{ "type": "genome", "identifier": "GCF_000235645.1", "organism": "Staphylococcus simiae CCM 7213 = CCUG 51256", "title": "Staphylococcus simiae CCM 7213 = CCUG 51256", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Cornell University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000235645.1", "bioproject": "PRJNA224116", "biosample": "SAMN02428990", "wgs_master": "AEUN00000000.1", "refseq_category": "na", "taxid": "911238", "species_taxid": "308354", "organism_name": "Staphylococcus simiae CCM 7213 = CCUG 51256", "infraspecific_name": "strain=CCM 7213", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2011/11/16", "asm_name": "ASM23564v1", "asm_submitter": "Cornell University", "gbrs_paired_asm": "GCA_000235645.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/235/645/GCF_000235645.1_ASM23564v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2587121", "genome_size_ungapped": "2587121", "gc_percent": "32.000000", "replicon_count": "0", "scaffold_count": "565", "contig_count": "565", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-01-24", "total_gene_count": "2507", "protein_coding_gene_count": "2321", "non_coding_gene_count": "65", "pubmed_id": "22272658" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2011-11-16", "dateModified": "2011-11-16", "datePublished": "2011-11-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Staphylococcus simiae CCM 7213 = CCUG 51256" ], "sample_taxid": [ "911238" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "0.728 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.52, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2550904", "Number of Sequences": "251", "Longest Sequences (bp)": "85337", "N50 (bp)": "19200", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "31.9", "Number of CDSs": "2347", "Average Protein Length": "288.8", "Coding Ratio (%)": "79.7", "Number of rRNAs": "1", "Number of tRNAs": "51", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Staphylococcus simiae", "strain": "strain=CCM 7213", "accession": "GCA_000235645.2", "taxid": 308354, "species_taxid": 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