# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence1:574..987(-)	partial			WP_010966780.1	group II intron reverse transcriptase/maturase	86.9	25.5	52.5
MGA_8	LOCUS_00070	sequence1:7141..7575(-)	frameshift		7564	WP_012048245.1	TVP38/TMEM64 family protein	98.6	58.2	43.7
MGA_9	LOCUS_00080	sequence1:7484..7822(-)	frameshift		7561	WP_010965993.1	TVP38/TMEM64 family protein	65.2	30.9	42.5
MGA_11	LOCUS_00100	sequence1:8261..8932(-)	partial			WP_011392060.1	stalk domain-containing protein	80.7	63.1	42.1
MGA_12	LOCUS_00110	sequence1:9026..9292(-)	frameshift		9426	WP_010966127.1	Tex family protein	100.0	12.3	72.7
MGA_13	LOCUS_00120	sequence1:9421..11163(-)	frameshift		9429	WP_009895217.1	Tex family protein	99.5	81.1	62.9
MGA_25	LOCUS_00240	sequence1:22898..23356(-)	frameshift,internal_stop_codon	23587..23589(-)	23519,23559	WP_010966780.1	group II intron reverse transcriptase/maturase	98.7	31.9	57.3
MGA_27	LOCUS_00250	sequence1:23587..23877(-)	frameshift,internal_stop_codon	23587..23589(-)	23519,23348,23559	WP_010966780.1	group II intron reverse transcriptase/maturase	97.9	20.2	50.5
MGA_28	LOCUS_00260	sequence1:24367..24564(-)	partial			WP_011461672.1	zinc-ribbon domain containing protein	93.8	63.4	53.1
MGA_31	LOCUS_00290	sequence1:27688..27939(-)	frameshift		27944	WP_004080180.1	flagellar export chaperone FliS	85.5	53.3	50.7
MGA_33	LOCUS_00310	sequence1:28088..29899(-)	partial			WP_011460770.1	flagellar filament capping protein FliD	62.7	81.3	35.0
MGA_53	LOCUS_00510	sequence1:49086..51449(+)	partial			WP_011460976.1	phosphodiester glycosidase family protein	65.4	57.6	36.2
MGA_56	LOCUS_00540	sequence1:52702..54141(-)	partial			WP_011393983.1	GerMN domain-containing protein	34.0	51.8	32.6
MGA_65	LOCUS_00630	sequence1:60905..61732(+)	frameshift		60930	WP_011391687.1	Rossmann-like and DUF2520 domain-containing protein	88.0	79.5	37.7
MGA_71	LOCUS_00690	sequence1:66983..67435(-)	frameshift		67461	WP_011987107.1	PRD domain-containing protein	96.7	50.9	46.2
MGA_72	LOCUS_00700	sequence1:67447..67809(-)	frameshift		67461	WP_009967114.1	ptsGHI operon transcription antiterminator GlcT	95.8	39.9	40.0
MGA_73	LOCUS_00710	sequence1:67827..68207(-)	frameshift		68208	WP_000473665.1	PTS glucose transporter subunit IIA	100.0	76.4	54.3
MGA_79	LOCUS_00770	sequence1:73716..75362(-)	partial			WP_004080235.1	methyl-accepting chemotaxis protein	59.5	59.2	26.1
MGA_90	LOCUS_00880	sequence1:86192..86566(-)	frameshift		86676	WP_005791589.1	glutamate formimidoyltransferase	99.2	41.0	62.6
MGA_91	LOCUS_00890	sequence1:86674..87087(-)	frameshift		86676	WP_011836511.1	glutamate formimidoyltransferase	100.0	45.8	58.4
MGA_94	LOCUS_00920	sequence1:90874..91473(-)	partial			WP_012584035.1	transporter substrate-binding domain-containing protein	79.4	24.4	43.8
MGA_100	LOCUS_00980	sequence1:101548..102405(-)	frameshift		102410	WP_005811665.1	M42 family metallopeptidase	98.2	82.0	57.1
MGA_114	LOCUS_01120	sequence1:110402..111091(+)	partial			WP_041272333.1	peptidoglycan-binding protein	31.0	17.7	45.1
MGA_129	LOCUS_01270	sequence1:121389..121829(-)	frameshift		121948	WP_198598615.1	IS256 family transposase	91.8	32.6	43.3
MGA_130	LOCUS_01280	sequence1:121946..122602(-)	frameshift		121963	WP_115793508.1	IS256 family transposase	78.4	77.0	69.6
MGA_137	LOCUS_01350	sequence1:126175..126840(-)	partial			WP_011727659.1	mycofactocin radical SAM maturase	95.0	51.3	29.7
MGA_139	LOCUS_01370	sequence1:128179..128772(+)	frameshift		128128,128635	WP_011073631.1	IS256-like element ISSod5 family transposase	78.2	38.2	31.2
MGA_140	LOCUS_01380	sequence1:128824..129414(-)	partial			WP_181746991.1	IS1182 family transposase	99.0	41.1	63.1
MGA_151	LOCUS_01490	sequence1:136890..137438(-)	partial			WP_011249190.1	MFS transporter	79.7	36.0	27.6
MGA_155	LOCUS_01530	sequence1:139571..140248(-)	partial			WP_011986476.1	sigma-54-dependent Fis family transcriptional regulator	89.8	33.1	26.8
MGA_160	LOCUS_01580	sequence1:144617..144871(-)	internal_stop_codon	144896..144898(-)		WP_011250792.1	IS607-like element ISTko2 family transposase	89.3	36.6	56.0
MGA_162	LOCUS_01600	sequence1:145834..146088(+)	partial			WP_012258849.1	rhomboid family intramembrane serine protease	100.0	35.8	47.6
MGA_163	LOCUS_01610	sequence1:146452..146760(-)	frameshift,internal_stop_codon	146896..146898(-),146911..146913(-)	146923	WP_010867640.1	ATP-binding cassette domain-containing protein	91.2	35.4	40.9
MGA_164	LOCUS_01620	sequence1:146867..147097(-)	frameshift,internal_stop_codon	146843..146845(-),146849..146851(-)	146908,146830	WP_010883361.1	LPS export ABC transporter ATP-binding protein	82.9	25.4	60.3
MGA_173	LOCUS_01710	sequence1:154340..154741(-)	frameshift		154878	WP_011392765.1	bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase	78.9	49.1	42.9
MGA_178	LOCUS_01760	sequence1:159458..159838(-)	partial			WP_003437730.1	precorrin-6A reductase	88.1	44.0	48.2
MGA_180	LOCUS_01780	sequence1:160340..160513(-)	frameshift		160523,160589	WP_010877020.1	cobalamin biosynthesis protein	84.2	14.6	56.2
MGA_183	LOCUS_01810	sequence1:161560..162063(-)	partial			WP_201626293.1	precorrin-2 C(20)-methyltransferase	98.8	70.0	44.0
MGA_184	LOCUS_01820	sequence1:162182..162466(-)	partial			WP_011023539.1	sirohydrochlorin nickelochelatase	92.6	66.9	37.9
MGA_188	LOCUS_01860	sequence1:164921..165250(-)	frameshift		165279	WP_011948522.1	hypothetical protein	77.1	33.7	33.3
MGA_189	LOCUS_01870	sequence1:165232..165651(-)	frameshift		165279	WP_011948522.1	hypothetical protein	91.4	49.6	43.0
MGA_192	LOCUS_01900	sequence1:167076..167597(-)	frameshift		167632	WP_011836536.1	cobyric acid synthase	98.3	32.1	43.3
MGA_193	LOCUS_01910	sequence1:167621..168598(-)	frameshift		167641	WP_011948601.1	cobyric acid synthase	98.2	64.3	61.1
MGA_195	LOCUS_01930	sequence1:169975..170688(-)	frameshift		170696	WP_005901765.1	ABC transporter ATP-binding protein	92.0	84.8	40.8
MGA_198	LOCUS_01960	sequence1:173315..173512(-)	partial			WP_010963546.1	class I SAM-dependent RNA methyltransferase	95.4	16.6	64.5
MGA_199	LOCUS_01970	sequence1:173747..173989(+)	frameshift		173977	WP_011250792.1	IS607-like element ISTko2 family transposase	96.2	38.6	44.9
MGA_203	LOCUS_02010	sequence1:176390..177190(-)	partial			WP_004080600.1	YgcG family protein	56.0	60.1	55.3
MGA_206	LOCUS_02040	sequence1:179277..179603(-)	partial			WP_011249672.1	DUF2250 domain-containing protein	74.1	45.8	39.0
MGA_216	LOCUS_02140	sequence1:189187..189495(+)	partial			WP_003721950.1	transcriptional regulator ZurR	94.1	69.5	35.7
MGA_217	LOCUS_02150	sequence1:189546..190352(+)	partial			WP_011836339.1	zinc ABC transporter substrate-binding protein AdcA	96.6	55.0	35.3
MGA_228	LOCUS_02260	sequence1:202624..203046(-)	partial			WP_011704143.1	substrate-binding domain-containing protein	67.9	28.4	46.3
MGA_238	LOCUS_02360	sequence1:215480..215662(-)	frameshift		215679	WP_010963480.1	PTS mannitol transporter subunit IICB	96.7	12.1	60.3
MGA_239	LOCUS_02370	sequence1:215674..216915(-)	frameshift		215679	WP_010963480.1	PTS mannitol transporter subunit IICB	96.9	83.4	63.3
MGA_248	LOCUS_02460	sequence1:225204..226238(-)	frameshift		226240,225223	WP_012048290.1	sigma-54-dependent transcriptional regulator	96.2	37.1	42.0
MGA_249	LOCUS_02470	sequence1:226205..227443(-)	frameshift		226249	WP_010963704.1	sigma-54-dependent transcriptional regulator	96.8	43.4	48.9
MGA_257	LOCUS_02550	sequence1:235162..235557(-)	frameshift		235640	WP_000012390.1	iron export ABC transporter permease subunit FetB	97.7	49.8	56.2
MGA_258	LOCUS_02560	sequence1:235629..235916(-)	frameshift		235640	WP_000012390.1	iron export ABC transporter permease subunit FetB	91.6	33.9	51.7
MGA_263	LOCUS_02610	sequence1:239322..239765(-)	partial			WP_011460229.1	2-hydroxyacyl-CoA dehydratase	98.6	38.5	36.6
MGA_264	LOCUS_02620	sequence1:239795..240418(-)	frameshift		239806	WP_011392664.1	2-hydroxyacyl-CoA dehydratase	94.7	53.8	38.2
MGA_265	LOCUS_02630	sequence1:240419..240682(-)	frameshift		240705	WP_011392665.1	acyl-CoA dehydratase activase-related protein	82.8	22.9	45.3
MGA_266	LOCUS_02640	sequence1:240673..241401(-)	frameshift		240708	WP_011392665.1	acyl-CoA dehydratase activase-related protein	97.1	72.9	33.2
MGA_270	LOCUS_02680	sequence1:242884..243171(-)	partial			WP_011948232.1	metalloregulator ArsR/SmtB family transcription factor	90.5	71.1	43.0
MGA_273	LOCUS_02710	sequence1:246861..248414(-)	frameshift		248406	WP_011393212.1	PBP1A family penicillin-binding protein	84.5	48.0	44.7
MGA_274	LOCUS_02720	sequence1:248380..249336(-)	frameshift		248406	WP_011393212.1	PBP1A family penicillin-binding protein	83.0	28.5	44.4
MGA_276	LOCUS_02740	sequence1:250871..251230(-)	partial			WP_011986653.1	BglG family transcription antiterminator	72.3	12.3	46.5
MGA_284	LOCUS_02820	sequence1:258119..258361(+)	frameshift,internal_stop_codon	258485..258487(+)	258340	WP_067624265.1	IS256-like element IS16 family transposase	63.8	12.9	41.2
MGA_285	LOCUS_02830	sequence1:259143..259685(-)	frameshift,internal_stop_codon	259142..259144(-)	259702	WP_012048325.1	fructose-6-phosphate aldolase	96.7	77.8	64.6
MGA_286	LOCUS_02840	sequence1:259682..259810(-)	frameshift		259702	WP_012048325.1	fructose-6-phosphate aldolase	97.6	18.2	61.0
MGA_290	LOCUS_02880	sequence1:262195..262578(-)	partial			WP_011102260.1	transcriptional regulator GutM	92.1	69.6	39.5
MGA_293	LOCUS_02910	sequence1:264875..265105(+)	frameshift		265048,265366	WP_181746991.1	IS1182 family transposase	75.0	12.0	54.4
MGA_294	LOCUS_02920	sequence1:265102..265371(+)	frameshift		265048,265366	WP_181746991.1	IS1182 family transposase	98.9	18.6	67.0
MGA_298	LOCUS_02960	sequence1:267609..268166(-)	frameshift		268240	WP_003430702.1	transketolase family protein	98.4	59.5	67.0
MGA_299	LOCUS_02970	sequence1:268238..268540(-)	frameshift		268243	WP_011462197.1	transketolase family protein	97.0	31.2	79.4
MGA_308	LOCUS_03060	sequence1:277970..278275(-)	frameshift		278283	WP_011948422.1	lipoate--protein ligase	96.0	29.8	55.7
MGA_309	LOCUS_03070	sequence1:278281..278949(-)	frameshift		278289	WP_011861285.1	lipoate--protein ligase	100.0	67.4	66.7
MGA_312	LOCUS_03100	sequence1:280801..282144(+)	partial			WP_011861287.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	99.1	54.0	61.3
MGA_313	LOCUS_03110	sequence1:282141..282635(+)	frameshift		282629	WP_011861288.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	100.0	33.8	67.7
MGA_314	LOCUS_03120	sequence1:282638..283594(+)	frameshift		282632	WP_011861288.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	100.0	65.6	69.5
