# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_34	LOCUS_00330	sequence1:30221..30757(+)	frameshift		30149	WP_013097078.1	23S rRNA pseudouridine(2457) synthase RluE	97.2	79.7	79.8
MGA_70	LOCUS_00690	sequence1:66025..70797(-)	partial			WP_001045650.1	serine protease autotransporter toxin Pic	67.5	77.0	39.8
MGA_87	LOCUS_00860	sequence1:85793..86299(+)	partial			WP_003780110.1	YadA-like family protein	69.0	14.7	48.9
MGA_106	LOCUS_01050	sequence1:107977..108321(-)	partial			WP_000114014.1	tail fiber assembly protein	47.4	49.5	51.9
MGA_114	LOCUS_01130	sequence1:114854..116119(+)	partial			WP_002211138.1	flagellar hook-length control protein FliK	57.0	52.4	42.6
MGA_118	LOCUS_01170	sequence1:118176..118571(+)	partial			WP_019080841.1	flagellar biosynthetic protein FliO	96.2	72.0	48.9
MGA_167	LOCUS_01660	sequence1:172668..176591(-)	partial			WP_005171070.1	DNA translocase FtsK	68.8	73.7	57.5
MGA_180	LOCUS_01790	sequence1:188375..189034(-)	partial			WP_004194127.1	A24 family peptidase	75.3	53.3	42.5
MGA_208	LOCUS_02070	sequence1:215067..215603(-)	frameshift		215631	WP_000189165.1	nitroreductase NfsA	99.4	73.8	70.1
MGA_209	LOCUS_02080	sequence1:215617..215787(-)	frameshift		215631	WP_013097374.1	nitroreductase NfsA	98.2	22.9	70.9
MGA_219	LOCUS_02180	sequence1:224875..225480(-)	partial			WP_000261298.1	pilus-assembly fibrillin subunit	38.3	39.9	46.8
MGA_233	LOCUS_02320	sequence1:240901..242217(-)	frameshift		242207	WP_011815615.1	O-antigen ligase-like protein WaaL-xs	98.9	78.3	34.2
MGA_237	LOCUS_02360	sequence1:245492..246085(-)	partial			WP_005167314.1	fimbrial protein	71.1	84.1	43.7
MGA_243	LOCUS_02420	sequence1:251539..251817(-)	frameshift		251882	WP_002209720.1	fimbrial protein	95.7	50.6	42.9
MGA_244	LOCUS_02430	sequence1:251799..252071(-)	frameshift		251882	WP_005163272.1	fimbrial protein	73.3	37.4	54.5
MGA_246	LOCUS_02450	sequence1:254355..255086(+)	partial			WP_005762543.1	LysR family transcriptional regulator	66.7	52.8	24.2
MGA_248	LOCUS_02470	sequence1:258217..258957(+)	partial			WP_011707882.1	glycosyltransferase family 25 protein	68.7	80.5	30.4
MGA_298	LOCUS_02960	sequence1:312643..313587(-)	partial			WP_011817287.1	sensor domain-containing diguanylate cyclase	68.2	41.2	33.2
MGA_398	LOCUS_03960	sequence1:421257..421865(-)	partial			WP_012132918.1	thioredoxin domain-containing protein	74.8	72.5	56.3
MGA_439	LOCUS_04370	sequence1:467595..467828(-)	partial			WP_000074110.1	heme exporter protein CcmD	59.7	65.7	52.2
MGA_447	LOCUS_04450	sequence1:475306..475662(-)	partial			WP_000114014.1	tail fiber assembly protein	53.4	63.3	58.0
MGA_448	LOCUS_04460	sequence1:475662..477392(-)	partial			WP_011069442.1	prophage tail fiber N-terminal domain-containing protein	22.6	30.3	40.8
MGA_481	LOCUS_04790	sequence1:505325..505543(-)	partial			WP_010930566.1	transcriptional repressor LexA	91.7	30.6	63.6
