# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:261..4763(-)	partial			WP_041814900.1	Rib/alpha-like domain-containing protein	35.3	32.0	29.5
MGA_48	LOCUS_00480	sequence1:60227..62533(-)	partial			WP_011674061.1	YhgE/Pip domain-containing protein	62.1	49.6	22.7
MGA_65	LOCUS_00650	sequence1:81784..81984(-)	partial			WP_003564692.1	DNA-directed RNA polymerase subunit omega	87.9	70.7	56.9
MGA_74	LOCUS_00740	sequence1:92173..92757(-)	frameshift		92767	WP_010905789.1	GTP cyclohydrolase I FolE	93.8	52.1	59.3
MGA_75	LOCUS_00750	sequence1:92744..93250(-)	frameshift		92767	WP_010905789.1	GTP cyclohydrolase I FolE	86.3	41.5	53.8
MGA_115	LOCUS_01140	sequence1:133974..134585(+)	partial			WP_010905337.1	site-specific integrase	78.8	44.3	37.1
MGA_144	LOCUS_01430	sequence1:160997..161938(-)	partial			WP_002289477.1	alpha/beta hydrolase	70.9	68.3	24.0
MGA_225	LOCUS_02240	sequence1:248933..249145(+)	frameshift,internal_stop_codon	249246..249248(+)	249142	WP_005648596.1	RhuM family protein	81.4	20.7	42.1
MGA_227	LOCUS_02260	sequence1:250154..251020(+)	internal_stop_codon	250070..250072(+)		WP_010714166.1	site-specific integrase	86.5	66.3	27.7
MGA_240	LOCUS_02380	sequence1:261876..262616(-)	internal_stop_codon	262692..262694(-)		WP_011254084.1	ROK family protein	98.8	81.8	31.7
MGA_256	LOCUS_02530	sequence1:278929..279270(-)	partial			WP_009892314.1	sulfurtransferase-like selenium metabolism protein YedF	92.9	52.5	42.9
MGA_260	LOCUS_02570	sequence1:282389..283132(-)	partial			WP_000939215.1	lipoprotein YdjY	73.3	80.4	53.0
MGA_263	LOCUS_02600	sequence1:284427..285128(-)	partial			WP_003405093.1	TVP38/TMEM64 family protein	73.4	70.3	36.3
MGA_265	LOCUS_02620	sequence1:285868..286536(-)	partial			WP_011459566.1	TlpA disulfide reductase family protein	58.1	63.3	38.0
MGA_277	LOCUS_02730	sequence1:295859..296944(-)	partial			WP_011948793.1	sulfurtransferase	75.1	58.0	43.6
MGA_294	LOCUS_02900	sequence1:313586..315463(-)	partial			WP_001167510.1	type I pullulanase	98.4	72.9	43.5
MGA_302	LOCUS_02980	sequence1:321749..322702(+)	partial			WP_010939557.1	DUF697 domain-containing protein	60.6	36.6	37.0
MGA_304	LOCUS_03000	sequence1:324602..325012(-)	partial			WP_011948967.1	hypothetical protein	87.5	73.0	31.1
MGA_308	LOCUS_03040	sequence1:327060..327260(-)	internal_stop_codon	327357..327359(-)		WP_011101570.1	LysR family transcriptional regulator	95.5	20.4	46.0
MGA_309	LOCUS_03050	sequence1:327357..327950(-)	internal_stop_codon	327357..327359(-)		WP_012775137.1	LysR family transcriptional regulator	100.0	65.3	46.5
MGA_310	LOCUS_03060	sequence1:328130..328576(+)	frameshift		328534,328759	WP_032909618.1	cobalamin-independent methionine synthase II family protein	91.2	34.3	59.3
MGA_311	LOCUS_03070	sequence1:328749..329300(+)	frameshift		328534,328759	WP_032909618.1	cobalamin-independent methionine synthase II family protein	98.4	46.1	56.7
MGA_313	LOCUS_03090	sequence1:330222..330755(-)	partial			WP_003642982.1	DUF1836 domain-containing protein	59.9	66.7	29.9
MGA_316	LOCUS_03120	sequence1:333539..333985(-)	partial			WP_011222008.1	replication protein	56.1	38.4	36.5
MGA_329	LOCUS_03250	sequence1:343468..344076(-)	partial			WP_010964161.1	ribonuclease domain-containing protein	47.0	64.1	55.4
MGA_330	LOCUS_03260	sequence1:344292..345224(+)	partial			WP_011921705.1	zinc ABC transporter substrate-binding protein AdcA	57.7	35.2	55.3