MGA_320	LOCUS_03180	sequence1:290390..291898(-)	partial			WP_011393604.1	cobalamin-dependent protein	49.6	41.7	37.1
MGA_325	LOCUS_03230	sequence1:297281..297589(-)	partial			WP_004080550.1	nucleotidyltransferase domain-containing protein	74.5	78.6	32.1
MGA_336	LOCUS_03340	sequence1:306487..306843(-)	frameshift		306875	WP_012257046.1	maltose alpha-D-glucosyltransferase	89.0	9.4	33.6
MGA_337	LOCUS_03350	sequence1:306858..308063(-)	frameshift		306866	WP_011267720.1	maltose alpha-D-glucosyltransferase	77.1	27.7	26.9
MGA_344	LOCUS_03420	sequence1:313178..314548(-)	frameshift		314672,314624	WP_011948228.1	AAA family ATPase	99.1	38.4	42.6
MGA_345	LOCUS_03430	sequence1:314670..315674(-)	frameshift		315648,314624,314672	WP_011861080.1	AAA family ATPase	99.4	28.9	23.1
MGA_346	LOCUS_03440	sequence1:315640..316710(-)	frameshift		315648,315663	WP_011948228.1	AAA family ATPase	98.9	29.8	46.9
MGA_349	LOCUS_03470	sequence1:321589..323670(-)	frameshift		323921	WP_011861078.1	helicase-exonuclease AddAB subunit AddB	98.7	60.0	52.4
MGA_350	LOCUS_03480	sequence1:323901..325049(-)	frameshift		323927	WP_011948191.1	helicase-exonuclease AddAB subunit AddB	99.0	32.9	52.1
MGA_352	LOCUS_03500	sequence1:326408..327136(+)	frameshift		327106	WP_010878290.1	DUF1646 family protein	94.2	67.3	31.8
MGA_353	LOCUS_03510	sequence1:327124..327456(+)	frameshift		327106	WP_010878290.1	DUF1646 family protein	98.2	30.2	57.4
MGA_355	LOCUS_03530	sequence1:328362..328667(-)	frameshift		328391	WP_010943560.1	bacteriohemerythrin	90.1	69.5	38.5
MGA_359	LOCUS_03570	sequence1:331062..332873(-)	partial			WP_010963641.1	efflux RND transporter periplasmic adaptor subunit	55.4	84.9	29.2
MGA_360	LOCUS_03580	sequence1:332964..334058(-)	frameshift		334156,334150	WP_012583129.1	MATE family efflux transporter	85.7	67.0	36.2
MGA_362	LOCUS_03600	sequence1:334335..335126(-)	frameshift		335131	WP_011987090.1	DNA polymerase IV	83.7	63.0	52.7
MGA_363	LOCUS_03610	sequence1:335123..335503(-)	frameshift		335134	WP_011987090.1	DNA polymerase IV	100.0	36.1	65.1
MGA_368	LOCUS_03660	sequence1:340091..340783(+)	frameshift		340780	WP_011393363.1	cobalt transporter CbiM	92.6	61.6	62.2
MGA_387	LOCUS_03850	sequence1:359988..360164(-)	internal_stop_codon	360327..360329(-),360348..360350(-)		WP_011674094.1	PLP-dependent transferase	94.8	15.1	60.0
MGA_396	LOCUS_03940	sequence1:369262..369930(-)	frameshift		369980	WP_012257719.1	amidohydrolase	95.9	49.2	32.1
MGA_397	LOCUS_03950	sequence1:369945..370556(-)	frameshift		369980	WP_012583295.1	amidohydrolase	91.1	43.2	37.6
MGA_403	LOCUS_04010	sequence1:376172..376519(-)	frameshift		376599	WP_012583514.1	ABC transporter ATP-binding protein	97.4	21.4	58.9
MGA_404	LOCUS_04020	sequence1:376588..377724(-)	frameshift		376596,376590	WP_010865052.1	ABC transporter ATP-binding protein	100.0	74.2	50.8
MGA_412	LOCUS_04100	sequence1:386005..386295(-)	frameshift,internal_stop_codon	386415..386417(-)	386408	WP_011393517.1	xylose ABC transporter ATP-binding protein	95.8	18.3	59.8
MGA_413	LOCUS_04110	sequence1:386415..387539(-)	frameshift,internal_stop_codon	386415..386417(-)	386408,386420	WP_011393517.1	xylose ABC transporter ATP-binding protein	98.4	73.0	58.4
MGA_419	LOCUS_04170	sequence1:393573..394484(-)	frameshift		394495	WP_012048134.1	TrkH family potassium uptake protein	100.0	67.6	50.0
MGA_420	LOCUS_04180	sequence1:394481..394825(-)	frameshift		394495	WP_012048134.1	TrkH family potassium uptake protein	93.9	23.9	56.1
MGA_430	LOCUS_04280	sequence1:403996..404298(-)	frameshift		404009,404348	WP_003359496.1	MFS transporter	98.0	26.8	39.4
MGA_435	LOCUS_04330	sequence1:406957..407235(-)	frameshift		407308	WP_003431138.1	ribulose-phosphate 3-epimerase	95.7	39.5	53.4
MGA_436	LOCUS_04340	sequence1:407156..407608(-)	frameshift		407308	WP_003431138.1	ribulose-phosphate 3-epimerase	68.0	46.6	70.2
MGA_440	LOCUS_04380	sequence1:409968..410579(-)	frameshift		409994	WP_003430704.1	transketolase	95.1	71.5	72.5
MGA_447	LOCUS_04450	sequence1:417583..418497(-)	internal_stop_codon	418498..418500(-),418513..418515(-)		WP_010966133.1	glycine betaine ABC transporter substrate-binding protein	99.7	56.6	55.4
MGA_448	LOCUS_04460	sequence1:418513..419151(-)	internal_stop_codon	418498..418500(-),418513..418515(-)		WP_003437129.1	glycine betaine ABC transporter substrate-binding protein	99.1	40.8	51.4
MGA_455	LOCUS_04530	sequence1:424824..426233(-)	frameshift		426241	WP_004537186.1	carbohydrate-binding module family 20 domain-containing protein	97.0	59.2	41.1
MGA_456	LOCUS_04540	sequence1:426230..426937(-)	frameshift		426247	WP_010974204.1	glucan 1,4-alpha-glucosidase	82.6	24.2	35.6
MGA_468	LOCUS_04660	sequence1:439772..440299(-)	frameshift		440315	WP_011392664.1	2-hydroxyacyl-CoA dehydratase	85.7	40.3	48.7
MGA_469	LOCUS_04670	sequence1:440226..440849(-)	frameshift,internal_stop_codon	440478..440480(-)	440528,440314,440459	WP_011392884.1	acyl-CoA dehydratase activase-related protein	86.0	49.2	43.3
MGA_472	LOCUS_04700	sequence1:443143..444063(-)	partial			WP_001194993.1	maltosaccharide ABC transporter permease MalC	98.7	70.7	39.4
MGA_474	LOCUS_04720	sequence1:445411..446991(-)	partial			WP_010922388.1	alpha-amylase AmyA	97.0	70.2	39.2
MGA_475	LOCUS_04730	sequence1:447177..448151(-)	partial			WP_010963834.1	YvcK family protein	96.9	69.8	60.0
MGA_478	LOCUS_04760	sequence1:449759..450406(-)	frameshift		450480	WP_012048307.1	UDP-N-acetylmuramate dehydrogenase	99.1	69.6	56.8
MGA_479	LOCUS_04770	sequence1:450472..450663(-)	frameshift		450477	WP_009894000.1	UDP-N-acetylmuramate dehydrogenase	95.2	19.7	43.3
MGA_481	LOCUS_04790	sequence1:451389..452252(-)	partial			WP_000662583.1	patatin-like phospholipase family protein	62.0	66.9	41.3
MGA_485	LOCUS_04830	sequence1:455099..455569(-)	frameshift		455586	WP_011021742.1	NosD domain-containing protein	95.5	16.4	24.8
MGA_492	LOCUS_04900	sequence1:459583..459906(-)	partial			WP_012584035.1	transporter substrate-binding domain-containing protein	93.5	15.4	56.0
MGA_494	LOCUS_04920	sequence1:462256..462438(-)	frameshift,internal_stop_codon	462265..462267(-)	462279	WP_001005309.1	heavy metal translocating P-type ATPase	96.7	7.2	56.9
MGA_499	LOCUS_04970	sequence1:466679..466834(+)	frameshift		466822	WP_010966691.1	FMN-dependent NADH-azoreductase	100.0	25.5	62.7
MGA_500	LOCUS_04980	sequence1:466831..467283(+)	frameshift		466822	WP_010966691.1	FMN-dependent NADH-azoreductase	92.7	69.5	64.0
MGA_504	LOCUS_05020	sequence1:469474..469830(-)	partial			WP_011393157.1	DUF134 domain-containing protein	81.4	64.4	72.9
MGA_505	LOCUS_05030	sequence1:469898..471193(-)	frameshift		471294	WP_011392212.1	PAS domain S-box protein	96.8	50.2	39.3
MGA_506	LOCUS_05040	sequence1:471271..472701(-)	partial			WP_162890714.1	PAS domain S-box protein	43.7	17.7	37.2
MGA_507	LOCUS_05050	sequence1:473090..473503(-)	frameshift		473104	WP_011392958.1	anaerobic ribonucleoside-triphosphate reductase activating protein	91.2	54.3	49.2
MGA_511	LOCUS_05090	sequence1:477498..477914(-)	frameshift		477480,477465	WP_012582659.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	97.1	43.7	63.2
MGA_515	LOCUS_05130	sequence1:481251..482123(-)	frameshift		482304,482199	WP_012582603.1	FAD-dependent oxidoreductase	98.3	63.6	52.3
MGA_516	LOCUS_05140	sequence1:482290..482592(-)	frameshift		482214,482334	WP_011392943.1	FAD-dependent oxidoreductase	86.0	19.2	62.8
MGA_517	LOCUS_05150	sequence1:482752..483225(+)	partial			WP_010964939.1	[FeFe] hydrogenase H-cluster radical SAM maturase HydE	88.5	39.4	51.8
MGA_524	LOCUS_05220	sequence1:487030..487389(-)	partial			WP_011392926.1	DUF5320 domain-containing protein	44.5	37.7	58.5
MGA_526	LOCUS_05240	sequence1:488689..489300(-)	frameshift		488700	WP_012870015.1	dynamin family protein	83.7	41.5	34.1
MGA_556	LOCUS_05520	sequence1:514606..514860(+)	frameshift		514613	WP_011393300.1	DUF4258 domain-containing protein	92.9	77.7	52.5
MGA_567	LOCUS_05630	sequence1:526416..526766(-)	frameshift		526430,526710	WP_011391959.1	ROK family transcriptional regulator	81.0	23.4	43.8
MGA_570	LOCUS_05660	sequence1:528944..529282(-)	frameshift		529311	WP_011016044.1	UDP-glucose--hexose-1-phosphate uridylyltransferase	90.2	20.0	45.2
MGA_571	LOCUS_05670	sequence1:529288..530520(-)	frameshift		529311	WP_010966244.1	UDP-glucose--hexose-1-phosphate uridylyltransferase	97.8	79.3	56.9
MGA_585	LOCUS_05810	sequence1:545798..546763(-)	frameshift		546792,546057,546023	WP_010963681.1	glycoside hydrolase family 88 protein	96.9	84.2	45.5
MGA_610	LOCUS_06060	sequence1:571263..571508(-)	frameshift		571313	WP_011392040.1	long-chain fatty acid--CoA ligase	61.7	10.2	50.0
MGA_619	LOCUS_06150	sequence1:580212..580613(-)	frameshift		580621	WP_012583250.1	excinuclease ABC subunit UvrA	99.2	13.9	78.8
MGA_624	LOCUS_06200	sequence1:586402..587055(-)	frameshift		586407	WP_010963822.1	S1C family serine protease	90.8	49.8	30.0
MGA_629	LOCUS_06250	sequence1:591082..592134(-)	partial			WP_010966511.1	PucR family transcriptional regulator	57.4	62.8	27.5
MGA_636	LOCUS_06320	sequence1:598082..599011(-)	frameshift		599046	WP_035214035.1	cell division FtsA domain-containing protein	99.0	44.5	29.9
MGA_637	LOCUS_06330	sequence1:599005..599835(-)	frameshift		599046	WP_010964331.1	cell division protein FtsA	97.8	39.7	51.1
MGA_640	LOCUS_06360	sequence1:602817..604148(+)	frameshift		604142	WP_003439135.1	AAA family ATPase	83.1	78.8	66.0
MGA_651	LOCUS_06470	sequence1:615083..615475(-)	partial			WP_005480518.1	phosphoenolpyruvate--protein phosphotransferase	99.2	16.4	42.7
MGA_654	LOCUS_06500	sequence1:617286..618713(-)	partial			WP_010966369.1	sigma 54-interacting transcriptional regulator	92.2	67.3	48.1
MGA_658	LOCUS_06540	sequence1:622230..623423(-)	frameshift		623554	WP_011987067.1	glycerol kinase GlpK	99.7	79.5	76.5
MGA_659	LOCUS_06550	sequence1:623534..623722(-)	frameshift		623554	WP_012896469.1	glycerol kinase GlpK	93.5	11.7	67.2
MGA_664	LOCUS_06600	sequence1:627377..627898(-)	partial			WP_012259413.1	CRISPR-associated protein Cas4	64.7	65.9	33.0
MGA_666	LOCUS_06620	sequence1:628282..629076(-)	frameshift		629062	WP_000270702.1	KdpD-like non-kinase potassium sensor	98.1	67.5	47.9
MGA_667	LOCUS_06630	sequence1:629054..629407(-)	frameshift		629062	WP_011181481.1	KdpD-like non-kinase potassium sensor	97.4	29.7	62.3
MGA_672	LOCUS_06680	sequence1:634290..636140(-)	frameshift		636163	WP_010966263.1	sugar phosphate nucleotidyltransferase	99.2	79.5	32.9