MGA_484	LOCUS_04820	sequence1:507103..507429(-)	frameshift		507123	WP_000153268.1	phage N-6-adenine-methyltransferase	99.1	61.1	72.9
MGA_496	LOCUS_04940	sequence1:513649..513882(+)	frameshift,internal_stop_codon	513490..513492(+)	513864	WP_001289936.1	ead/Ea22-like family protein	93.5	26.8	69.4
MGA_510	LOCUS_05080	sequence1:527062..527310(-)	frameshift,internal_stop_codon	527476..527478(-)	527503	WP_046092923.1	IS630-like element ISEc33 family transposase	98.8	23.6	86.4
MGA_512	LOCUS_05100	sequence1:528162..528389(-)	internal_stop_codon	528537..528539(-),528450..528452(-)		WP_013097610.1	ParB/RepB/Spo0J family partition protein	97.3	35.1	69.9
MGA_513	LOCUS_05110	sequence1:528537..528722(-)	internal_stop_codon	528537..528539(-),528450..528452(-)		WP_000502955.1	ParB/RepB/Spo0J family partition protein	96.7	28.2	55.9
MGA_523	LOCUS_05210	sequence1:541207..541800(-)	frameshift,internal_stop_codon	541957..541959(-),541900..541902(-)	541272	WP_046092923.1	IS630-like element ISEc33 family transposase	89.3	51.3	84.1
MGA_524	LOCUS_05220	sequence1:541957..542181(-)	frameshift,internal_stop_codon	541899..541901(-),541956..541958(-)	542195	WP_011114740.1	IS630-like element IS630 family transposase	100.0	21.6	91.9
MGA_525	LOCUS_05230	sequence1:542376..542627(-)	partial			WP_001302976.1	IS3 family transposase	100.0	28.1	57.8
MGA_526	LOCUS_05240	sequence1:542778..542933(-)	internal_stop_codon	542778..542780(-)		WP_000165090.1	transposase	82.4	38.9	57.1
MGA_535	LOCUS_05330	sequence1:554351..554785(+)	frameshift		554656	WP_015038705.1	GTP-binding protein	63.2	24.4	52.7
MGA_536	LOCUS_05340	sequence1:554728..555489(+)	frameshift		554656	WP_003094852.1	GTPase	89.3	63.2	42.3
MGA_540	LOCUS_05380	sequence1:557820..558188(+)	partial			WP_000275180.1	AraC family transcriptional regulator	84.4	74.6	53.4
MGA_546	LOCUS_05440	sequence1:564744..565172(-)	partial			WP_167691470.1	IS3 family transposase	100.0	38.8	76.1
MGA_553	LOCUS_05510	sequence1:571502..571684(-)	frameshift,internal_stop_codon	571924..571926(-)	571761,571701,571647	WP_085955172.1	IS3 family transposase	83.3	12.4	64.0
MGA_581	LOCUS_05790	sequence1:601527..601793(+)	partial			WP_011816913.1	gamma-glutamyltransferase	89.8	13.5	77.2
MGA_604	LOCUS_06020	sequence1:628159..629376(-)	partial			WP_202694179.1	cell envelope integrity protein TolA	33.3	31.0	66.7
MGA_715	LOCUS_07120	sequence1:754284..754616(-)	partial			WP_005170563.1	acid-activated periplasmic chaperone HdeB	61.8	66.0	54.4
MGA_750	LOCUS_07470	sequence1:791089..791442(-)	partial			WP_000114014.1	tail fiber assembly protein	66.7	74.3	52.4
MGA_751	LOCUS_07480	sequence1:791445..792182(-)	partial			WP_000554647.1	hypothetical protein	66.1	59.7	48.1
MGA_759	LOCUS_07560	sequence1:797842..798660(-)	partial			WP_011269113.1	phage tail tape measure protein	68.0	25.7	35.7
MGA_761	LOCUS_07580	sequence1:799854..800795(-)	partial			WP_000774666.1	phage tail tape measure protein	95.2	46.8	60.6