MGA_342	LOCUS_03380	sequence1:356655..357194(+)	partial			WP_003131676.1	MetQ/NlpA family ABC transporter substrate-binding protein	63.7	40.6	42.2
MGA_359	LOCUS_03540	sequence1:375407..375823(-)	frameshift,internal_stop_codon	375955..375957(-)	375915	WP_002910979.1	TetR/AcrR family transcriptional regulator	85.5	68.2	40.7
MGA_361	LOCUS_03560	sequence1:378031..380055(-)	partial			WP_002285913.1	LysM peptidoglycan-binding domain-containing protein	59.9	54.8	31.4
MGA_375	LOCUS_03700	sequence1:394198..395961(-)	partial			WP_011921733.1	DUF1002 domain-containing protein	43.4	81.4	31.5
MGA_396	LOCUS_03910	sequence1:412759..413490(-)	partial			WP_000622979.1	methionine ABC transporter ATP-binding protein	89.7	65.2	51.1
MGA_446	LOCUS_04410	sequence1:461510..462886(-)	partial			WP_011012764.1	DUF2079 domain-containing protein	74.7	71.7	25.2
MGA_463	LOCUS_04580	sequence1:481892..482488(+)	frameshift		482413	WP_000765787.1	aromatic acid exporter family protein	75.3	40.9	42.0
MGA_464	LOCUS_04590	sequence1:482463..482987(+)	frameshift		482413	WP_000765787.1	aromatic acid exporter family protein	88.5	41.7	28.4
MGA_465	LOCUS_04600	sequence1:483008..484093(-)	partial			WP_011101047.1	peptidoglycan binding domain-containing protein	62.0	49.4	32.2
MGA_487	LOCUS_04820	sequence1:505975..507102(+)	partial			WP_011461034.1	glycosyltransferase	77.6	73.9	27.5
MGA_492	LOCUS_04870	sequence1:510504..510980(-)	frameshift		511006	WP_011476253.1	DEAD/DEAH box helicase	94.9	37.3	34.0
MGA_493	LOCUS_04880	sequence1:510986..511732(-)	frameshift		511003	WP_003722199.1	DEAD/DEAH box helicase	97.2	54.2	40.9
MGA_508	LOCUS_05030	sequence1:531583..532137(-)	partial			WP_002366997.1	glycoside hydrolase family 73 protein	86.4	74.2	49.1
MGA_522	LOCUS_05170	sequence1:550322..551326(-)	partial			WP_011475955.1	phage tail tape measure protein	33.2	8.8	49.1
MGA_525	LOCUS_05200	sequence1:553977..555731(-)	partial			WP_011101719.1	serine hydrolase	39.9	63.0	24.7
MGA_528	LOCUS_05220	sequence1:563358..563570(+)	frameshift		563561	WP_012027850.1	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	71.4	6.7	54.0
MGA_536	LOCUS_05300	sequence1:571842..572945(-)	partial			WP_000716331.1	substrate-binding domain-containing protein	36.5	46.8	52.2
MGA_541	LOCUS_05350	sequence1:576494..578266(-)	partial			WP_003722633.1	ATP-binding protein	71.2	71.2	39.6
MGA_565	LOCUS_05590	sequence1:604454..605173(-)	partial			WP_011172651.1	YdcF family protein	61.5	75.7	33.1
MGA_576	LOCUS_05700	sequence1:618593..620197(+)	partial			WP_002901306.1	amino acid ABC transporter permease	43.4	81.1	45.7
MGA_584	LOCUS_05780	sequence1:626368..627237(+)	partial			WP_011921881.1	lipoate--protein ligase family protein	74.0	76.7	37.7
MGA_598	LOCUS_05920	sequence1:639761..640084(-)	partial			WP_002304776.1	GIY-YIG nuclease family protein	73.8	84.0	64.6
MGA_612	LOCUS_06060	sequence1:651762..662120(-)	partial			WP_012775593.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	9.0	17.1	29.8
MGA_631	LOCUS_06240	sequence1:686609..689215(+)	partial			WP_011339403.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	47.2	49.3	37.2
MGA_652	LOCUS_06450	sequence1:712988..713746(+)	partial			WP_001832720.1	glycerophosphodiester phosphodiesterase family protein	71.4	78.2	32.3
MGA_653	LOCUS_06460	sequence1:713866..714135(-)	frameshift,internal_stop_codon	714138..714140(-)	714164	WP_001059647.1	ISL3 family transposase	82.0	16.2	63.0
