<?xml version="1.0" ?>
<BioSampleSet><BioSample submission_date="2011-12-05T14:53:09.320" last_update="2013-08-28T13:58:12.057" publication_date="2011-12-05T14:53:09.530" access="public" id="761813" accession="SAMN00761813">   <Ids>     <Id db="BioSample" is_primary="1">SAMN00761813</Id>     <Id db="JCVI" db_label="Sample name">HMPREF1052</Id>     <Id db="SRA">SRS281652</Id>   </Ids>   <Description>     <Title>MIGS Cultured Bacterial/Archaeal sample from Pasteurella bettyae CCUG 2042</Title>     <Organism taxonomy_id="1095749" taxonomy_name="Pasteurella bettyae CCUG 2042"/>     <Comment>       <Paragraph>Illumina Paired-Ends </Paragraph>       <Paragraph>Keywords: GSC:MIxS;MIGS:6.0</Paragraph>     </Comment>   </Description>   <Owner>     <Name abbreviation="JCVI">J. Craig Venter Institute</Name>   </Owner>   <Models>     <Model>MIGS.ba</Model>   </Models>   <Package display_name="MIGS: cultured bacteria/archaea; version 6.0">MIGS.ba.6.0</Package>   <Attributes>     <Attribute attribute_name="finishing strategy (depth of coverage)">Level 2: High-Quality Draft64.5x;73</Attribute>     <Attribute attribute_name="collection date" harmonized_name="collection_date" display_name="collection date">not determined</Attribute>     <Attribute attribute_name="estimated_size" harmonized_name="estimated_size" display_name="estimated size">2258000</Attribute>     <Attribute attribute_name="isol_growth_condt" harmonized_name="isol_growth_condt" display_name="isolation and growth condition">not determined</Attribute>     <Attribute attribute_name="specific host" harmonized_name="host" display_name="host">Homo sapiens</Attribute>     <Attribute attribute_name="project_type">Reference Genome</Attribute>     <Attribute attribute_name="lat_lon" harmonized_name="lat_lon" display_name="latitude and longitude">not determined</Attribute>     <Attribute attribute_name="biome" harmonized_name="env_broad_scale" display_name="broad-scale environmental context">terrestrial biome [ENVO:00000446]</Attribute>     <Attribute attribute_name="misc_param: HMP body site">Vaginal</Attribute>     <Attribute attribute_name="nucleic acid extraction">not determined</Attribute>     <Attribute attribute_name="investigation type" harmonized_name="investigation_type" display_name="investigation type">missing</Attribute>     <Attribute attribute_name="feature" harmonized_name="env_local_scale" display_name="local-scale environmental context">human-associated habitat [ENVO:00009003]</Attribute>     <Attribute attribute_name="host taxid" harmonized_name="host_taxid" display_name="host taxonomy ID">9606</Attribute>     <Attribute attribute_name="project_name" harmonized_name="project_name" display_name="project name">Pasteurella bettyae CCUG 2042</Attribute>     <Attribute attribute_name="assembly">Newbler v. 2.6</Attribute>     <Attribute attribute_name="geo_loc_name" harmonized_name="geo_loc_name" display_name="geographic location">not determined</Attribute>     <Attribute attribute_name="source_mat_id" harmonized_name="source_material_id" display_name="source material identifiers">CCUG 2042</Attribute>     <Attribute attribute_name="material" harmonized_name="env_medium" display_name="environmental medium">biological product [ENVO:02000043]</Attribute>     <Attribute attribute_name="ref_biomaterial" harmonized_name="ref_biomaterial" display_name="reference for biomaterial">not determined</Attribute>     <Attribute attribute_name="misc_param: HMP supersite">urogenital_tract</Attribute>     <Attribute attribute_name="num_replicons" harmonized_name="num_replicons" display_name="number of replicons">not determined</Attribute>     <Attribute attribute_name="sequencing method">Illumina HiSeq 2000</Attribute>     <Attribute attribute_name="sop">http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf</Attribute>     <Attribute attribute_name="strain" harmonized_name="strain" display_name="strain">CCUG 2042</Attribute>     <Attribute attribute_name="environmental package" harmonized_name="env_package" display_name="environmental package">missing</Attribute>   </Attributes>   <Links>     <Link type="entrez" target="bioproject">75143</Link>   </Links>   <Status status="live" when="2013-08-28T13:58:12"/> </BioSample> </BioSampleSet>