MGA_778	LOCUS_07750	sequence1:812009..812248(-)	partial			WP_198404582.1	Rz1 lytic protein	98.7	72.2	66.7
MGA_787	LOCUS_07840	sequence1:817095..817313(-)	partial			WP_010930566.1	transcriptional repressor LexA	91.7	30.6	63.6
MGA_794	LOCUS_07910	sequence1:820170..821111(-)	partial			WP_000020556.1	DnaT-like ssDNA-binding domain-containing protein	55.9	51.4	54.6
MGA_798	LOCUS_07950	sequence1:822738..823025(+)	partial			WP_000859460.1	LexA family transcriptional regulator	100.0	42.4	85.3
MGA_802	LOCUS_07990	sequence1:825286..825678(+)	partial			WP_000065105.1	ead/Ea22-like family protein	60.8	46.0	43.2
MGA_804	LOCUS_08010	sequence1:825872..826261(+)	partial			WP_013098084.1	DUF551 domain-containing protein	96.9	61.3	34.4
MGA_806	LOCUS_08030	sequence1:826553..827158(+)	partial			WP_001515375.1	exonuclease	97.0	21.0	27.4
MGA_819	LOCUS_08160	sequence1:838122..838598(-)	frameshift		838497,838626,838695,838331,838479	WP_054181051.1	hemagglutinin repeat-containing protein	55.1	2.7	35.6
MGA_820	LOCUS_08170	sequence1:839753..840082(+)	frameshift,internal_stop_codon	839896..839898(+),840082..840084(+)	839931,839741,839686,839861	WP_167691470.1	IS3 family transposase	99.1	30.9	63.2
MGA_821	LOCUS_08180	sequence1:840221..840559(+)	frameshift,internal_stop_codon	840618..840620(+),840558..840560(+),840081..840083(+)	839930	WP_167691470.1	IS3 family transposase	100.0	30.6	78.6
MGA_826	LOCUS_08230	sequence1:843104..843367(-)	partial			WP_224144836.1	hemagglutinin repeat-containing protein	72.4	2.2	49.2
MGA_847	LOCUS_08440	sequence1:871253..871585(+)	partial			WP_000973389.1	host cell division inhibitor Icd-like protein	98.2	58.4	63.9
MGA_858	LOCUS_08550	sequence1:880474..881181(+)	partial			WP_013530922.1	ribonuclease T(2)	74.9	56.4	31.7
MGA_859	LOCUS_08560	sequence1:881821..883290(-)	partial			WP_010947843.1	GGDEF domain-containing protein	67.7	64.1	34.4
MGA_888	LOCUS_08850	sequence1:917728..918045(-)	frameshift,internal_stop_codon	918061..918063(-),917681..917683(-)	917705,917766	WP_159229444.1	IS3 family transposase	87.6	22.4	59.8
MGA_889	LOCUS_08860	sequence1:918213..918383(+)	frameshift,internal_stop_codon	918612..918614(+),918381..918383(+),918603..918605(+)	918659	WP_167691470.1	IS3 family transposase	100.0	15.3	78.6
MGA_902	LOCUS_08990	sequence1:933397..934170(-)	partial			WP_003112752.1	preprotein translocase subunit SecA	11.7	3.3	70.0
MGA_906	LOCUS_09030	sequence1:936162..936689(-)	partial			WP_000127403.1	aldose 1-epimerase family protein	94.3	60.3	25.1
MGA_910	LOCUS_09070	sequence1:941965..943752(+)	partial			WP_011086677.1	arylsulfatase	87.9	68.5	39.3
MGA_913	LOCUS_09100	sequence1:944693..944950(+)	partial			WP_010975215.1	formylglycine-generating enzyme family protein	75.3	21.5	63.1
MGA_915	LOCUS_09120	sequence1:946896..947282(-)	partial			WP_139540890.1	IS66 family transposase	75.8	17.0	79.4