MGA_654	LOCUS_06470	sequence1:714159..714551(-)	frameshift,internal_stop_codon	714137..714139(-)	714475,714163	WP_001059647.1	ISL3 family transposase	90.8	27.2	45.4
MGA_683	LOCUS_06760	sequence1:745054..745995(+)	partial			WP_002355000.1	peptidase C39 family protein	53.0	65.5	38.8
MGA_684	LOCUS_06770	sequence1:746062..746958(+)	partial			WP_000235899.1	cation diffusion facilitator family transporter	93.6	67.9	39.1
MGA_703	LOCUS_06960	sequence1:767024..768538(+)	partial			WP_000434616.1	PTS system trehalose-specific EIIBC component	97.0	72.9	65.3
MGA_746	LOCUS_07360	sequence1:825594..826919(+)	partial			WP_010922417.1	polysaccharide deacetylase family protein	41.3	42.2	39.6
MGA_748	LOCUS_07380	sequence1:827886..828692(-)	partial			WP_004255227.1	biotin--[acetyl-CoA-carboxylase] ligase	89.6	73.4	32.0
MGA_755	LOCUS_07450	sequence1:834595..834960(-)	partial			WP_011393689.1	metalloregulator ArsR/SmtB family transcription factor	63.6	65.0	42.9
MGA_780	LOCUS_07700	sequence1:860280..862307(-)	partial			WP_010906306.1	acyltransferase family protein	58.1	64.8	26.3
MGA_791	LOCUS_07810	sequence1:872481..873083(+)	partial			WP_011101142.1	ribosomal protein S18-alanine N-acetyltransferase	69.0	71.9	32.4
MGA_798	LOCUS_07880	sequence1:880007..881926(+)	partial			WP_010706701.1	autolysin	44.1	38.9	32.0
MGA_842	LOCUS_08320	sequence1:929072..929290(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	100.0	12.1	79.2
MGA_845	LOCUS_08350	sequence1:930316..931605(+)	partial			WP_004270929.1	IS30 family transposase	63.2	76.1	42.8
MGA_850	LOCUS_08400	sequence1:936585..937811(+)	partial			WP_010886457.1	mechanosensitive ion channel	97.3	72.6	30.1
MGA_938	LOCUS_09270	sequence1:1021702..1022691(+)	partial			WP_008764094.1	glutamine-hydrolyzing GMP synthase	93.6	71.7	71.5
MGA_955	LOCUS_09440	sequence1:1036783..1039035(+)	partial			WP_002285913.1	LysM peptidoglycan-binding domain-containing protein	59.9	61.8	31.5
MGA_969	LOCUS_09570	sequence1:1059243..1060487(+)	partial			WP_000516926.1	VaFE repeat-containing surface-anchored protein	25.6	10.5	33.0
MGA_976	LOCUS_09640	sequence1:1068356..1068520(+)	frameshift		1068511	WP_002668780.1	DUF4143 domain-containing protein	96.3	12.0	59.6
MGA_980	LOCUS_09680	sequence1:1070443..1070685(+)	frameshift,internal_stop_codon	1070698..1070700(+),1070331..1070333(+),1070683..1070685(+),1070774..1070776(+)	1070387,1070724	WP_001059647.1	ISL3 family transposase	100.0	18.3	53.8
MGA_982	LOCUS_09690	sequence1:1072104..1072316(+)	internal_stop_codon	1072001..1072003(+),1071893..1071895(+)		WP_012775611.1	type A chloramphenicol O-acetyltransferase	98.6	33.3	78.3
MGA_994	LOCUS_09810	sequence1:1083815..1084081(-)	partial			WP_002681169.1	flavin reductase	78.4	36.9	52.2
MGA_1000	LOCUS_09870	sequence1:1089412..1091256(+)	internal_stop_codon	1089394..1089396(+)		WP_000796600.1	heavy metal translocating P-type ATPase	100.0	77.9	65.7
MGA_1007	LOCUS_09940	sequence1:1096758..1097666(-)	frameshift		1096847	WP_002330912.1	IS256-like element ISLgar5 family transposase	90.7	69.2	48.5
MGA_1010	LOCUS_09970	sequence1:1099571..1100674(+)	partial			WP_013525225.1	serine hydrolase	68.1	33.9	26.6
MGA_1011	LOCUS_09980	sequence1:1100838..1101146(+)	partial			WP_024265752.1	putative quinol monooxygenase	96.1	72.5	38.8
MGA_1013	LOCUS_10000	sequence1:1102591..1103340(-)	partial			WP_002371451.1	hypothetical protein	80.3	65.6	48.0
