{ "type": "genome", "identifier": "GCF_000243115.2", "organism": "Niabella soli DSM 19437", "title": "Niabella soli DSM 19437", "description": "na", "data type": "Genome sequencing and assembly", "organization": "JGI", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000243115.2", "bioproject": "PRJNA224116", "biosample": "SAMN02261390", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "929713", "species_taxid": "446683", "organism_name": "Niabella soli DSM 19437", "infraspecific_name": "strain=DSM 19437", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2014/01/03", "asm_name": "ASM24311v3", "asm_submitter": "JGI", "gbrs_paired_asm": "GCA_000243115.3", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/243/115/GCF_000243115.2_ASM24311v3", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4697343", "genome_size_ungapped": "4697343", "gc_percent": "45.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000243115.2-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "3847", "protein_coding_gene_count": "3791", "non_coding_gene_count": "49", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2014-01-03", "dateModified": "2014-01-03", "datePublished": "2014-01-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Niabella soli DSM 19437" ], "sample_taxid": [ "929713" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [ "None" ], "sample_host_disease_id": [], "sample_host_location": [ "Korea" ], "sample_host_location_id": [], "data_size": "1.329 MB", "sample_ph_range": { "min": 67.0, "max": 67.0 }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4697343", "Number of Sequences": "1", "Longest Sequences (bp)": "4697343", "N50 (bp)": "4697343", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "45.2", "Number of CDSs": "3756", "Average Protein Length": "363.7", "Coding Ratio (%)": "87.2", "Number of rRNAs": "6", "Number of tRNAs": "39", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Niabella soli", "strain": "strain=JS13-8; DSM 19437", "accession": "GCA_000243115.3", "taxid": 446683, "species_taxid": 446683, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1565, "total_fragments": 1565, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Niabella 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