MGA_916	LOCUS_09130	sequence1:947647..948609(-)	partial			WP_013384050.1	ATP-binding protein	78.4	32.1	57.0
MGA_917	LOCUS_09140	sequence1:949453..949728(-)	frameshift		949741	WP_011388107.1	site-specific integrase	100.0	22.6	84.6
MGA_918	LOCUS_09150	sequence1:949721..950644(-)	frameshift		949744	WP_015039727.1	site-specific integrase	97.7	75.0	85.0
MGA_974	LOCUS_09700	sequence1:1012608..1014524(-)	partial			WP_002228169.1	invasin-like inverse autotransporter protein	71.3	15.0	43.3
MGA_1031	LOCUS_10270	sequence1:1080848..1081267(+)	internal_stop_codon	1081265..1081267(+)		WP_011816737.1	formate dehydrogenase subunit alpha	100.0	19.4	81.3
MGA_1032	LOCUS_10280	sequence1:1081316..1082992(+)	internal_stop_codon	1081265..1081267(+)		WP_011816737.1	formate dehydrogenase subunit alpha	99.8	77.9	70.6
MGA_1037	LOCUS_10330	sequence1:1087237..1087887(+)	partial			WP_011817176.1	hydrogenase nickel incorporation protein HypB	96.8	57.1	83.3
MGA_1054	LOCUS_10500	sequence1:1111835..1112368(+)	partial			WP_004266405.1	trimeric autotransporter actin-nucleating factor BimA	99.4	42.4	40.1
MGA_1056	LOCUS_10520	sequence1:1113970..1114851(-)	frameshift		1114993	WP_010989230.1	peptide chain release factor 2	100.0	80.3	92.2
MGA_1099	LOCUS_10950	sequence1:1164992..1165294(+)	frameshift,internal_stop_codon	1165379..1165381(+)	1165432,1165204,1165351	WP_013095441.1	esterase-like activity of phytase family protein	69.0	18.4	54.2
MGA_1120	LOCUS_11160	sequence1:1191444..1191641(-)	frameshift		1191648	WP_001016742.1	hydrogenase expression/formation C-terminal domain-containing protein	78.5	14.4	60.8
MGA_1140	LOCUS_11360	sequence1:1214775..1215473(-)	partial			WP_015367564.1	LacI family DNA-binding transcriptional regulator	39.7	25.8	63.0
MGA_1149	LOCUS_11450	sequence1:1226731..1231035(-)	partial			WP_001034006.1	vacuolating autotransporter toxin Vat	55.3	57.8	61.2
MGA_1155	LOCUS_11510	sequence1:1236961..1237536(-)	internal_stop_codon	1237642..1237644(-)		WP_000783716.1	primase-like DNA-binding domain-containing protein	100.0	24.6	90.6
MGA_1156	LOCUS_11520	sequence1:1237642..1238631(-)	internal_stop_codon	1237642..1237644(-)		WP_000783716.1	primase-like DNA-binding domain-containing protein	100.0	42.3	87.5
MGA_1158	LOCUS_11540	sequence1:1238745..1238954(+)	frameshift		1238718	WP_000214423.1	phage polarity suppression protein	100.0	36.7	87.0
MGA_1161	LOCUS_11570	sequence1:1241232..1241741(-)	frameshift,internal_stop_codon	1241231..1241233(-)	1241839	WP_000772672.1	integrase arm-type DNA-binding domain-containing protein	100.0	40.1	94.7
MGA_1162	LOCUS_11580	sequence1:1241741..1242415(-)	frameshift		1241839	WP_000772672.1	integrase arm-type DNA-binding domain-containing protein	84.8	45.1	96.3
MGA_1225	LOCUS_12210	sequence1:1315881..1320125(-)	partial			WP_000627885.1	intimin type gamma	50.0	76.7	50.3