MGA_1017	LOCUS_10040	sequence1:1106363..1107004(-)	partial			WP_003359491.1	ABC transporter ATP-binding protein	96.7	73.8	41.3
MGA_1038	LOCUS_10250	sequence1:1129208..1129975(+)	partial			WP_005817406.1	ABC transporter permease subunit	83.1	62.7	27.8
MGA_1043	LOCUS_10300	sequence1:1133864..1135060(+)	partial			WP_000437455.1	bifunctional metallophosphatase/5'-nucleotidase	69.6	58.6	29.6
MGA_1048	LOCUS_10350	sequence1:1137491..1137814(-)	partial			WP_011476637.1	helix-turn-helix transcriptional regulator	96.3	74.3	36.2
MGA_1049	LOCUS_10360	sequence1:1138250..1138672(+)	partial			WP_011948039.1	cupin domain-containing protein	97.9	62.6	52.6
MGA_1058	LOCUS_10450	sequence1:1150163..1150531(+)	partial			WP_002263287.1	DUF3021 family protein	59.0	56.7	36.1
MGA_1070	LOCUS_10570	sequence1:1160348..1160602(+)	partial			WP_011202293.1	virulence RhuM family protein	61.9	14.4	67.3
MGA_1071	LOCUS_10580	sequence1:1160758..1162659(+)	partial			WP_011015494.1	metallophosphoesterase family protein	70.6	70.3	26.6
MGA_1074	LOCUS_10610	sequence1:1164987..1165328(+)	partial			WP_010869053.1	hypothetical protein	79.6	41.8	53.3
MGA_1081	LOCUS_10680	sequence1:1171621..1172418(-)	frameshift		1172477	WP_141741171.1	IS3 family transposase	98.9	55.4	55.0
MGA_1101	LOCUS_10880	sequence1:1194593..1194778(+)	frameshift,internal_stop_codon	1194776..1194778(+)	1194910	WP_048065742.1	GrpB family protein	95.1	32.2	51.7
MGA_1123	LOCUS_11100	sequence1:1216297..1217232(+)	partial			WP_001231621.1	envelope stress sensor histidine kinase HitS	74.9	65.3	32.1
MGA_1133	LOCUS_11200	sequence1:1226834..1227304(-)	partial			WP_010922676.1	BglG family transcription antiterminator	95.5	21.9	48.0
MGA_1134	LOCUS_11210	sequence1:1227496..1228338(-)	partial			WP_011837485.1	CPBP family glutamic-type intramembrane protease	46.8	51.0	34.6
MGA_1140	LOCUS_11270	sequence1:1233990..1234346(+)	partial			WP_002297107.1	YlbG family protein	69.5	73.2	47.6
MGA_1151	LOCUS_11380	sequence1:1244322..1244945(+)	partial			WP_011836866.1	CDP-alcohol phosphatidyltransferase family protein	45.9	48.6	31.4
MGA_1155	LOCUS_11420	sequence1:1247920..1248552(+)	partial			WP_002287161.1	TIGR01906 family membrane protein	73.3	71.7	39.3
MGA_1165	LOCUS_11510	sequence1:1263218..1263883(-)	partial			WP_011021567.1	hypothetical protein	86.4	25.4	28.0
MGA_1173	LOCUS_11590	sequence1:1274419..1274547(+)	internal_stop_codon	1274545..1274547(+)		WP_001830662.1	FAD-dependent oxidoreductase	95.2	8.8	60.0
MGA_1174	LOCUS_11600	sequence1:1274656..1275780(+)	internal_stop_codon	1274545..1274547(+)		WP_001830662.1	FAD-dependent oxidoreductase	99.2	82.1	48.8
MGA_1176	LOCUS_11620	sequence1:1277101..1278123(+)	partial			WP_001302096.1	thiosulfate sulfurtransferase YnjE	84.7	64.8	32.4
MGA_1180	LOCUS_11660	sequence1:1283553..1287122(+)	partial			WP_003699719.1	polysaccharide biosynthesis protein	38.2	81.8	42.1
MGA_1193	LOCUS_11790	sequence1:1302517..1302879(-)	internal_stop_codon	1302910..1302912(-)		WP_003896718.1	amino acid ABC transporter substrate-binding protein/permease	99.2	25.4	72.3
MGA_1194	LOCUS_11800	sequence1:1302910..1303968(-)	internal_stop_codon	1302910..1302912(-)		WP_003896718.1	amino acid ABC transporter substrate-binding protein/permease	89.5	67.3	44.6
MGA_1195	LOCUS_11810	sequence1:1304161..1305087(-)	partial			WP_003732560.1	RDD family protein	48.1	83.1	35.1
MGA_1247	LOCUS_12320	sequence1:1364603..1365217(+)	partial			WP_002360528.1	NADPH-dependent oxidoreductase	89.7	43.8	57.9
