{
    "type": "genome",
    "identifier": "GCF_000231385.2",
    "organism": "Desulfosporosinus meridiei DSM 13257",
    "title": "Desulfosporosinus meridiei DSM 13257",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "JGI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000231385.2",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02261405",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "768704",
        "species_taxid": "79209",
        "organism_name": "Desulfosporosinus meridiei DSM 13257",
        "infraspecific_name": "strain=DSM 13257",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2012/08/27",
        "asm_name": "ASM23138v3",
        "asm_submitter": "JGI",
        "gbrs_paired_asm": "GCA_000231385.3",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/231/385/GCF_000231385.2_ASM23138v3",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4873567",
        "genome_size_ungapped": "4873567",
        "gc_percent": "42.000000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000231385.2-RS_2024_05_13",
        "annotation_date": "2024-05-13",
        "total_gene_count": "4576",
        "protein_coding_gene_count": "4397",
        "non_coding_gene_count": "117",
        "pubmed_id": "23105050"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2012-08-27",
    "dateModified": "2012-08-27",
    "datePublished": "2012-08-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Desulfosporosinus meridiei DSM 13257"
        ],
        "sample_taxid": [
            "768704"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia"
        ],
        "sample_host_location_id": [],
        "data_size": "1.384 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4873567",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "4873567",
        "N50 (bp)": "4873567",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.8",
        "Number of CDSs": "4539",
        "Average Protein Length": "297.6",
        "Coding Ratio (%)": "83.2",
        "Number of rRNAs": "31",
        "Number of tRNAs": "82",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Desulfosporosinus meridiei",
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                "accession": "GCA_000231385.3",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
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                "total_fragments": 1624,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Desulfosporosinus hippei",
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                "taxid": 569859,
                "species_taxid": 569859,
                "relation_to_type": "type",
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                "ani": 94.237,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfosporosinus lacus",
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            },
            {
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                "taxid": 339862,
                "species_taxid": 339862,
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                "validated": true,
                "ani": 80.3739,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfosporosinus orientis",
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                "matched_fragments": 569,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfitobacterium metallireducens",
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                "accession": "GCA_000231405.3",
                "taxid": 142877,
                "species_taxid": 142877,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 68,
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                "status": "below_threshold"
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            {
                "organism_name": "Desulfosporosinus fructosivorans",
                "strain": "strain=63.6F",
                "accession": "GCA_004766045.1",
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                "species_taxid": 2018669,
                "relation_to_type": "type",
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                "ani": 78.807,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfosporosinus acidiphilus",
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                "accession": "GCA_000255115.3",
                "taxid": 885581,
                "species_taxid": 885581,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Desulfosporosinus metallidurans",
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                "accession": "GCA_001936615.1",
                "taxid": 1888891,
                "species_taxid": 1888891,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4666,
                "matched_fragments": 281,
                "total_fragments": 1624,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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                "mean_intra_species_ani": "N/A",
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                "accession": "GCF_900100785.1",
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                "ani_circumscription_radius": 95.0,
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                "accession": "GCF_000765145.1",
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                "accession": "GCF_900129935.1",
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            {
                "accession": "GCA_016278585.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "doubling_h": null,
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        "gc_content": 41.8,
        "coding_genes": 4327.333,
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        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    "_genome_taxon": [
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        "meridiei",
        "DSM",
        "13257"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}