MGA_1234	LOCUS_12300	sequence1:1328013..1328501(+)	partial			WP_001299599.1	type III secretion system LEE export apparatus protein EscR	100.0	74.2	69.1
MGA_1257	LOCUS_12530	sequence1:1344287..1344838(-)	frameshift		1344899	WP_001273445.1	type III secretion system LEE gatekeeper SepL	100.0	52.1	54.6
MGA_1258	LOCUS_12540	sequence1:1344882..1345316(-)	frameshift		1344899	WP_001273445.1	type III secretion system LEE gatekeeper SepL	98.6	42.2	43.9
MGA_1261	LOCUS_12570	sequence1:1347695..1348330(+)	partial			WP_011117644.1	T3SS effector protein-tyrosine-phosphatase YopH	99.5	41.2	41.0
MGA_1346	LOCUS_13410	sequence1:1429824..1430480(-)	partial			WP_015369410.1	peptidylprolyl isomerase	69.7	77.6	92.8
MGA_1380	LOCUS_13750	sequence1:1465329..1465751(+)	partial			WP_011070830.1	rhodanese-like domain-containing protein	71.4	68.5	61.0
MGA_1391	LOCUS_13860	sequence1:1477702..1478157(+)	frameshift		1477681	WP_011817358.1	DNA utilization protein GntX	100.0	66.5	48.3
MGA_1511	LOCUS_15050	sequence1:1620369..1620572(-)	frameshift,internal_stop_codon	1620560..1620562(-),1620213..1620215(-)	1620116,1620373,1620535,1620216,1620298,1620092	WP_013096391.1	IS5-like element IS903B family transposase	77.6	16.1	69.2
MGA_1512	LOCUS_15060	sequence1:1620560..1621117(-)	frameshift,internal_stop_codon	1620560..1620562(-)	1620298,1620373,1620535	WP_012579081.1	IS5-like element IS903B family transposase	44.3	26.7	72.0
MGA_1514	LOCUS_15080	sequence1:1623992..1624195(+)	frameshift		1623865,1623929	WP_167691470.1	IS3 family transposase	71.6	13.4	75.5
MGA_1515	LOCUS_15090	sequence1:1624164..1624376(-)	internal_stop_codon	1624431..1624433(-)		WP_001349104.1	IS3 family transposase	90.0	20.9	81.0
MGA_1551	LOCUS_15450	sequence1:1658856..1659761(+)	partial			WP_011815277.1	murein hydrolase activator EnvC	99.7	65.9	68.0
MGA_1637	LOCUS_16280	sequence1:1760437..1760841(+)	internal_stop_codon	1760839..1760841(+)		WP_001214973.1	adenine permease AdeP	100.0	27.5	83.6
MGA_1638	LOCUS_16290	sequence1:1760842..1761774(+)	internal_stop_codon	1760839..1760841(+)		WP_002215577.1	NCS2 family permease	99.4	69.7	88.6
MGA_1651	LOCUS_16420	sequence1:1777367..1777717(-)	partial			WP_002209637.1	YceK/YidQ family lipoprotein	71.6	75.0	52.4
MGA_1668	LOCUS_16590	sequence1:1794916..1795368(+)	partial			WP_005459779.1	GNAT family N-acetyltransferase	74.0	77.1	45.9
MGA_1749	LOCUS_17390	sequence1:1886232..1886789(-)	frameshift		1886332,1886863	WP_001232624.1	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	96.2	61.7	62.7
MGA_1750	LOCUS_17400	sequence1:1886744..1887043(-)	frameshift		1886863	WP_000751612.1	SAM-dependent chlorinase/fluorinase	40.4	13.3	82.5
MGA_1769	LOCUS_17590	sequence1:1909912..1910436(+)	partial			WP_011815372.1	Sec-independent protein translocase protein TatB	97.1	72.9	55.3
MGA_1908	LOCUS_18960	sequence1:2085757..2086635(-)	partial			WP_004195077.1	aldose 1-epimerase	89.7	73.9	35.3