MGA_673	LOCUS_06690	sequence1:636161..636619(-)	frameshift		636163	WP_010966263.1	sugar phosphate nucleotidyltransferase	100.0	18.9	52.6
MGA_675	LOCUS_06710	sequence1:636935..637282(+)	frameshift,internal_stop_codon	637211..637213(+)	637192,636908,637220	WP_012582481.1	Na/Pi cotransporter family protein	80.0	16.8	40.2
MGA_677	LOCUS_06730	sequence1:637726..638358(+)	frameshift		638340	WP_010890707.1	spore germination protein	92.9	54.0	33.5
MGA_679	LOCUS_06750	sequence1:639114..640523(-)	partial			WP_011391991.1	PIG-L family deacetylase	62.7	43.6	36.1
MGA_700	LOCUS_06960	sequence1:665146..665760(-)	frameshift		665169	WP_012048273.1	glucoamylase family protein	92.2	6.6	35.1
MGA_709	LOCUS_07050	sequence1:675381..676520(+)	partial			WP_013529647.1	sensor histidine kinase KdpD	97.6	40.5	49.5
MGA_714	LOCUS_07100	sequence1:680822..681505(-)	frameshift		681551	WP_003430704.1	transketolase	98.7	83.0	72.8
MGA_733	LOCUS_07290	sequence1:696634..697299(+)	partial			WP_003438605.1	peroxiredoxin	92.8	29.1	67.0
MGA_734	LOCUS_07300	sequence1:697324..698577(-)	partial			WP_011948973.1	M14 family metallopeptidase	35.7	34.5	43.6
MGA_756	LOCUS_07520	sequence1:719747..720406(+)	partial			WP_005812118.1	BON domain-containing protein	96.3	71.2	34.9
MGA_758	LOCUS_07540	sequence1:720918..722468(-)	partial			WP_000631786.1	transglutaminaseTgpA domain-containing protein	89.3	62.1	27.5
MGA_760	LOCUS_07560	sequence1:723080..724120(-)	partial			WP_012259028.1	DUF58 domain-containing protein	48.8	39.6	26.5
MGA_764	LOCUS_07600	sequence1:726694..727677(+)	partial			WP_071521818.1	SafA/ExsA family spore coat assembly protein	58.1	63.1	41.0
MGA_769	LOCUS_07650	sequence1:729595..731115(-)	partial			WP_012546288.1	FAD-dependent thymidylate synthase	36.4	79.8	26.9
MGA_772	LOCUS_07680	sequence1:733325..733795(+)	partial			WP_010965754.1	2-oxoacid:acceptor oxidoreductase subunit alpha	89.1	24.2	47.5
MGA_788	LOCUS_07830	sequence1:745924..746103(-)	frameshift		745959	WP_010966390.1	RNA-binding protein	86.4	55.4	58.8
MGA_826	LOCUS_08210	sequence1:773534..773785(-)	partial			WP_011393939.1	elongation factor Tu	100.0	20.8	84.3
MGA_828	LOCUS_08220	sequence1:774572..774997(-)	frameshift,internal_stop_codon	774465..774467(-)	774592,774585,774404,774385	WP_001029614.1	elongation factor Tu	97.2	34.7	87.6
MGA_834	LOCUS_08280	sequence1:779053..779469(-)	frameshift		779491	WP_069591551.1	serine O-acetyltransferase	97.8	57.6	64.2
MGA_835	LOCUS_08290	sequence1:779432..779719(-)	frameshift		779491	WP_069591551.1	serine O-acetyltransferase	83.2	33.2	69.6
MGA_840	LOCUS_08340	sequence1:784158..785402(-)	partial			WP_012257328.1	permease	71.5	53.3	33.0
MGA_855	LOCUS_08490	sequence1:797824..798828(-)	frameshift		798863	WP_011392656.1	elongation factor G	95.8	47.2	64.5
MGA_856	LOCUS_08500	sequence1:798861..799862(-)	frameshift		798866	WP_012583197.1	elongation factor G	99.1	49.6	50.0
MGA_858	LOCUS_08520	sequence1:801883..802194(-)	partial			WP_071540970.1	fructose-specific PTS transporter subunit EIIC	99.0	21.9	58.8
MGA_859	LOCUS_08530	sequence1:802259..803305(-)	partial			WP_012870407.1	PTS fructose transporter subunit IIBC	93.7	72.4	55.1
MGA_862	LOCUS_08560	sequence1:805963..807627(-)	partial			WP_012584100.1	diguanylate cyclase	58.8	28.8	33.0
MGA_871	LOCUS_08650	sequence1:816513..816716(-)	frameshift		816772	WP_011068791.1	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	97.0	14.5	41.2
MGA_872	LOCUS_08660	sequence1:816770..817012(-)	frameshift		816772	WP_002262835.1	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	100.0	50.3	51.2
MGA_873	LOCUS_08670	sequence1:817009..817821(-)	partial			WP_011391658.1	dihydropteroate synthase	98.5	66.2	59.0
MGA_882	LOCUS_08760	sequence1:824085..824732(-)	frameshift		824117	WP_003243672.1	Ger(x)C family spore germination protein	83.7	45.6	32.2
MGA_894	LOCUS_08880	sequence1:834884..835249(-)	partial			WP_011391658.1	dihydropteroate synthase	97.5	28.9	40.7
MGA_896	LOCUS_08900	sequence1:836963..838348(-)	partial			WP_000994077.1	PAS domain-containing sensor histidine kinase	71.6	55.0	29.8
MGA_902	LOCUS_08960	sequence1:845757..846284(-)	partial			WP_011389282.1	metalloregulator ArsR/SmtB family transcription factor	76.6	40.1	31.6
MGA_906	LOCUS_09000	sequence1:849010..849330(+)	partial			WP_011392474.1	anti-sigma factor	47.2	13.1	42.0
MGA_910	LOCUS_09040	sequence1:851665..851826(+)	partial			WP_011948831.1	DUF3787 domain-containing protein	81.1	70.5	62.8
MGA_911	LOCUS_09050	sequence1:851853..854480(-)	frameshift		854488	WP_011948832.1	pyruvate:ferredoxin (flavodoxin) oxidoreductase	100.0	74.7	73.7
MGA_912	LOCUS_09060	sequence1:854471..855364(-)	frameshift		854494	WP_011948832.1	pyruvate:ferredoxin (flavodoxin) oxidoreductase	98.3	24.9	77.7
MGA_918	LOCUS_09120	sequence1:862038..862694(-)	partial			WP_012048120.1	N-acetylmuramoyl-L-alanine amidase	80.3	18.6	43.7
MGA_920	LOCUS_09140	sequence1:863018..863236(-)	partial			WP_011948255.1	alpha/beta hydrolase	93.1	21.3	53.7
MGA_931	LOCUS_09250	sequence1:876636..877910(+)	partial			WP_010946038.1	EAL domain-containing protein	98.8	58.0	34.8
MGA_936	LOCUS_09300	sequence1:879841..880146(-)	frameshift,internal_stop_codon	880171..880173(-)	879852	WP_011393567.1	Rpn family recombination-promoting nuclease/putative transposase	99.0	32.3	48.0
MGA_942	LOCUS_09360	sequence1:884266..884418(+)	frameshift		884186,884078	WP_002003749.1	Lrp/AsnC family transcriptional regulator	100.0	29.8	62.0
MGA_943	LOCUS_09370	sequence1:884415..884675(+)	frameshift		884657	WP_011459619.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	94.2	20.9	56.8
MGA_944	LOCUS_09380	sequence1:884699..885583(+)	frameshift		884657	WP_011459619.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	99.3	75.5	54.5
MGA_945	LOCUS_09390	sequence1:885947..890626(-)	partial			WP_011108626.1	glycoside hydrolase family 66 protein	24.2	60.6	28.3
MGA_946	LOCUS_09400	sequence1:891177..892658(-)	partial			WP_011074684.1	dextranase DexA	94.1	61.8	25.5
MGA_948	LOCUS_09420	sequence1:892866..893957(-)	partial			WP_010978811.1	glycoside hydrolase family 15 protein	96.1	57.2	26.6
MGA_950	LOCUS_09440	sequence1:895847..896341(-)	partial			WP_013525205.1	carbohydrate ABC transporter permease	99.4	57.4	39.9
MGA_961	LOCUS_09550	sequence1:905643..906899(-)	partial			WP_011392768.1	ComEC/Rec2 family competence protein	62.2	74.7	52.3
MGA_968	LOCUS_09620	sequence1:913692..914009(-)	partial			WP_011393171.1	M48 family metallopeptidase	86.7	66.4	70.3
MGA_972	LOCUS_09660	sequence1:919999..921402(+)	partial			WP_011392438.1	ISLre2-like element ISMoth2 family transposase	74.7	80.7	22.3
MGA_973	LOCUS_09670	sequence1:921676..921891(-)	frameshift		921989	WP_005837038.1	IS256 family transposase	95.8	16.8	52.9
MGA_974	LOCUS_09680	sequence1:921960..922778(-)	frameshift		921995	WP_011140337.1	IS256 family transposase	96.0	64.4	46.0
MGA_981	LOCUS_09750	sequence1:927284..932329(-)	partial			WP_010890844.1	Ig domain-containing protein	29.0	50.9	30.7
MGA_983	LOCUS_09770	sequence1:933500..934093(-)	partial			WP_008769912.1	ImmA/IrrE family metallo-endopeptidase	85.3	68.2	39.1
MGA_986	LOCUS_09800	sequence1:934669..935247(-)	partial			WP_011461870.1	DUF4065 domain-containing protein	79.2	45.9	45.1
MGA_989	LOCUS_09830	sequence1:936328..937299(-)	partial			WP_011393082.1	copper amine oxidase N-terminal domain-containing protein	31.0	56.2	40.0
MGA_995	LOCUS_09890	sequence1:940621..941547(-)	partial			WP_012869241.1	peptidoglycan DD-metalloendopeptidase family protein	41.2	30.9	52.8
MGA_1001	LOCUS_09950	sequence1:945436..947268(-)	partial			WP_011391908.1	type IV secretory system conjugative DNA transfer family protein	77.4	70.3	32.2
MGA_1003	LOCUS_09970	sequence1:947857..948450(-)	frameshift		947877	WP_011461899.1	MobP3 family relaxase	99.0	19.3	30.0
MGA_1006	LOCUS_10000	sequence1:949752..950849(-)	partial			WP_011102968.1	three-Cys-motif partner protein TcmP	71.5	71.4	21.8
MGA_1013	LOCUS_10070	sequence1:953889..954575(-)	partial			WP_011948117.1	diguanylate cyclase	78.5	31.2	40.8
MGA_1031	LOCUS_10250	sequence1:966252..966680(+)	partial			WP_010708068.1	ImmA/IrrE family metallo-endopeptidase	74.6	62.6	33.6
MGA_1034	LOCUS_10280	sequence1:968727..969506(-)	frameshift		968765	WP_009894028.1	Ppx/GppA phosphatase family protein	95.8	83.0	40.0
MGA_1044	LOCUS_10380	sequence1:975804..976145(-)	frameshift,internal_stop_codon	976275..976277(-),976403..976405(-)	976339,976317	WP_010966780.1	group II intron reverse transcriptase/maturase	98.2	23.6	63.1
MGA_1046	LOCUS_10390	sequence1:976855..977292(-)	partial			WP_010966780.1	group II intron reverse transcriptase/maturase	98.6	30.6	56.2
MGA_1049	LOCUS_10420	sequence1:979740..981050(+)	partial			WP_005894725.1	tetratricopeptide repeat protein	72.9	42.1	26.5
MGA_1051	LOCUS_10440	sequence1:982326..983060(-)	frameshift		983131	WP_010964958.1	[FeFe] hydrogenase H-cluster maturation GTPase HydF	98.8	58.9	64.9
MGA_1052	LOCUS_10450	sequence1:983117..983548(-)	frameshift		983140	WP_010964958.1	[FeFe] hydrogenase H-cluster maturation GTPase HydF	92.3	32.1	62.9
MGA_1057	LOCUS_10500	sequence1:987630..988715(-)	partial			WP_011860835.1	carbon-nitrogen hydrolase family protein	32.4	45.5	30.4
MGA_1061	LOCUS_10540	sequence1:991710..991979(-)	frameshift		992056	WP_011459352.1	heavy metal translocating P-type ATPase	95.5	10.8	71.8
MGA_1064	LOCUS_10570	sequence1:992649..993236(+)	frameshift		993224	WP_012584019.1	ATP-binding protein	94.9	58.2	50.3
MGA_1065	LOCUS_10580	sequence1:993269..993550(+)	frameshift		993227	WP_004082849.1	tRNA-5-methyluridine(54) 2-sulfurtransferase	91.4	27.3	50.6
MGA_1070	LOCUS_10630	sequence1:995672..996175(+)	frameshift		996288	WP_011393430.1	DUF438 domain-containing protein	100.0	41.8	59.4
MGA_1071	LOCUS_10640	sequence1:996312..996446(+)	frameshift		996288	WP_011393430.1	DUF438 domain-containing protein	97.7	10.6	65.1
MGA_1072	LOCUS_10650	sequence1:996504..996920(-)	partial			WP_002378870.1	FMN-binding protein	87.0	38.5	39.2
MGA_1080	LOCUS_10730	sequence1:1003656..1003796(-)	frameshift		1003872	WP_002657375.1	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	100.0	18.5	63.0
MGA_1081	LOCUS_10740	sequence1:1003819..1004400(-)	frameshift		1003878	WP_000594152.1	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	91.2	71.8	72.2
MGA_1086	LOCUS_10790	sequence1:1006703..1007485(-)	frameshift		1007604	WP_012256247.1	DNA mismatch repair protein MutS	98.5	50.1	63.7
MGA_1087	LOCUS_10800	sequence1:1007596..1008204(-)	frameshift		1007604	WP_012256247.1	DNA mismatch repair protein MutS	99.5	40.0	44.3