MGA_1249	LOCUS_12340	sequence1:1366294..1366596(+)	partial			WP_002295087.1	cell division protein ZapA	76.0	52.4	47.4
MGA_1262	LOCUS_12470	sequence1:1379191..1379784(+)	partial			WP_002289575.1	DUF948 domain-containing protein	59.9	80.1	51.3
MGA_1263	LOCUS_12480	sequence1:1379771..1380217(+)	partial			WP_002289576.1	YtxH domain-containing protein	85.1	61.0	34.1
MGA_1270	LOCUS_12550	sequence1:1388587..1389048(+)	partial			WP_003732066.1	ribonuclease HI family protein	61.4	68.4	36.2
MGA_1295	LOCUS_12800	sequence1:1414205..1415449(+)	partial			WP_010989707.1	cobyric acid synthase	72.2	58.5	50.2
MGA_1298	LOCUS_12830	sequence1:1417326..1418102(+)	partial			WP_009968147.1	iron ABC transporter permease	98.8	72.8	38.9
MGA_1346	LOCUS_13310	sequence1:1473564..1476317(+)	partial			WP_002289244.1	DNA translocase FtsK	50.4	57.4	68.4
MGA_1361	LOCUS_13450	sequence1:1487693..1488244(+)	partial			WP_001002574.1	ABC transporter ATP-binding protein	89.6	74.0	35.2
MGA_1363	LOCUS_13470	sequence1:1489367..1489792(+)	internal_stop_codon	1489337..1489339(+)		WP_002680518.1	ABC transporter ATP-binding protein	92.2	23.6	38.9
MGA_1364	LOCUS_13480	sequence1:1489805..1490851(+)	partial			WP_002680783.1	ribosome small subunit-dependent GTPase A	69.0	67.6	37.5
MGA_1417	LOCUS_14010	sequence1:1550675..1551577(+)	partial			WP_003640564.1	DNA-processing protein DprA	72.3	75.0	44.2
MGA_1434	LOCUS_14180	sequence1:1574486..1577890(+)	partial			WP_012775496.1	pneumococcal-type histidine triad protein	56.2	59.7	34.9
MGA_1435	LOCUS_14190	sequence1:1578007..1579176(-)	partial			WP_011108607.1	hybrid sensor histidine kinase/response regulator transcription factor	35.0	10.5	26.2
MGA_1439	LOCUS_14230	sequence1:1583262..1583573(+)	partial			WP_012775182.1	MFS transporter	95.1	23.2	32.7
MGA_1451	LOCUS_14350	sequence1:1596814..1597257(+)	partial			WP_011101355.1	sugar ABC transporter permease	99.3	45.5	39.7
MGA_1484	LOCUS_14680	sequence1:1632168..1632884(-)	partial			WP_003646470.1	CPBP family intramembrane metalloprotease	51.3	51.0	28.0
MGA_1500	LOCUS_14840	sequence1:1650286..1650570(-)	frameshift		1650626,1650341	WP_001281642.1	ISL3 family transposase	80.9	17.5	96.1
MGA_1501	LOCUS_14850	sequence1:1650531..1651529(-)	frameshift		1650629,1650341	WP_001281642.1	ISL3 family transposase	90.4	67.8	92.3
MGA_1502	LOCUS_14860	sequence1:1651771..1652250(-)	internal_stop_codon	1652317..1652319(-)		WP_001031938.1	mercury(II) reductase	100.0	29.1	96.2
MGA_1503	LOCUS_14870	sequence1:1652317..1653411(-)	internal_stop_codon	1652317..1652319(-)		WP_001031938.1	mercury(II) reductase	100.0	66.7	94.5
MGA_1510	LOCUS_14940	sequence1:1658825..1660177(+)	partial			WP_124797038.1	putative glycoside hydrolase	74.4	69.0	33.8
MGA_1518	LOCUS_15020	sequence1:1673905..1675806(-)	partial			WP_011392674.1	fibronectin type III domain-containing protein	53.9	60.5	23.6
MGA_1519	LOCUS_15030	sequence1:1676690..1677571(-)	partial			WP_010965345.1	3D domain-containing protein	53.2	27.0	35.9
MGA_1520	LOCUS_15040	sequence1:1677690..1678559(-)	partial			WP_012256103.1	metal ABC transporter permease	93.8	73.8	42.1
MGA_1529	LOCUS_15130	sequence1:1686894..1687538(-)	partial			WP_010886847.1	DUF937 domain-containing protein	68.2	51.1	30.6
MGA_1541	LOCUS_15250	sequence1:1704914..1707406(-)	partial			WP_004398920.1	ATP-dependent DNA helicase DinG	64.2	62.9	26.2
