{ "type": "genome", "identifier": "GCF_000238255.3", "organism": "Pseudoalteromonas spongiae UST010723-006", "title": "Pseudoalteromonas spongiae UST010723-006", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Shandong University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000238255.3", "bioproject": "PRJNA224116", "biosample": "SAMN02470926", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1117319", "species_taxid": "298657", "organism_name": "Pseudoalteromonas spongiae UST010723-006", "infraspecific_name": "strain=UST010723-006", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/09/18", "asm_name": "ASM23825v4", "asm_submitter": "Shandong University", "gbrs_paired_asm": "GCA_000238255.4", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/238/255/GCF_000238255.3_ASM23825v4", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4752413", "genome_size_ungapped": "4752413", "gc_percent": "41.000000", "replicon_count": "2", "scaffold_count": "2", "contig_count": "2", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000238255.3-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4310", "protein_coding_gene_count": "4180", "non_coding_gene_count": "119", "pubmed_id": "22535931" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-09-18", "dateModified": "2017-09-18", "datePublished": "2017-09-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudoalteromonas spongiae UST010723-006" ], "sample_taxid": [ "1117319" ], "sample_host_organism": [ "sponge" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Hong Kong" ], "sample_host_location_id": [], "data_size": "1.343 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4752413", "Number of Sequences": "2", "Longest Sequences (bp)": "3154175", "N50 (bp)": "3154175", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "40.9", "Number of CDSs": "4218", "Average Protein Length": "333.3", "Coding Ratio (%)": "88.7", "Number of rRNAs": "22", "Number of tRNAs": "93", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Pseudoalteromonas spongiae", "strain": "strain=UST010723-006", "accession": "GCA_000238255.4", "taxid": 298657, 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