MGA_1967	LOCUS_19550	sequence1:2146909..2147553(-)	partial			WP_011815433.1	LysM-like peptidoglycan-binding domain-containing protein	77.1	69.6	43.6
MGA_2015	LOCUS_20030	sequence1:2200280..2200774(-)	partial			WP_002209274.1	GIY-YIG nuclease family protein	48.2	84.2	72.5
MGA_2071	LOCUS_20590	sequence1:2260607..2261623(+)	partial			WP_011815516.1	patatin family protein	91.4	74.1	74.8
MGA_2199	LOCUS_21860	sequence1:2409565..2410302(+)	frameshift		2410266	WP_002218844.1	DASS family sodium-coupled anion symporter	91.0	45.3	64.6
MGA_2200	LOCUS_21870	sequence1:2410275..2411045(+)	frameshift		2410266	WP_002218844.1	DASS family sodium-coupled anion symporter	100.0	52.7	47.5
MGA_2280	LOCUS_22670	sequence1:2504572..2505351(-)	partial			WP_015704545.1	DUF2076 domain-containing protein	73.0	75.3	48.2
MGA_2286	LOCUS_22730	sequence1:2510101..2510634(+)	partial			WP_050298794.1	prepilin peptidase-dependent protein	72.3	63.0	33.1
MGA_2351	LOCUS_23380	sequence1:2589448..2590089(+)	partial			WP_072084141.1	two-component system QseEF-associated lipoprotein QseG	91.5	55.7	46.3
MGA_2361	LOCUS_23480	sequence1:2600433..2602145(-)	partial			WP_011706764.1	pyridoxal-dependent decarboxylase	67.7	70.2	29.7
MGA_2373	LOCUS_23600	sequence1:2615695..2616096(-)	frameshift		2616146	WP_011705000.1	translesion error-prone DNA polymerase V subunit UmuC	100.0	31.7	94.7
MGA_2374	LOCUS_23610	sequence1:2616021..2616953(-)	frameshift		2616149	WP_011705000.1	translesion error-prone DNA polymerase V subunit UmuC	86.5	64.0	97.8
MGA_2376	LOCUS_23630	sequence1:2618898..2620781(+)	partial			WP_041670058.1	RecQ family ATP-dependent DNA helicase	23.9	8.8	32.1
MGA_2377	LOCUS_23640	sequence1:2620783..2623854(+)	partial			WP_011861850.1	helicase-related protein	78.6	72.5	36.6
MGA_2405	LOCUS_23920	sequence1:2648906..2649109(-)	partial			WP_001367084.1	AlpA family phage regulatory protein	88.1	74.7	57.6
MGA_2408	LOCUS_23950	sequence1:2653081..2653272(+)	frameshift		2653254	WP_001130487.1	tyrosine-type recombinase/integrase	92.1	14.8	93.1
MGA_2409	LOCUS_23960	sequence1:2653247..2654239(+)	frameshift		2653254	WP_001130487.1	tyrosine-type recombinase/integrase	98.8	83.0	90.8
MGA_2415	LOCUS_24020	sequence1:2660309..2660641(+)	partial			WP_000973389.1	host cell division inhibitor Icd-like protein	94.5	56.2	69.2
MGA_2418	LOCUS_24050	sequence1:2661197..2661601(+)	partial			WP_017694613.1	primase-like DNA-binding domain-containing protein	97.8	16.5	74.8
MGA_2419	LOCUS_24060	sequence1:2661627..2662046(+)	partial			WP_017694613.1	primase-like DNA-binding domain-containing protein	99.3	17.8	87.7
MGA_2424	LOCUS_24110	sequence1:2665126..2665344(-)	internal_stop_codon	2665399..2665401(-),2665426..2665428(-),2665594..2665596(-)		WP_000071962.1	IS256 family transposase	98.6	24.6	84.5
MGA_2425	LOCUS_24120	sequence1:2665426..2665563(-)	frameshift,internal_stop_codon	2665593..2665595(-),2665398..2665400(-),2665425..2665427(-)	2665610	WP_025246912.1	IS256-like element ISSoEn2 family transposase	95.6	10.7	76.7