MGA_1090	LOCUS_10830	sequence1:1011753..1011902(+)	partial			WP_002681217.1	PIN domain nuclease	87.8	32.3	65.1
MGA_1093	LOCUS_10860	sequence1:1013610..1014062(+)	partial			WP_011947918.1	DUF4179 domain-containing protein	94.0	30.0	27.7
MGA_1097	LOCUS_10900	sequence1:1014760..1015356(-)	partial			WP_012047974.1	ABC-2 transporter permease	81.3	72.2	24.2
MGA_1112	LOCUS_11050	sequence1:1033053..1033913(-)	partial			WP_012583948.1	DNA polymerase/3'-5' exonuclease PolX	98.6	49.1	45.1
MGA_1116	LOCUS_11090	sequence1:1035973..1036305(-)	partial			WP_010869915.1	zinc ribbon domain-containing protein	44.5	28.9	34.5
MGA_1129	LOCUS_11220	sequence1:1047690..1047824(-)	frameshift		1047870	WP_005814583.1	ABC transporter ATP-binding protein	100.0	7.5	79.5
MGA_1149	LOCUS_11420	sequence1:1070005..1070808(-)	partial			WP_010941622.1	transposase	53.2	44.5	37.9
MGA_1155	LOCUS_11480	sequence1:1077066..1077968(-)	frameshift		1078021	WP_011462258.1	arginine--tRNA ligase	99.7	53.3	61.7
MGA_1156	LOCUS_11490	sequence1:1078004..1078753(-)	frameshift		1078021	WP_011462258.1	arginine--tRNA ligase	96.4	42.8	53.3
MGA_1160	LOCUS_11530	sequence1:1080683..1081510(-)	frameshift		1081575	WP_011391745.1	germination protein YpeB	94.9	58.0	40.8
MGA_1170	LOCUS_11630	sequence1:1089087..1089584(-)	frameshift		1089550	WP_011947969.1	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	93.3	55.4	43.2
MGA_1171	LOCUS_11640	sequence1:1089539..1089928(-)	frameshift		1089556	WP_000772104.1	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	97.7	44.3	51.6
MGA_1177	LOCUS_11700	sequence1:1094651..1096744(-)	frameshift		1096694	WP_010966492.1	transcription-repair coupling factor	99.1	59.2	59.0
MGA_1178	LOCUS_11710	sequence1:1096692..1098161(-)	frameshift		1096694	WP_012048383.1	transcription-repair coupling factor	98.2	40.7	36.0
MGA_1181	LOCUS_11740	sequence1:1099250..1100623(-)	partial			WP_012048385.1	trypsin-like peptidase domain-containing protein	69.1	74.1	49.4
MGA_1191	LOCUS_11840	sequence1:1110526..1110963(+)	partial			WP_011090684.1	Hsp20/alpha crystallin family protein	94.5	74.3	42.3
MGA_1197	LOCUS_11900	sequence1:1115040..1117508(-)	partial			WP_000907441.1	inverse autotransporter adhesin EaeX/Air	66.8	16.6	22.6
MGA_1199	LOCUS_11920	sequence1:1118688..1119308(-)	frameshift		1118732	WP_012256992.1	DUF4127 family protein	76.2	30.8	32.3
MGA_1200	LOCUS_11930	sequence1:1119566..1120999(+)	partial			WP_012582695.1	polysaccharide deacetylase family protein	53.9	81.2	32.4
MGA_1201	LOCUS_11940	sequence1:1121022..1122992(-)	partial			WP_021362447.1	C40 family peptidase	32.8	50.0	27.5
MGA_1206	LOCUS_11990	sequence1:1129060..1134486(-)	partial			WP_013399490.1	S8 family serine peptidase	43.5	38.8	34.2
MGA_1220	LOCUS_12130	sequence1:1148102..1148404(+)	internal_stop_codon	1148402..1148404(+)		WP_000453500.1	IS110 family transposase	100.0	41.9	40.6
MGA_1221	LOCUS_12140	sequence1:1148447..1149322(+)	internal_stop_codon	1148402..1148404(+)		WP_012775668.1	IS110 family transposase	91.4	67.3	38.2
MGA_1228	LOCUS_12200	sequence1:1159876..1161147(+)	partial			WP_180371576.1	copper amine oxidase N-terminal domain-containing protein	21.5	43.5	38.5
MGA_1230	LOCUS_12220	sequence1:1161585..1162493(-)	frameshift		1162579	WP_004255189.1	cysteine desulfurase	98.7	73.3	60.1
MGA_1231	LOCUS_12230	sequence1:1162571..1162813(-)	frameshift		1162579	WP_001020769.1	cysteine desulfurase SufS	93.8	18.5	53.3
MGA_1250	LOCUS_12420	sequence1:1177350..1177694(-)	frameshift		1177702	WP_000886210.1	cell wall metabolism sensor histidine kinase VicK	99.1	25.2	55.8
MGA_1251	LOCUS_12430	sequence1:1177658..1179073(-)	frameshift		1177728,1177732	WP_009968432.1	cell wall metabolism sensor histidine kinase WalK	93.4	77.4	34.7
MGA_1252	LOCUS_12440	sequence1:1179039..1179317(-)	frameshift		1179331	WP_000971865.1	cell wall metabolism DNA-binding response regulator WalR	95.7	37.4	62.5
MGA_1253	LOCUS_12450	sequence1:1179326..1179733(-)	frameshift		1179334	WP_002357947.1	response regulator YycF	91.9	53.0	66.9
MGA_1261	LOCUS_12530	sequence1:1187551..1188390(-)	partial			WP_010880429.1	RNA-guided endonuclease TnpB family protein	99.6	61.6	37.3
MGA_1262	LOCUS_12540	sequence1:1188466..1189422(-)	partial			WP_011392768.1	ComEC/Rec2 family competence protein	79.2	72.4	54.8
MGA_1269	LOCUS_12610	sequence1:1196445..1197692(-)	partial			WP_010964227.1	methyl-accepting chemotaxis protein	88.0	54.7	25.8
MGA_1271	LOCUS_12630	sequence1:1198051..1198536(-)	partial			WP_010964635.1	YitT family protein	100.0	58.2	56.9
MGA_1275	LOCUS_12670	sequence1:1203262..1204605(-)	frameshift		1204631	WP_000077571.1	oligoendopeptidase F	100.0	73.8	59.1
MGA_1276	LOCUS_12680	sequence1:1204581..1205072(-)	frameshift		1204640	WP_011674265.1	oligoendopeptidase F	85.3	23.1	28.1
MGA_1281	LOCUS_12730	sequence1:1209784..1210488(-)	partial			WP_012914013.1	ABC transporter ATP-binding protein	91.0	35.7	46.0
MGA_1284	LOCUS_12760	sequence1:1212394..1213140(-)	partial			WP_101886531.1	ABC transporter ATP-binding protein	92.7	38.0	45.9
MGA_1286	LOCUS_12780	sequence1:1213731..1214060(-)	partial			WP_004083354.1	ABC transporter ATP-binding protein	89.9	17.4	53.1
MGA_1304	LOCUS_12960	sequence1:1231075..1231683(-)	frameshift		1231802	WP_011947968.1	cyanophycin synthetase	98.5	22.7	47.2
MGA_1305	LOCUS_12970	sequence1:1231782..1233704(-)	frameshift		1231802	WP_011947968.1	cyanophycin synthetase	99.1	72.5	52.6
MGA_1309	LOCUS_13010	sequence1:1236021..1236749(-)	frameshift		1236754	WP_003434244.1	aminotransferase class V-fold PLP-dependent enzyme	98.8	62.9	54.8
MGA_1310	LOCUS_13020	sequence1:1236746..1237162(-)	frameshift		1236754	WP_003434244.1	aminotransferase class V-fold PLP-dependent enzyme	100.0	36.6	54.7
MGA_1320	LOCUS_13120	sequence1:1246548..1246808(-)	partial			WP_003359393.1	ribonuclease P protein component	94.2	73.9	43.9
MGA_1351	LOCUS_13430	sequence1:1280595..1281551(+)	frameshift		1281542	WP_011947903.1	UPF0182 family protein	94.7	33.3	31.6
MGA_1352	LOCUS_13440	sequence1:1281617..1283323(+)	frameshift		1281542	WP_011947903.1	UPF0182 family protein	98.9	62.6	50.2
MGA_1358	LOCUS_13500	sequence1:1286370..1287110(+)	partial			WP_004080100.1	Na(+)/H(+) antiporter subunit B	72.0	70.9	38.9
MGA_1366	LOCUS_13580	sequence1:1293957..1294445(+)	partial			WP_004080080.1	FAD-dependent oxidoreductase	71.0	18.2	48.7
MGA_1369	LOCUS_13610	sequence1:1294906..1295523(+)	frameshift		1294900	WP_010878290.1	DUF1646 family protein	92.7	52.5	57.1
MGA_1387	LOCUS_13790	sequence1:1315384..1315578(-)	frameshift		1315592	WP_011860778.1	pseudouridine synthase	76.6	20.4	67.3
MGA_1388	LOCUS_13800	sequence1:1315554..1316108(-)	frameshift		1315592	WP_011860778.1	pseudouridine synthase	92.4	70.8	59.4
MGA_1390	LOCUS_13820	sequence1:1317521..1318090(+)	frameshift		1318084	WP_003732367.1	ABC transporter substrate-binding protein	92.6	38.5	54.9
MGA_1391	LOCUS_13830	sequence1:1318174..1318845(+)	frameshift		1318084	WP_003732367.1	ABC transporter substrate-binding protein	99.6	50.8	53.8
MGA_1397	LOCUS_13890	sequence1:1324478..1325524(+)	partial			WP_010880431.1	mannose-1-phosphate guanyltransferase	97.1	41.2	35.6
MGA_1401	LOCUS_13930	sequence1:1328050..1328829(+)	partial			WP_003814571.1	D-alanine--D-alanine ligase	91.5	71.8	29.8
MGA_1427	LOCUS_14180	sequence1:1358759..1359199(+)	partial			WP_005816309.1	YaaR family protein	69.9	71.0	33.0
MGA_1451	LOCUS_14420	sequence1:1380873..1381430(-)	frameshift		1380875	WP_003244727.1	anti-sigma-I factor RsgI	90.8	43.8	27.9
MGA_1465	LOCUS_14560	sequence1:1392448..1393212(+)	frameshift		1393179	WP_012582504.1	carbamoyltransferase HypF	92.1	31.4	54.3
MGA_1466	LOCUS_14570	sequence1:1393212..1394702(+)	frameshift		1393185	WP_010964128.1	carbamoyltransferase HypF	99.6	65.9	44.0
MGA_1470	LOCUS_14610	sequence1:1397264..1397614(+)	partial			WP_011389368.1	nitrogen regulation protein NR(I)	91.4	23.5	32.7
MGA_1477	LOCUS_14680	sequence1:1403170..1403442(+)	frameshift		1403439	WP_010966168.1	peptide chain release factor 1	100.0	25.3	53.8
MGA_1478	LOCUS_14690	sequence1:1403499..1404239(+)	frameshift		1403439	WP_010966168.1	peptide chain release factor 1	95.9	65.7	70.8
MGA_1488	LOCUS_14790	sequence1:1411984..1412151(+)	frameshift		1411930	WP_003432450.1	YwmB family TATA-box binding protein	100.0	22.9	44.6
MGA_1493	LOCUS_14840	sequence1:1417843..1419342(+)	frameshift		1417696	WP_012869546.1	PEP/pyruvate-binding domain-containing protein	95.6	82.7	44.4
MGA_1503	LOCUS_14940	sequence1:1434379..1434714(+)	partial			WP_002682322.1	rod-binding protein	94.6	51.0	33.0
MGA_1509	LOCUS_15000	sequence1:1439218..1439451(+)	partial			WP_015943756.1	type II toxin-antitoxin system prevent-host-death family antitoxin	89.6	26.7	45.7
MGA_1511	LOCUS_15020	sequence1:1440098..1441639(+)	frameshift		1441621	WP_021373571.1	sigma 54-interacting transcriptional regulator	99.4	51.3	46.6
MGA_1512	LOCUS_15030	sequence1:1441738..1443090(+)	partial			WP_021373571.1	sigma 54-interacting transcriptional regulator	90.0	42.4	36.0
MGA_1519	LOCUS_15100	sequence1:1448524..1449165(+)	frameshift		1449150	WP_003430702.1	transketolase family protein	93.9	65.0	70.0
MGA_1523	LOCUS_15130	sequence1:1450709..1451587(-)	partial			WP_129881459.1	oxygen-insensitive NADPH nitroreductase	62.0	72.5	22.0
MGA_1527	LOCUS_15170	sequence1:1455217..1455774(-)	frameshift		1455878	WP_011460034.1	peptidase T	100.0	45.1	63.2
MGA_1528	LOCUS_15180	sequence1:1455852..1456442(-)	frameshift		1455884	WP_011948200.1	peptidase T	95.4	45.8	67.4
MGA_1533	LOCUS_15230	sequence1:1461757..1462878(+)	frameshift		1462755	WP_011949155.1	homocysteine S-methyltransferase family protein	89.0	41.7	50.7
MGA_1534	LOCUS_15240	sequence1:1462772..1464181(+)	frameshift		1462767	WP_011949155.1	homocysteine S-methyltransferase family protein	96.6	56.8	52.3
MGA_1543	LOCUS_15330	sequence1:1467874..1468305(+)	frameshift,internal_stop_codon	1467878..1467880(+),1467863..1467865(+)	1467889,1468570,1468255	WP_021134739.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	97.2	29.5	43.6
MGA_1544	LOCUS_15340	sequence1:1468302..1468616(+)	frameshift		1468569,1468254	WP_021134739.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	88.5	20.4	51.1
MGA_1545	LOCUS_15350	sequence1:1468613..1469074(+)	frameshift		1468568	WP_021134739.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	100.0	33.9	62.7
MGA_1548	LOCUS_15380	sequence1:1469820..1470821(+)	partial			WP_000782001.1	hypothetical protein	95.5	73.5	23.2
