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            },
            {
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                "status": "below_threshold"
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                "species_taxid": 2306021,
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                "ani": 85.4922,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serinicoccus hydrothermalis",
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                "species_taxid": 1758689,
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                "matched_fragments": 858,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serinicoccus marinus",
                "strain": "strain=DSM 15273",
                "accession": "GCA_008386315.1",
                "taxid": 247333,
                "species_taxid": 247333,
                "relation_to_type": "type",
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                "status": "below_threshold"
            },
            {
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                "ani": 84.552,
                "matched_fragments": 835,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Serinicoccus kebangsaanensis",
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            {
                "organism_name": "Ornithinimicrobium flavum",
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                "species_taxid": 1288636,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_006519705.1",
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Ornithinimicrobium sediminis",
                "strain": "strain=EGI L100131",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Ornithinimicrobium murale",
                "strain": "strain=DSM 22056",
                "accession": "GCA_003352835.1",
                "taxid": 1050153,
                "species_taxid": 1050153,
                "relation_to_type": "type",
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                "matched_fragments": 316,
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                "ani_threshold": 95,
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            }
        ],
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                "accession": "GCF_008001015.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "MCCC",
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}