{
    "type": "genome",
    "identifier": "GCF_000263195.1",
    "organism": "Emticicia oligotrophica DSM 17448",
    "title": "Emticicia oligotrophica DSM 17448",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
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        "bioproject": "PRJNA224116",
        "biosample": "SAMN02232019",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "929562",
        "species_taxid": "312279",
        "organism_name": "Emticicia oligotrophica DSM 17448",
        "infraspecific_name": "strain=DSM 17448",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2012/05/17",
        "asm_name": "ASM26319v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_000263195.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/263/195/GCF_000263195.1_ASM26319v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
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        "genome_size_ungapped": "5220361",
        "gc_percent": "35.500000",
        "replicon_count": "6",
        "scaffold_count": "6",
        "contig_count": "6",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000263195.1-RS_2024_09_16",
        "annotation_date": "2024-09-16",
        "total_gene_count": "4339",
        "protein_coding_gene_count": "4277",
        "non_coding_gene_count": "49",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2012-05-17",
    "dateModified": "2012-05-17",
    "datePublished": "2012-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Emticicia oligotrophica DSM 17448"
        ],
        "sample_taxid": [
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
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        ],
        "sample_host_location_id": [],
        "data_size": "1.458 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
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            "max": null
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        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
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        "Longest Sequences (bp)": "4798158",
        "N50 (bp)": "4798158",
        "Gap Ratio (%)": "0.000000",
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        "Number of CDSs": "4259",
        "Average Protein Length": "360.5",
        "Coding Ratio (%)": "88.2",
        "Number of rRNAs": "4",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
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            {
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                "status": "below_threshold"
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                "organism_name": "Lacihabitans soyangensis",
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                "species_taxid": 869394,
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                "status": "below_threshold"
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            {
                "organism_name": "Dyadobacter subterraneus",
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                "ani_threshold": 95,
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        ],
        "cc_result": {
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            "strain_heterogeneity": 0.0
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                "accession": "GCA_000263195.1",
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    "_bac2feature": {
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        "cell_diameter": -0.523,
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        "doubling_h": null,
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        "bacillus_cell_shape": 1.0,
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    "_genome_taxon": [
        "Emticicia",
        "oligotrophica",
        "DSM",
        "17448"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}