MGA_1549	LOCUS_15390	sequence1:1470866..1471225(+)	partial			WP_011458925.1	hypothetical protein	88.2	31.2	41.9
MGA_1550	LOCUS_15400	sequence1:1471222..1471458(-)	partial			WP_011458925.1	hypothetical protein	100.0	23.2	48.7
MGA_1554	LOCUS_15440	sequence1:1474100..1474939(+)	frameshift		1473980	WP_012582734.1	glycosyltransferase family A protein	95.3	72.5	35.7
MGA_1561	LOCUS_15510	sequence1:1479561..1480025(-)	partial			WP_011459074.1	NUDIX domain-containing protein	70.8	53.8	40.4
MGA_1565	LOCUS_15550	sequence1:1484025..1484972(+)	frameshift		1484921	WP_000410209.1	methyl-accepting chemotaxis protein	94.9	70.7	26.1
MGA_1566	LOCUS_15560	sequence1:1484945..1485664(+)	frameshift		1484921	WP_012545572.1	methyl-accepting chemotaxis protein	94.1	56.7	22.7
MGA_1571	LOCUS_15610	sequence1:1488590..1489426(+)	partial			WP_010943070.1	ATP-binding protein	98.2	33.3	37.0
MGA_1572	LOCUS_15620	sequence1:1489624..1490169(+)	partial			WP_010943070.1	ATP-binding protein	82.9	18.3	70.7
MGA_1573	LOCUS_15630	sequence1:1490169..1490510(+)	frameshift		1490501	WP_003245522.1	tRNA epoxyqueuosine(34) reductase QueG	92.9	28.0	43.6
MGA_1574	LOCUS_15640	sequence1:1490554..1491294(+)	frameshift,internal_stop_codon	1491292..1491294(+)	1490501	WP_003245522.1	tRNA epoxyqueuosine(34) reductase QueG	99.6	63.2	41.9
MGA_1596	LOCUS_15860	sequence1:1513242..1514327(+)	partial			WP_010964864.1	glycoside hydrolase family 18 protein	83.9	66.8	30.2
MGA_1600	LOCUS_15900	sequence1:1517153..1517665(+)	frameshift		1517048,1517663	WP_011393775.1	M20 family metallopeptidase	97.1	41.8	56.4
MGA_1601	LOCUS_15910	sequence1:1517653..1518090(+)	frameshift		1517662	WP_011393775.1	M20 family metallopeptidase	93.1	34.2	42.2
MGA_1603	LOCUS_15930	sequence1:1519260..1519724(+)	partial			WP_004081407.1	GAF domain-containing protein	96.1	46.9	48.0
MGA_1611	LOCUS_16010	sequence1:1524834..1525463(+)	frameshift		1525430	WP_012255942.1	response regulator	95.2	63.6	39.2
MGA_1612	LOCUS_16020	sequence1:1525468..1525767(+)	frameshift		1525427	WP_012258504.1	response regulator	83.8	26.4	41.0
MGA_1613	LOCUS_16030	sequence1:1525826..1526365(+)	frameshift		1526359	WP_003439005.1	hypothetical protein	97.8	69.6	38.6
MGA_1616	LOCUS_16060	sequence1:1526953..1527492(+)	frameshift		1526869	WP_011393262.1	putative sporulation protein YtxC	89.9	55.6	37.9
MGA_1624	LOCUS_16140	sequence1:1534263..1534916(+)	frameshift		1534191	WP_010965655.1	RNA methyltransferase	97.7	84.7	39.6
MGA_1625	LOCUS_16150	sequence1:1535219..1535464(+)	frameshift		1535446	WP_010965654.1	phenylalanine--tRNA ligase subunit alpha	97.5	23.3	58.2
MGA_1626	LOCUS_16160	sequence1:1535506..1536237(+)	frameshift		1535440	WP_011393252.1	phenylalanine--tRNA ligase subunit alpha	100.0	71.8	66.5
MGA_1630	LOCUS_16200	sequence1:1541476..1543257(+)	frameshift,internal_stop_codon	1543255..1543257(+)	1543281	WP_003229541.1	endonuclease MutS2	99.0	75.3	46.2
MGA_1631	LOCUS_16210	sequence1:1543428..1543850(+)	frameshift		1543254	WP_011860930.1	endonuclease MutS2	97.9	17.3	48.2
MGA_1637	LOCUS_16270	sequence1:1548590..1549270(-)	partial			WP_005808436.1	CAP domain-containing protein	55.3	46.4	54.3
MGA_1648	LOCUS_16380	sequence1:1559633..1560076(+)	frameshift		1560058	WP_011949164.1	dihydrolipoamide acetyltransferase family protein	95.2	39.0	41.8
MGA_1649	LOCUS_16390	sequence1:1560097..1560780(+)	frameshift		1560061	WP_011949164.1	dihydrolipoamide acetyltransferase family protein	97.8	50.5	49.5
MGA_1651	LOCUS_16410	sequence1:1561458..1562168(+)	partial			WP_005814351.1	DUF4183 domain-containing protein	86.9	17.3	30.6
MGA_1652	LOCUS_16420	sequence1:1562616..1562906(+)	frameshift		1563146,1562900	WP_010966780.1	group II intron reverse transcriptase/maturase	97.9	20.2	50.5
MGA_1653	LOCUS_16430	sequence1:1562945..1563148(+)	frameshift		1563306,1563146,1562900	WP_010966780.1	group II intron reverse transcriptase/maturase	100.0	14.3	67.2
MGA_1654	LOCUS_16440	sequence1:1563171..1563398(+)	frameshift		1563145,1563305	WP_010976122.1	group II intron reverse transcriptase/maturase	84.0	15.8	55.6
MGA_1655	LOCUS_16450	sequence1:1563370..1564029(+)	frameshift		1563145,1563308	WP_010966780.1	group II intron reverse transcriptase/maturase	99.1	46.2	64.5
MGA_1662	LOCUS_16520	sequence1:1568171..1568701(-)	frameshift		1568176,1568753,1568195,1568759	WP_003434478.1	ABC-F family ATP-binding cassette domain-containing protein	98.9	28.9	53.8
MGA_1663	LOCUS_16530	sequence1:1568688..1569056(-)	frameshift		1568764,1569061,1569046	WP_011178617.1	ABC-F family ATP-binding cassette domain-containing protein	62.3	11.7	35.1
MGA_1664	LOCUS_16540	sequence1:1569041..1569817(-)	frameshift		1568968,1569073	WP_003434478.1	ABC-F family ATP-binding cassette domain-containing protein	96.5	39.7	50.2
MGA_1672	LOCUS_16620	sequence1:1576250..1576447(+)	frameshift		1576441	WP_010965995.1	3-hydroxybutyryl-CoA dehydrogenase	80.0	18.4	57.7
MGA_1673	LOCUS_16630	sequence1:1576522..1577094(+)	frameshift		1576435	WP_003390868.1	3-hydroxybutyryl-CoA dehydrogenase	100.0	68.8	78.4
MGA_1676	LOCUS_16660	sequence1:1579154..1579438(+)	frameshift,internal_stop_codon	1579133..1579135(+)	1579119	WP_005816675.1	IS200/IS605-like element ISDha13 family transposase	100.0	61.6	91.5
MGA_1677	LOCUS_16670	sequence1:1579655..1580464(+)	frameshift		1580686,1580374	WP_004398669.1	sigma-54-dependent Fis family transcriptional regulator	88.5	35.0	28.8
MGA_1678	LOCUS_16680	sequence1:1580461..1580712(+)	frameshift		1580691	WP_011393389.1	sigma-54-dependent Fis family transcriptional regulator	97.6	10.8	60.5
MGA_1679	LOCUS_16690	sequence1:1580678..1581382(+)	frameshift		1580691	WP_003434571.1	sigma 54-interacting transcriptional regulator	95.7	42.0	49.6
MGA_1682	LOCUS_16720	sequence1:1583330..1583944(+)	frameshift		1583914	WP_004454645.1	acetyl-CoA hydrolase/transferase C-terminal domain-containing protein	96.1	44.8	53.1
MGA_1683	LOCUS_16730	sequence1:1583941..1584627(+)	frameshift		1583920	WP_005901990.1	acetyl-CoA hydrolase/transferase family protein	98.7	51.8	70.7
MGA_1687	LOCUS_16770	sequence1:1586735..1587043(+)	partial			WP_005901885.1	GntP family permease	62.7	14.3	62.5
MGA_1691	LOCUS_16810	sequence1:1589216..1589503(+)	frameshift,internal_stop_codon	1589603..1589605(+)	1589470	WP_011067939.1	3-hydroxyacyl-CoA dehydrogenase family protein	88.4	26.3	58.3
MGA_1694	LOCUS_16840	sequence1:1591029..1591892(+)	partial			WP_011860738.1	GHKL domain-containing protein	81.2	74.6	31.4
MGA_1703	LOCUS_16930	sequence1:1598477..1599715(-)	partial			WP_009967303.1	serine protease AprX	75.5	72.2	47.2
MGA_1708	LOCUS_16970	sequence1:1602063..1602392(+)	partial			WP_012546883.1	IS200/IS605 family accessory protein TnpB-related protein	97.2	19.8	66.0
MGA_1709	LOCUS_16980	sequence1:1602340..1602882(+)	frameshift		1603076,1602933,1602966,1603051,1602861	WP_012546883.1	IS200/IS605 family accessory protein TnpB-related protein	91.7	30.8	60.0
MGA_1714	LOCUS_17020	sequence1:1607646..1608647(+)	partial			WP_010966780.1	group II intron reverse transcriptase/maturase	82.3	58.3	65.3
MGA_1719	LOCUS_17070	sequence1:1614382..1614594(+)	frameshift		1614570	WP_005817239.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	95.7	28.2	70.1
MGA_1720	LOCUS_17080	sequence1:1614591..1615088(+)	frameshift		1614564	WP_003420966.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	98.2	70.3	63.8
MGA_1723	LOCUS_17110	sequence1:1616018..1616587(+)	frameshift		1616575	WP_002369272.1	phosphoribosylformylglycinamidine synthase subunit PurL	98.9	25.3	72.2
MGA_1724	LOCUS_17120	sequence1:1616611..1618218(+)	frameshift		1616584	WP_196768344.1	phosphoribosylformylglycinamidine synthase subunit PurL	99.8	73.7	56.2
MGA_1725	LOCUS_17130	sequence1:1618197..1619408(+)	frameshift		1619396	WP_012047942.1	amidophosphoribosyltransferase	99.3	83.4	58.7
MGA_1726	LOCUS_17140	sequence1:1619420..1619593(+)	frameshift		1619396	WP_048060868.1	amidophosphoribosyltransferase	89.5	11.3	49.1
MGA_1729	LOCUS_17170	sequence1:1620797..1621231(+)	frameshift		1620731	WP_010964703.1	phosphoribosylglycinamide formyltransferase	94.4	66.2	64.0
MGA_1730	LOCUS_17180	sequence1:1621267..1621854(+)	frameshift		1621848	WP_000745444.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	99.5	38.0	63.4
MGA_1731	LOCUS_17190	sequence1:1621869..1622303(+)	frameshift		1621848,1622286	WP_000745439.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	99.3	28.2	62.5
MGA_1732	LOCUS_17200	sequence1:1622309..1622791(+)	frameshift		1622288	WP_000745444.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	92.5	29.0	64.2
MGA_1734	LOCUS_17220	sequence1:1624146..1624745(+)	partial			WP_010902927.1	class I SAM-dependent methyltransferase	70.9	69.5	27.5
MGA_1737	LOCUS_17250	sequence1:1627203..1627457(+)	frameshift		1627415	WP_002287405.1	polysaccharide biosynthesis protein	95.2	15.1	35.0
MGA_1738	LOCUS_17260	sequence1:1627442..1628758(+)	frameshift		1627421	WP_005812078.1	stage V sporulation protein B	85.2	71.9	30.8
MGA_1754	LOCUS_17410	sequence1:1644224..1645036(+)	frameshift		1644209	WP_010966780.1	group II intron reverse transcriptase/maturase	99.3	57.0	65.3
MGA_1758	LOCUS_17450	sequence1:1650480..1651013(+)	internal_stop_codon	1651011..1651013(+)		WP_012048146.1	ABC transporter permease	100.0	58.0	49.7
MGA_1759	LOCUS_17460	sequence1:1651020..1651397(+)	internal_stop_codon	1651011..1651013(+)		WP_012048146.1	ABC transporter permease	100.0	41.0	70.4
MGA_1765	LOCUS_17520	sequence1:1654556..1656325(+)	partial			WP_011392054.1	N-acetylmuramoyl-L-alanine amidase	49.7	45.2	36.8
MGA_1768	LOCUS_17550	sequence1:1657592..1658101(+)	frameshift		1657574	WP_010886588.1	XTP/dITP diphosphatase	95.9	82.3	50.3
MGA_1771	LOCUS_17580	sequence1:1663673..1665985(+)	partial			WP_015943970.1	EAL domain-containing protein	77.7	60.9	40.7
MGA_1776	LOCUS_17630	sequence1:1672033..1672878(+)	frameshift		1672857	WP_011392807.1	glutamine amidotransferase family protein	98.2	75.0	57.2
MGA_1777	LOCUS_17640	sequence1:1672920..1673156(+)	frameshift		1672875	WP_012582452.1	glutamine amidotransferase family protein	79.5	17.0	58.1
MGA_1783	LOCUS_17700	sequence1:1678917..1680065(+)	partial			WP_010877215.1	GAF domain-containing protein	37.7	33.6	36.7
MGA_1784	LOCUS_17710	sequence1:1680070..1681239(+)	partial			WP_012256431.1	PAS domain-containing protein	62.5	32.5	58.8
MGA_1786	LOCUS_17730	sequence1:1681692..1682120(+)	frameshift		1682117	WP_011250882.1	ATPase domain-containing protein	100.0	31.5	31.5
MGA_1787	LOCUS_17740	sequence1:1682150..1683094(+)	partial			WP_010876718.1	circadian clock protein KaiC	97.1	64.5	32.7
