{ "type": "genome", "identifier": "GCF_000264295.1", "organism": "Rhodanobacter spathiphylli B39", "title": "Rhodanobacter spathiphylli B39", "description": "na", "data type": "Genome sequencing and assembly", "organization": "NIH", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000264295.1", "bioproject": "PRJNA224116", "biosample": "SAMN02469836", "wgs_master": "AJXT00000000.1", "refseq_category": "reference genome", "taxid": "1163407", "species_taxid": "347483", "organism_name": "Rhodanobacter spathiphylli B39", "infraspecific_name": "strain=B39", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2012/05/23", "asm_name": "Rh17631", "asm_submitter": "NIH", "gbrs_paired_asm": "GCA_000264295.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/295/GCF_000264295.1_Rh17631", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3910579", "genome_size_ungapped": "3910579", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "203", "contig_count": "203", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000264295.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "3571", "protein_coding_gene_count": "3468", "non_coding_gene_count": "56", "pubmed_id": "22843592" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2012-05-23", "dateModified": "2012-05-23", "datePublished": "2012-05-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodanobacter spathiphylli B39" ], "sample_taxid": [ "1163407" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "1.071 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3910579", "Number of Sequences": "203", "Longest Sequences (bp)": "715926", "N50 (bp)": "115821", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "66.5", "Number of CDSs": "3427", "Average Protein Length": "334.6", "Coding Ratio (%)": "88.0", "Number of rRNAs": "4", "Number of tRNAs": "50", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Rhodanobacter spathiphylli", "strain": "strain=B39", "accession": "GCA_000264295.1", "taxid": 347483, "species_taxid": 347483, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1248, "total_fragments": 1252, "ani_threshold": 95, "status": "conclusive" }, { 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