MGA_1794	LOCUS_17810	sequence1:1689379..1689864(+)	partial			WP_012256687.1	energy coupling factor transporter S component ThiW	90.7	20.5	45.6
MGA_1796	LOCUS_17830	sequence1:1691112..1691303(+)	partial			WP_011948212.1	hydroxyethylthiazole kinase	92.1	20.9	63.8
MGA_1811	LOCUS_17980	sequence1:1706021..1706242(+)	partial			WP_003356112.1	ATP synthase F0 subunit C	69.9	64.6	64.7
MGA_1819	LOCUS_18060	sequence1:1712487..1713488(-)	frameshift		1713526	WP_011392090.1	NAD+ synthase	98.2	62.4	58.6
MGA_1820	LOCUS_18070	sequence1:1713515..1714117(-)	frameshift		1713526	WP_011392090.1	NAD+ synthase	98.5	34.5	43.2
MGA_1827	LOCUS_18140	sequence1:1720069..1720362(+)	partial			WP_011948373.1	ATP-binding protein	97.9	16.7	65.3
MGA_1828	LOCUS_18150	sequence1:1720526..1721560(+)	partial			WP_011948373.1	ATP-binding protein	100.0	61.3	42.3
MGA_1830	LOCUS_18170	sequence1:1723306..1724466(+)	internal_stop_codon	1724464..1724466(+),1724563..1724565(+)		WP_011948373.1	ATP-binding protein	98.2	67.0	46.9
MGA_1832	LOCUS_18180	sequence1:1725530..1726894(+)	frameshift,internal_stop_codon	1725378..1725380(+)	1725491,1725428,1725367,1725357,1725407	WP_011948373.1	ATP-binding protein	88.3	71.8	44.7
MGA_1833	LOCUS_18190	sequence1:1727224..1727628(+)	partial			WP_011393640.1	Rpn family recombination-promoting nuclease/putative transposase	92.5	37.3	54.0
MGA_1839	LOCUS_18250	sequence1:1732581..1733753(+)	partial			WP_011393160.1	glycosyltransferase family 4 protein	73.8	77.2	28.3
MGA_1842	LOCUS_18280	sequence1:1736362..1737300(+)	partial			WP_064496731.1	D-glucuronyl C5-epimerase family protein	48.4	50.8	29.7
MGA_1844	LOCUS_18300	sequence1:1737801..1738532(+)	partial			WP_000862615.1	colanic acid biosynthesis glycosyltransferase WcaL	86.4	51.2	34.1
MGA_1846	LOCUS_18320	sequence1:1739687..1740541(+)	frameshift		1740526	WP_012582958.1	glycosyltransferase family 4 protein	99.6	67.5	54.2
MGA_1847	LOCUS_18330	sequence1:1740589..1740921(+)	frameshift		1740526	WP_012582958.1	glycosyltransferase family 4 protein	88.2	23.4	50.5
MGA_1853	LOCUS_18390	sequence1:1745003..1746358(+)	frameshift		1746313	WP_012048118.1	nucleoside-diphosphate sugar epimerase/dehydratase	93.3	70.4	43.9
MGA_1854	LOCUS_18400	sequence1:1746337..1746888(+)	frameshift		1746316	WP_009897930.1	nucleoside-diphosphate sugar epimerase/dehydratase	90.2	25.9	63.6
MGA_1855	LOCUS_18410	sequence1:1746923..1747084(+)	frameshift		1747075,1747060	WP_004081431.1	SDR family oxidoreductase	94.3	16.2	68.0
MGA_1856	LOCUS_18420	sequence1:1747389..1747871(+)	partial			WP_004081431.1	SDR family oxidoreductase	90.6	46.9	62.1
MGA_1861	LOCUS_18470	sequence1:1753099..1753539(+)	partial			WP_012545693.1	DUF4209 domain-containing protein	94.5	23.6	65.9
MGA_1863	LOCUS_18490	sequence1:1754471..1755574(+)	partial			WP_011021922.1	plasmid pRiA4b ORF-3 family protein	43.1	80.5	33.1
MGA_1866	LOCUS_18520	sequence1:1756976..1757362(+)	frameshift		1757335	WP_011393640.1	Rpn family recombination-promoting nuclease/putative transposase	87.5	33.7	61.6
MGA_1867	LOCUS_18530	sequence1:1757374..1758009(+)	partial			WP_011393565.1	Rpn family recombination-promoting nuclease/putative transposase	90.5	62.1	27.2
MGA_1870	LOCUS_18560	sequence1:1760014..1761096(+)	partial			WP_011393640.1	Rpn family recombination-promoting nuclease/putative transposase	70.6	77.1	53.1
MGA_1893	LOCUS_18790	sequence1:1784204..1784623(+)	partial			WP_012583276.1	CBS domain-containing protein	96.4	46.6	54.1
MGA_1914	LOCUS_19000	sequence1:1802078..1802827(+)	partial			WP_012545556.1	M23 family metallopeptidase	49.4	50.4	47.2
MGA_1919	LOCUS_19050	sequence1:1808098..1808352(+)	frameshift,internal_stop_codon	1808485..1808487(+)	1808402,1808340,1808365	WP_010966780.1	group II intron reverse transcriptase/maturase	96.4	17.4	43.9
MGA_1922	LOCUS_19070	sequence1:1809203..1809544(+)	frameshift		1809008,1809162,1808995,1809141	WP_010966780.1	group II intron reverse transcriptase/maturase	98.2	23.6	63.1
MGA_1925	LOCUS_19100	sequence1:1810756..1811127(+)	partial			WP_003399293.1	LapA family protein	78.0	70.6	35.7
MGA_1930	LOCUS_19150	sequence1:1812502..1813437(+)	frameshift		1813401	WP_010964572.1	GTPase ObgE	96.8	71.2	60.3
MGA_1931	LOCUS_19160	sequence1:1813434..1813772(+)	frameshift		1813407	WP_011254297.1	GTPase ObgE	100.0	27.0	25.4
MGA_1932	LOCUS_19170	sequence1:1814224..1815108(+)	frameshift		1815171,1815240,1815306,1815120,1815249,1815096,1815195,1815228,1815135	WP_010966780.1	group II intron reverse transcriptase/maturase	98.6	61.9	62.2
MGA_1935	LOCUS_19200	sequence1:1817368..1818051(+)	frameshift		1818033	WP_011015884.1	L-erythro-3,5-diaminohexanoate dehydrogenase	98.2	64.3	79.8
MGA_1936	LOCUS_19210	sequence1:1818102..1818407(+)	frameshift		1818033	WP_011015884.1	L-erythro-3,5-diaminohexanoate dehydrogenase	98.0	28.7	75.8
MGA_1952	LOCUS_19370	sequence1:1834891..1835196(+)	frameshift		1835169	WP_011393376.1	membrane protein	90.1	23.6	56.0
MGA_1953	LOCUS_19380	sequence1:1835193..1835939(+)	frameshift		1835172	WP_011393376.1	membrane protein	98.8	63.6	37.4
MGA_1965	LOCUS_19500	sequence1:1847956..1848399(+)	frameshift		1847971	WP_010966859.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	96.6	81.0	47.2
MGA_1969	LOCUS_19540	sequence1:1852219..1852950(+)	frameshift		1852938	WP_012583893.1	nickel pincer cofactor biosynthesis protein LarC	97.5	60.7	51.3
MGA_1970	LOCUS_19550	sequence1:1852958..1853389(+)	frameshift		1852944	WP_012583893.1	nickel pincer cofactor biosynthesis protein LarC	97.2	35.5	49.6
MGA_1971	LOCUS_19560	sequence1:1853405..1853713(-)	frameshift		1853772	WP_010941762.1	phosphate regulon sensor histidine kinase PhoR	92.2	17.0	46.0
MGA_1972	LOCUS_19570	sequence1:1853761..1854744(-)	frameshift		1853781	WP_015775965.1	ATP-binding protein	54.4	48.5	33.9
MGA_1974	LOCUS_19590	sequence1:1855580..1856473(+)	partial			WP_011459351.1	YckD family protein	18.2	47.0	46.3
MGA_1983	LOCUS_19670	sequence1:1864246..1865163(+)	partial			WP_226990734.1	YncE family protein	83.9	59.9	25.8
MGA_1999	LOCUS_19830	sequence1:1883449..1884741(+)	partial			WP_010989569.1	sigma-54-dependent transcriptional regulator	84.2	39.2	48.6
MGA_2000	LOCUS_19840	sequence1:1884907..1885518(+)	partial			WP_011391602.1	LysM peptidoglycan-binding domain-containing protein	83.3	67.4	46.9
MGA_2031	LOCUS_20150	sequence1:1911631..1912983(-)	partial			WP_062280605.1	S-layer homology domain-containing protein	39.6	37.0	26.2
MGA_2032	LOCUS_20160	sequence1:1912950..1913765(-)	frameshift		1912970	WP_041272610.1	S-layer homology domain-containing protein	85.6	33.0	33.2
MGA_2036	LOCUS_20200	sequence1:1915669..1916439(-)	partial			WP_011861615.1	polysaccharide deacetylase family protein	74.2	76.1	42.6
MGA_2038	LOCUS_20220	sequence1:1917285..1918277(-)	frameshift		1917329	WP_003103066.1	amino acid permease	92.7	65.2	37.8
MGA_2042	LOCUS_20260	sequence1:1921235..1921432(-)	frameshift		1921530,1921251	WP_053094988.1	LytTR family DNA-binding domain-containing protein	92.3	23.5	53.3
MGA_2043	LOCUS_20270	sequence1:1921519..1921944(-)	frameshift		1921530,1921251	WP_053094988.1	LytTR family DNA-binding domain-containing protein	87.9	49.0	48.8
MGA_2047	LOCUS_20310	sequence1:1925646..1926512(+)	frameshift		1926494	WP_009896068.1	DNA polymerase I	97.6	31.9	54.8
MGA_2048	LOCUS_20320	sequence1:1926578..1928263(+)	frameshift		1926506	WP_010964413.1	DNA polymerase I	90.6	56.0	51.5
MGA_2049	LOCUS_20330	sequence1:1928275..1928613(+)	frameshift		1928559	WP_000219305.1	dephospho-CoA kinase	77.7	43.5	60.9
MGA_2050	LOCUS_20340	sequence1:1928634..1928870(+)	frameshift		1928610	WP_009926374.1	dephospho-CoA kinase	94.9	37.0	43.2
MGA_2051	LOCUS_20350	sequence1:1929120..1929452(+)	partial			WP_012048036.1	lytic transglycosylase domain-containing protein	98.2	59.7	53.7
MGA_2063	LOCUS_20470	sequence1:1942300..1942905(-)	frameshift		1942897	WP_010965433.1	redox-regulated ATPase YchF	99.5	55.1	60.2
MGA_2064	LOCUS_20480	sequence1:1942895..1943389(-)	frameshift		1942897	WP_005815179.1	redox-regulated ATPase YchF	100.0	45.1	72.1
MGA_2084	LOCUS_20680	sequence1:1964490..1965074(+)	frameshift		1964482	WP_000261975.1	sigma-E processing peptidase SpoIIGA	96.9	68.2	25.0
MGA_2090	LOCUS_20740	sequence1:1968551..1969636(+)	partial			WP_011986853.1	ATP-binding protein	96.4	59.6	46.7
MGA_2094	LOCUS_20780	sequence1:1972609..1972962(+)	frameshift		1972956	WP_010965015.1	phosphate ABC transporter ATP-binding protein PstB	95.7	45.0	74.1
MGA_2095	LOCUS_20790	sequence1:1973112..1973357(+)	frameshift		1972956	WP_011986851.1	phosphate ABC transporter ATP-binding protein PstB	100.0	32.5	80.2
MGA_2098	LOCUS_20820	sequence1:1975099..1976244(+)	partial			WP_011392839.1	stage II sporulation protein P	68.8	62.3	36.2
MGA_2103	LOCUS_20870	sequence1:1978336..1978917(+)	frameshift		1978857	WP_011986849.1	radical SAM protein	90.7	39.4	53.7
MGA_2104	LOCUS_20880	sequence1:1978953..1979651(+)	frameshift		1978860	WP_010965017.1	DUF512 domain-containing protein	98.7	51.9	41.8
MGA_2105	LOCUS_20890	sequence1:1979657..1980598(+)	frameshift		1980556	WP_010965018.1	ribosome biogenesis GTPase Der	96.5	68.9	59.7
MGA_2106	LOCUS_20900	sequence1:1980592..1980975(+)	frameshift		1980562	WP_011392835.1	ribosome biogenesis GTPase Der	98.4	28.5	56.0
MGA_2113	LOCUS_20960	sequence1:1987446..1987814(+)	partial			WP_011393635.1	PAS domain S-box protein	95.1	34.7	38.5
MGA_2116	LOCUS_20990	sequence1:1989120..1989725(+)	partial			WP_010881346.1	lysophospholipid acyltransferase family protein	78.1	73.9	43.0
MGA_2122	LOCUS_21050	sequence1:1994533..1995039(+)	partial			WP_010931878.1	ATP-binding cassette domain-containing protein	92.3	57.6	44.5
MGA_2127	LOCUS_21100	sequence1:1999567..2001147(-)	partial			WP_011986542.1	sigma 54-interacting transcriptional regulator	60.5	53.0	48.1
MGA_2128	LOCUS_21110	sequence1:2001589..2002683(+)	frameshift		2002656	WP_005814314.1	cytosine permease	97.8	79.8	46.3
MGA_2134	LOCUS_21170	sequence1:2008317..2008604(+)	partial			WP_011948232.1	metalloregulator ArsR/SmtB family transcription factor	90.5	71.1	45.3
MGA_2139	LOCUS_21220	sequence1:2011117..2011596(-)	partial			WP_005808714.1	IS110-like element ISDha12 family transposase	96.9	37.1	51.3
MGA_2146	LOCUS_21280	sequence1:2017453..2018046(+)	partial			WP_011392893.1	helix-turn-helix domain-containing protein	61.9	30.8	37.1
MGA_2147	LOCUS_21290	sequence1:2018232..2018807(+)	partial			WP_012584100.1	diguanylate cyclase	89.5	16.0	41.9
MGA_2148	LOCUS_21300	sequence1:2018845..2020212(+)	frameshift		2020203,2020206	WP_011390074.1	methyl-accepting chemotaxis protein	97.6	69.2	42.3
MGA_2149	LOCUS_21310	sequence1:2020227..2020778(+)	frameshift		2020209,2020203	WP_011390074.1	methyl-accepting chemotaxis protein	98.9	28.2	45.3
MGA_2153	LOCUS_21350	sequence1:2024054..2024422(+)	frameshift		2024347	WP_001002908.1	protein-glutamate O-methyltransferase CheR	83.6	35.4	51.0
MGA_2154	LOCUS_21360	sequence1:2024425..2024871(+)	frameshift		2024359	WP_001002908.1	protein-glutamate O-methyltransferase CheR	95.3	49.3	43.0
MGA_2156	LOCUS_21380	sequence1:2025331..2027676(+)	partial			WP_001178896.1	chemotaxis protein CheA	49.2	51.1	42.3
MGA_2157	LOCUS_21390	sequence1:2027679..2028128(+)	frameshift		2028122	WP_011392263.1	chemotaxis protein CheA	77.2	16.8	40.0
MGA_2159	LOCUS_21410	sequence1:2028890..2029165(-)	partial			WP_005837038.1	IS256 family transposase	93.4	21.0	48.2
MGA_2170	LOCUS_21520	sequence1:2041208..2041375(+)	partial			WP_005167041.1	tryptophanase	100.0	11.8	63.6
MGA_2174	LOCUS_21560	sequence1:2043636..2043827(+)	frameshift		2043624	WP_035213920.1	cell division protein SepF	87.3	36.9	49.1
MGA_2177	LOCUS_21590	sequence1:2044918..2045403(+)	partial			WP_010965417.1	DivIVA domain-containing protein	90.1	70.7	48.3
MGA_2188	LOCUS_21700	sequence1:2056740..2057162(+)	frameshift		2057153	WP_010966438.1	anthranilate phosphoribosyltransferase	99.3	42.0	58.3
MGA_2189	LOCUS_21710	sequence1:2057177..2057755(+)	frameshift		2057156	WP_010966438.1	anthranilate phosphoribosyltransferase	96.4	55.9	61.6
MGA_2196	LOCUS_21780	sequence1:2062478..2063122(-)	frameshift		2063135	WP_003400106.1	methionine gamma-lyase	100.0	53.8	53.7
MGA_2197	LOCUS_21790	sequence1:2063112..2063660(-)	frameshift		2063141	WP_011071933.1	methionine gamma-lyase	81.3	37.3	49.3
MGA_2201	LOCUS_21830	sequence1:2065449..2065634(+)	partial			WP_004080225.1	PspC domain-containing protein	95.1	45.7	63.8
MGA_2202	LOCUS_21840	sequence1:2066014..2067285(+)	partial			WP_011948155.1	DUF5050 domain-containing protein	59.8	45.5	36.4
MGA_2205	LOCUS_21870	sequence1:2069015..2069290(+)	partial			WP_012869135.1	nitroreductase family protein	57.1	24.4	46.2
MGA_2206	LOCUS_21880	sequence1:2069290..2069880(+)	frameshift		2069829	WP_005477770.1	sulfite exporter TauE/SafE family protein	88.8	69.1	39.5
MGA_2212	LOCUS_21940	sequence1:2077461..2078672(+)	partial			WP_012546434.1	CRISPR-associated protein	65.8	62.5	28.6
MGA_2213	LOCUS_21950	sequence1:2078659..2080692(+)	partial			WP_012545561.1	CRISPR-associated protein Csx11	90.0	60.2	25.5
MGA_2215	LOCUS_21970	sequence1:2081716..2082207(+)	frameshift		2082192	WP_010875964.1	type III-B CRISPR module RAMP protein Cmr4	53.4	31.4	45.6
MGA_2216	LOCUS_21980	sequence1:2082333..2082764(+)	frameshift		2082192	WP_010875964.1	type III-B CRISPR module RAMP protein Cmr4	73.4	33.4	54.3
MGA_2224	LOCUS_22060	sequence1:2090467..2092878(+)	frameshift		2092835,2090347,2092807	WP_011016371.1	DEAD/DEAH box helicase	99.9	80.4	44.6
MGA_2227	LOCUS_22090	sequence1:2095535..2095954(+)	frameshift		2095945	WP_011016374.1	type III restriction-modification system endonuclease	93.5	13.5	48.9
MGA_2229	LOCUS_22110	sequence1:2098787..2100157(+)	frameshift		2100136	WP_011459236.1	DUF3578 domain-containing protein	66.9	33.1	51.0
MGA_2230	LOCUS_22120	sequence1:2100169..2100507(+)	frameshift		2100142	WP_011459236.1	DUF3578 domain-containing protein	99.1	12.6	60.2
MGA_2245	LOCUS_22270	sequence1:2113640..2113873(-)	partial			WP_011948973.1	M14 family metallopeptidase	88.3	16.1	55.9
MGA_2247	LOCUS_22290	sequence1:2115226..2115492(+)	frameshift		2115471	WP_011947991.1	tRNA 2-thiocytidine(32) synthetase TtcA	97.7	35.4	50.0
MGA_2248	LOCUS_22300	sequence1:2115447..2115932(+)	frameshift		2115471	WP_003435803.1	tRNA 2-thiocytidine(32) synthetase TtcA	90.1	59.4	55.9
MGA_2255	LOCUS_22360	sequence1:2122484..2122825(-)	frameshift		2122998	WP_010966780.1	group II intron reverse transcriptase/maturase	98.2	23.6	63.1
MGA_2256	LOCUS_22370	sequence1:2123322..2123717(-)	frameshift		2123297,2123335,2123720,2123242,2123787,2123148,2123313,2123733	WP_010966780.1	group II intron reverse transcriptase/maturase	98.5	27.4	66.7
MGA_2258	LOCUS_22390	sequence1:2124642..2124980(-)	frameshift		2124994	WP_010965410.1	NFACT RNA binding domain-containing protein	100.0	19.5	65.2
MGA_2259	LOCUS_22400	sequence1:2124971..2126353(-)	frameshift		2125000	WP_011861612.1	NFACT RNA binding domain-containing protein	97.2	77.0	43.2
MGA_2270	LOCUS_22510	sequence1:2135170..2135385(+)	frameshift		2135367	WP_011861609.1	methionyl-tRNA formyltransferase	93.0	21.4	60.6
MGA_2271	LOCUS_22520	sequence1:2135457..2136098(+)	frameshift		2135367	WP_003388615.1	methionyl-tRNA formyltransferase	99.1	67.7	50.9
MGA_2279	LOCUS_22600	sequence1:2143471..2143773(+)	frameshift		2143770	WP_003431138.1	ribulose-phosphate 3-epimerase	99.0	45.3	71.3
MGA_2280	LOCUS_22610	sequence1:2143869..2144120(+)	frameshift		2143770	WP_003564711.1	ribulose-phosphate 3-epimerase	98.8	38.0	53.7
MGA_2286	LOCUS_22670	sequence1:2147414..2148499(+)	frameshift		2148472	WP_004454871.1	ATP-dependent DNA helicase RecG	98.3	52.0	44.4
MGA_2287	LOCUS_22680	sequence1:2148583..2149458(+)	frameshift		2148472	WP_004454871.1	ATP-dependent DNA helicase RecG	99.3	42.6	58.9
MGA_2294	LOCUS_22750	sequence1:2152770..2153693(-)	frameshift		2153761,2153754	WP_011392455.1	sporulation integral membrane protein YlbJ	79.8	60.9	36.7
MGA_2296	LOCUS_22770	sequence1:2154028..2154465(-)	frameshift		2154506	WP_011861133.1	nucleotidyltransferase	97.9	35.9	39.2
MGA_2297	LOCUS_22780	sequence1:2154495..2155232(-)	frameshift,internal_stop_codon	2154519..2154521(-)	2154539	WP_003388463.1	nucleotidyltransferase	92.2	56.7	54.3
MGA_2303	LOCUS_22840	sequence1:2159063..2159557(+)	frameshift		2159545	WP_041272448.1	phosphate acyltransferase PlsX	98.2	48.8	50.0
MGA_2304	LOCUS_22850	sequence1:2159550..2160062(+)	frameshift		2159545	WP_041272448.1	phosphate acyltransferase PlsX	92.9	47.6	54.7
MGA_2315	LOCUS_22960	sequence1:2167710..2169125(+)	frameshift		2169014	WP_003232028.1	chromosome segregation protein SMC	90.2	35.9	42.2
MGA_2316	LOCUS_22970	sequence1:2169128..2170141(+)	frameshift		2170123,2170403,2169122,2170130	WP_012047863.1	chromosome segregation protein SMC	94.1	26.6	33.7
MGA_2317	LOCUS_22980	sequence1:2170168..2171298(+)	frameshift		2170132	WP_010965058.1	chromosome segregation protein SMC	97.3	30.7	40.9
MGA_2318	LOCUS_22990	sequence1:2171291..2172247(+)	partial			WP_011861159.1	signal recognition particle-docking protein FtsY	99.1	74.6	57.8
MGA_2319	LOCUS_23000	sequence1:2172347..2172700(+)	partial			WP_003419333.1	putative DNA-binding protein	73.5	64.8	57.0
MGA_2326	LOCUS_23070	sequence1:2176255..2176425(+)	frameshift		2176395,2176404,2176581	WP_009967235.1	ribosome biogenesis GTPase YlqF	87.5	17.4	65.3
MGA_2328	LOCUS_23090	sequence1:2176594..2177085(+)	frameshift		2176392,2176593,2176407	WP_010965068.1	ribosome biogenesis GTPase YlqF	97.5	56.5	57.5
MGA_2331	LOCUS_23120	sequence1:2179641..2179844(+)	frameshift		2179808	WP_011125215.1	tryptophan--tRNA ligase	86.6	17.1	65.5
MGA_2332	LOCUS_23130	sequence1:2179820..2180623(+)	frameshift		2179820	WP_000110984.1	tryptophan--tRNA ligase	99.6	81.2	57.7
MGA_2336	LOCUS_23170	sequence1:2182947..2183777(+)	frameshift		2183762	WP_012047858.1	type I DNA topoisomerase	99.3	39.5	61.1
MGA_2337	LOCUS_23180	sequence1:2183771..2185027(+)	frameshift		2183768	WP_003245599.1	type I DNA topoisomerase	99.5	59.9	54.8
MGA_2339	LOCUS_23200	sequence1:2185650..2186042(+)	frameshift		2186048,2185991	WP_181406033.1	ATP-dependent protease ATPase subunit HslU	85.4	24.9	72.1
MGA_2340	LOCUS_23210	sequence1:2186095..2186370(+)	frameshift		2186003,2186123,2186342	WP_010880072.1	ATP-dependent protease ATPase subunit HslU	60.4	12.2	43.6
MGA_2341	LOCUS_23220	sequence1:2186346..2187026(+)	frameshift		2186340	WP_010880072.1	ATP-dependent protease ATPase subunit HslU	99.1	49.8	69.2
MGA_2348	LOCUS_23290	sequence1:2191827..2192597(+)	partial			WP_002556888.1	flagellar assembly protein FliH	90.6	70.6	21.6
MGA_2350	LOCUS_23310	sequence1:2193906..2194349(+)	partial			WP_000819760.1	flagellar export protein FliJ	93.2	71.8	26.3
MGA_2353	LOCUS_23340	sequence1:2196329..2196724(+)	partial			WP_011392298.1	flagellar hook capping FlgD N-terminal domain-containing protein	67.2	61.4	54.9
MGA_2367	LOCUS_23480	sequence1:2206831..2207121(+)	partial			WP_011986949.1	flagellar biosynthesis protein FlhF	92.7	22.3	39.6
MGA_2368	LOCUS_23490	sequence1:2207166..2207855(+)	partial			WP_010943680.1	flagellar biosynthesis protein FlhF	77.7	39.5	47.8
MGA_2371	LOCUS_23520	sequence1:2209343..2209927(+)	partial			WP_004083251.1	chemotaxis response regulator protein-glutamate methylesterase	94.3	53.8	47.0
MGA_2377	LOCUS_23580	sequence1:2214216..2215580(+)	partial			WP_000535110.1	FapA family protein	98.2	69.3	29.9
MGA_2386	LOCUS_23670	sequence1:2220610..2221161(+)	frameshift		2221155	WP_011861463.1	1-deoxy-D-xylulose-5-phosphate reductoisomerase	98.9	47.9	58.7
MGA_2387	LOCUS_23680	sequence1:2221158..2221757(+)	frameshift		2221146	WP_010965101.1	1-deoxy-D-xylulose-5-phosphate reductoisomerase	98.5	50.6	58.2
MGA_2390	LOCUS_23710	sequence1:2223835..2224455(+)	partial			WP_011391991.1	PIG-L family deacetylase	97.1	28.7	47.0
MGA_2400	LOCUS_23810	sequence1:2235208..2235537(+)	frameshift		2235525	WP_011108346.1	bifunctional riboflavin kinase/FAD synthetase	97.2	32.8	39.6
MGA_2401	LOCUS_23820	sequence1:2235567..2236157(+)	frameshift		2235528,2235532	WP_010965112.1	bifunctional riboflavin kinase/FAD synthetase	91.8	59.4	46.7
MGA_2404	LOCUS_23850	sequence1:2238768..2239484(+)	partial			WP_000868217.1	polysaccharide deacetylase family protein	81.9	65.2	44.6
MGA_2412	LOCUS_23930	sequence1:2244717..2245973(+)	frameshift		2244657	WP_010965118.1	DNA translocase FtsK	99.3	55.0	70.4
MGA_2421	LOCUS_24020	sequence1:2253756..2254082(+)	frameshift		2254073	WP_011392599.1	PHP domain-containing protein	91.7	35.4	44.4
MGA_2422	LOCUS_24030	sequence1:2254118..2254591(+)	frameshift		2254076	WP_011459951.1	PHP domain-containing protein	76.4	42.0	55.0
MGA_2432	LOCUS_24130	sequence1:2263349..2263981(-)	partial			WP_011861409.1	DNA mismatch repair endonuclease MutL	88.1	28.2	42.8
MGA_2433	LOCUS_24140	sequence1:2264032..2265186(-)	partial			WP_011861409.1	DNA mismatch repair endonuclease MutL	96.9	55.1	42.7
MGA_2438	LOCUS_24190	sequence1:2270615..2270980(-)	frameshift,internal_stop_codon	2270981..2270983(-)	2271008,2270963,2270966	WP_011227748.1	30S ribosomal protein S1	92.6	21.8	37.6
MGA_2439	LOCUS_24200	sequence1:2270865..2271710(-)	frameshift		2270963,2271708	WP_010965152.1	bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1	83.6	36.9	41.6
MGA_2440	LOCUS_24210	sequence1:2271703..2271933(-)	frameshift		2272004,2271716	WP_012047676.1	bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1	86.8	10.3	59.1
MGA_2441	LOCUS_24220	sequence1:2271939..2272568(-)	frameshift		2272007	WP_010965152.1	bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1	89.0	28.8	46.2
MGA_2444	LOCUS_24250	sequence1:2273405..2273542(-)	frameshift		2273619,2273412	WP_002990268.1	(d)CMP kinase	97.8	19.5	59.1
MGA_2445	LOCUS_24260	sequence1:2273599..2273823(-)	frameshift		2273625,2273409	WP_003439454.1	(d)CMP kinase	94.6	32.4	51.4
MGA_2446	LOCUS_24270	sequence1:2273834..2273998(-)	internal_stop_codon	2273834..2273836(-)		WP_007325001.1	chorismate mutase	98.1	38.3	44.4
MGA_2454	LOCUS_24350	sequence1:2280177..2280395(-)	frameshift		2280373	WP_011250080.1	2-oxoacid:ferredoxin oxidoreductase subunit beta	90.3	22.6	40.0
MGA_2455	LOCUS_24360	sequence1:2280341..2281000(-)	frameshift		2280373	WP_010942115.1	2-oxoacid:ferredoxin oxidoreductase subunit beta	94.1	75.5	61.7
MGA_2461	LOCUS_24420	sequence1:2283969..2284568(-)	partial			WP_071521818.1	SafA/ExsA family spore coat assembly protein	81.9	51.6	59.8
MGA_2463	LOCUS_24440	sequence1:2286156..2286680(-)	frameshift,internal_stop_codon	2286713..2286715(-)	2286721	WP_005808139.1	agmatinase	99.4	59.1	49.7
MGA_2464	LOCUS_24450	sequence1:2286680..2287021(-)	frameshift,internal_stop_codon	2286713..2286715(-)	2286733	WP_005808139.1	agmatinase	84.1	32.6	53.7
MGA_2477	LOCUS_24580	sequence1:2296121..2296642(-)	frameshift		2296646	WP_011986419.1	segregation/condensation protein A	93.6	68.5	32.9
MGA_2478	LOCUS_24590	sequence1:2296617..2296853(-)	frameshift		2296646	WP_010942476.1	segregation/condensation protein A	88.5	25.7	62.3
MGA_2480	LOCUS_24610	sequence1:2297467..2298633(-)	partial			WP_004081021.1	CBS domain-containing protein	95.9	46.5	32.8
MGA_2489	LOCUS_24700	sequence1:2303914..2304435(-)	frameshift		2304466	WP_000390088.1	site-specific tyrosine recombinase XerD	93.1	56.1	53.0
MGA_2490	LOCUS_24710	sequence1:2304446..2304787(-)	frameshift		2304466	WP_011393010.1	site-specific tyrosine recombinase XerD	92.9	35.9	36.8
MGA_2498	LOCUS_24790	sequence1:2310983..2311966(-)	frameshift		2311968	WP_003428389.1	putative cytokinetic ring protein SteA	93.6	82.0	64.4
MGA_2499	LOCUS_24800	sequence1:2311954..2312103(-)	frameshift		2311968	WP_003428389.1	putative cytokinetic ring protein SteA	91.8	12.1	64.4
MGA_2502	LOCUS_24830	sequence1:2314643..2315290(-)	frameshift,internal_stop_codon	2315338..2315340(-)	2315343	WP_010965373.1	DNA repair protein RecN	98.6	37.4	48.4
MGA_2503	LOCUS_24840	sequence1:2315326..2316342(-)	frameshift,internal_stop_codon	2315338..2315340(-)	2315343	WP_000947750.1	DNA repair protein RecN	98.5	56.8	38.9
MGA_2518	LOCUS_24990	sequence1:2328096..2328677(-)	partial			WP_003428419.1	stage III sporulation protein AG	71.0	72.3	40.9
MGA_2524	LOCUS_25050	sequence1:2331554..2331775(-)	frameshift		2331801	WP_010965393.1	stage III sporulation protein AA	74.0	17.7	53.7
MGA_2525	LOCUS_25060	sequence1:2331790..2332326(-)	frameshift		2331801,2332327	WP_003358945.1	stage III sporulation protein AA	97.8	56.4	55.7
MGA_2532	LOCUS_25130	sequence1:2336514..2336906(-)	frameshift		2336901	WP_012546492.1	glutamate 5-kinase	92.3	32.9	60.0
MGA_2564	LOCUS_25450	sequence1:2363442..2364215(-)	frameshift		2364226	WP_011393149.1	AI-2E family transporter	98.4	73.6	29.1
MGA_2566	LOCUS_25470	sequence1:2364732..2365340(-)	frameshift		2365390	WP_010965531.1	tRNA 2-thiouridine(34) synthase MnmA	98.0	55.8	53.0
MGA_2567	LOCUS_25480	sequence1:2365376..2365894(-)	frameshift		2365381	WP_003438277.1	tRNA 2-thiouridine(34) synthase MnmA	84.9	40.1	55.5
MGA_2572	LOCUS_25530	sequence1:2368287..2368628(-)	frameshift		2368642	WP_009895468.1	GlmL-related ornithine degradation protein	94.7	23.0	44.4
MGA_2573	LOCUS_25540	sequence1:2368601..2369632(-)	frameshift		2368642	WP_009895468.1	GlmL-related ornithine degradation protein	88.3	65.7	64.3
MGA_2590	LOCUS_25710	sequence1:2385478..2385888(-)	frameshift		2385994	WP_003422921.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	99.3	18.5	47.8
MGA_2591	LOCUS_25720	sequence1:2385956..2387638(-)	frameshift		2386003	WP_196768340.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	97.1	75.6	64.1
MGA_2593	LOCUS_25740	sequence1:2388218..2389573(-)	frameshift		2389659	WP_010989737.1	single-stranded-DNA-specific exonuclease RecJ	44.1	25.9	32.4
MGA_2594	LOCUS_25750	sequence1:2389651..2390328(-)	frameshift		2390339,2389661	WP_011861665.1	single-stranded-DNA-specific exonuclease RecJ	98.7	27.8	54.2
MGA_2595	LOCUS_25760	sequence1:2390337..2390651(-)	frameshift,internal_stop_codon	2390337..2390339(-)	2390333	WP_011987047.1	single-stranded-DNA-specific exonuclease RecJ	94.2	16.5	36.0
MGA_2600	LOCUS_25810	sequence1:2395140..2395772(-)	frameshift		2395806,2395935	WP_010965577.1	thioether cross-link-forming SCIFF peptide maturase	93.3	43.4	55.3
MGA_2601	LOCUS_25820	sequence1:2395769..2395906(-)	frameshift		2395806,2395935	WP_012048084.1	thioether cross-link-forming SCIFF peptide maturase	91.1	9.0	58.5
MGA_2602	LOCUS_25830	sequence1:2395933..2396523(-)	frameshift		2395809,2395938	WP_011861666.1	thioether cross-link-forming SCIFF peptide maturase	98.0	42.0	56.0
MGA_2607	LOCUS_25880	sequence1:2399776..2401362(-)	partial			WP_011393198.1	SpoIID/LytB domain-containing protein	60.8	73.0	35.9
MGA_2623	LOCUS_26040	sequence1:2411457..2411618(-)	partial			WP_011815235.1	IS256 family transposase	84.9	11.2	55.6
MGA_2636	LOCUS_26170	sequence1:2422511..2423053(+)	frameshift		2422457	WP_010964844.1	TetR/AcrR family transcriptional regulator	99.4	84.6	31.3
MGA_2638	LOCUS_26190	sequence1:2423840..2424073(+)	frameshift		2424061	WP_012582780.1	FtsX-like permease family protein	94.8	9.9	42.5
MGA_2644	LOCUS_26250	sequence1:2431610..2431942(-)	frameshift		2431618	WP_010972874.1	ROK family transcriptional regulator	89.1	25.3	34.7
MGA_2645	LOCUS_26260	sequence1:2432096..2433448(+)	partial			WP_011391991.1	PIG-L family deacetylase	59.6	39.7	40.0
MGA_2648	LOCUS_26290	sequence1:2435006..2435254(-)	partial			WP_011392234.1	SHOCT domain-containing protein	69.5	76.3	48.3
MGA_2651	LOCUS_26320	sequence1:2438329..2438793(-)	frameshift		2438906	WP_011948714.1	response regulator transcription factor	99.4	66.1	62.3
MGA_2654	LOCUS_26350	sequence1:2440026..2440304(+)	frameshift		2440280	WP_010941521.1	TMEM165/GDT1 family protein	90.2	44.3	45.9
MGA_2656	LOCUS_26370	sequence1:2440665..2441324(-)	partial			WP_010966780.1	group II intron reverse transcriptase/maturase	99.1	46.2	64.5
MGA_2661	LOCUS_26410	sequence1:2443710..2445083(-)	partial			WP_011986771.1	HAMP domain-containing sensor histidine kinase	54.7	60.3	47.8
MGA_2662	LOCUS_26420	sequence1:2445073..2445531(-)	frameshift		2445560	WP_041272297.1	response regulator transcription factor	98.0	65.9	57.0
MGA_2663	LOCUS_26430	sequence1:2445558..2445761(-)	frameshift		2445566	WP_002262121.1	response regulator GcrR	100.0	29.1	62.7
MGA_2682	LOCUS_26620	sequence1:2461561..2461914(+)	frameshift		2461893	WP_011861659.1	transporter	94.9	24.3	38.7
MGA_2687	LOCUS_26670	sequence1:2464133..2464708(-)	frameshift		2464734	WP_048053727.1	SLC45 family MFS transporter	79.6	39.0	38.3
MGA_2688	LOCUS_26680	sequence1:2464723..2465337(-)	frameshift		2464749	WP_010867389.1	SLC45 family MFS transporter	90.7	41.8	48.1
MGA_2691	LOCUS_26710	sequence1:2467970..2468650(+)	frameshift		2468629	WP_011392745.1	M48 family metallopeptidase	95.6	52.5	41.5
MGA_2692	LOCUS_26720	sequence1:2468661..2469203(+)	frameshift		2468629	WP_011392745.1	M48 family metallopeptidase	97.2	42.9	48.6
MGA_2696	LOCUS_26760	sequence1:2472374..2472754(+)	partial			WP_003359341.1	LysR family transcriptional regulator	81.0	34.8	52.0
MGA_2704	LOCUS_26840	sequence1:2478433..2479794(-)	frameshift		2479771	WP_011948032.1	ribonuclease R	98.9	61.7	58.8
MGA_2705	LOCUS_26850	sequence1:2479703..2480596(-)	frameshift		2479786	WP_011948032.1	ribonuclease R	92.6	37.9	52.9
MGA_2708	LOCUS_26880	sequence1:2483913..2484569(-)	frameshift		2484618,2484606	WP_011460836.1	pyruvate, water dikinase regulatory protein	99.1	79.9	54.1
MGA_2712	LOCUS_26920	sequence1:2487249..2487473(-)	frameshift		2487242,2487269	WP_010964609.1	DUF4342 domain-containing protein	86.5	32.5	53.1
MGA_2718	LOCUS_26980	sequence1:2491047..2492231(-)	frameshift		2492221	WP_012047997.1	HDIG domain-containing protein	96.2	54.8	49.6
MGA_2731	LOCUS_27110	sequence1:2501802..2502125(-)	frameshift,internal_stop_codon	2501757..2501759(-)	2501819,2501771,2501603	WP_012048001.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	97.2	41.7	41.9
MGA_2733	LOCUS_27130	sequence1:2503151..2504002(-)	frameshift		2503159,2503991	WP_004454751.1	molecular chaperone DnaJ	90.8	66.7	56.4
MGA_2734	LOCUS_27140	sequence1:2503962..2504246(-)	frameshift		2503982	WP_011392123.1	molecular chaperone DnaJ	79.8	19.6	72.0
MGA_2736	LOCUS_27160	sequence1:2506155..2506340(-)	frameshift		2506333	WP_004454752.1	nucleotide exchange factor GrpE	95.1	28.2	62.1
MGA_2737	LOCUS_27170	sequence1:2506322..2506744(-)	frameshift		2506345	WP_005816478.1	nucleotide exchange factor GrpE	55.7	38.0	44.4
MGA_2740	LOCUS_27200	sequence1:2509008..2510360(-)	frameshift		2510371	WP_005816487.1	translation elongation factor 4	99.6	74.5	67.6
MGA_2741	LOCUS_27210	sequence1:2510357..2510818(-)	frameshift		2510377	WP_011392118.1	translation elongation factor 4	99.3	25.2	77.6
MGA_2744	LOCUS_27240	sequence1:2512255..2512653(-)	frameshift		2512697	WP_011861168.1	membrane protein	78.0	14.2	33.0
MGA_2745	LOCUS_27250	sequence1:2512689..2513393(-)	frameshift		2512703	WP_011861168.1	membrane protein	67.1	21.4	30.5
MGA_2748	LOCUS_27280	sequence1:2514524..2515717(-)	partial			WP_011392115.1	stage II sporulation protein P	62.5	62.0	36.4
MGA_2760	LOCUS_27400	sequence1:2523521..2524063(-)	frameshift		2524112	WP_009897308.1	DHHA1 domain-containing protein	93.9	42.9	25.7
MGA_2761	LOCUS_27410	sequence1:2524074..2524724(-)	frameshift		2524106,2523931	WP_010964224.1	alanyl-tRNA editing protein	96.3	53.7	46.2
MGA_2775	LOCUS_27540	sequence1:2537161..2537334(-)	frameshift		2537339	WP_033582077.1	ribosome silencing factor	73.7	39.3	66.7
MGA_2776	LOCUS_27550	sequence1:2537274..2537513(-)	frameshift		2537324	WP_010880811.1	ribosome silencing factor	72.2	52.3	52.6