MGA_2427	LOCUS_24140	sequence1:2668045..2669847(+)	partial			WP_010933627.1	CRISPR-associated helicase/endonuclease Cas3	98.0	66.9	49.7
MGA_2435	LOCUS_24220	sequence1:2676401..2676535(-)	frameshift,internal_stop_codon	2676684..2676686(-)	2676566	WP_011069273.1	IS3 family transposase	95.5	18.9	83.3
MGA_2436	LOCUS_24230	sequence1:2676684..2676953(-)	frameshift,internal_stop_codon	2676684..2676686(-)	2676566	WP_001302976.1	IS3 family transposase	36.0	10.8	75.0
MGA_2439	LOCUS_24260	sequence1:2679092..2679292(-)	frameshift,internal_stop_codon	2679354..2679356(-),2678924..2678926(-)	2679425,2679031,2679416,2678893,2679167	WP_001118645.1	IS5 family transposase	59.1	12.7	71.8
MGA_2458	LOCUS_24450	sequence1:2695121..2696170(-)	frameshift		2696409,2696393	WP_000627885.1	intimin type gamma	42.1	16.0	34.7
MGA_2459	LOCUS_24460	sequence1:2696362..2698053(-)	frameshift,internal_stop_codon	2696376..2696378(-),2696392..2696394(-)	2696369,2696403,2696421,2696390,2696376,2696412,2696415	WP_002228169.1	invasin-like inverse autotransporter protein	97.2	18.1	37.5
MGA_2464	LOCUS_24510	sequence1:2703490..2704932(+)	partial			WP_011088384.1	glycosyltransferase family 39 protein	58.8	56.6	22.0
MGA_2465	LOCUS_24520	sequence1:2705554..2705796(-)	internal_stop_codon	2705554..2705556(-)		WP_211935309.1	IS3 family transposase	96.2	20.8	83.1
MGA_2474	LOCUS_24610	sequence1:2713561..2714220(-)	partial			WP_224144836.1	hemagglutinin repeat-containing protein	87.2	6.8	58.5
MGA_2475	LOCUS_24620	sequence1:2714575..2715414(-)	partial			WP_015704132.1	hemagglutinin repeat-containing protein	100.0	8.5	63.4
MGA_2476	LOCUS_24630	sequence1:2715951..2717579(-)	partial			WP_002214945.1	contact-dependent inhibition toxin CdiA	100.0	17.0	38.2
MGA_2478	LOCUS_24650	sequence1:2718502..2718825(-)	partial			WP_015704132.1	hemagglutinin repeat-containing protein	79.4	2.7	46.7
MGA_2481	LOCUS_24680	sequence1:2720232..2722466(-)	partial			WP_224144836.1	hemagglutinin repeat-containing protein	97.4	25.1	38.9
MGA_2482	LOCUS_24690	sequence1:2722402..2722764(-)	partial			WP_054181051.1	hemagglutinin repeat-containing protein	90.0	3.4	78.7
MGA_2484	LOCUS_24710	sequence1:2723021..2724820(-)	partial			WP_015704132.1	hemagglutinin repeat-containing protein	98.2	17.8	49.9
MGA_2488	LOCUS_24750	sequence1:2725865..2726467(-)	partial			WP_015704132.1	hemagglutinin repeat-containing protein	62.0	3.7	37.9
MGA_2523	LOCUS_25100	sequence1:2768136..2768735(+)	partial			WP_004536033.1	cytochrome b/b6 domain-containing protein	95.5	50.5	60.7
MGA_2534	LOCUS_25210	sequence1:2775256..2775948(-)	partial			WP_013228302.1	helix-turn-helix domain-containing protein	37.4	27.7	41.9
MGA_2555	LOCUS_25420	sequence1:2791481..2791750(+)	partial			WP_000379425.1	type III secretion system LEE export apparatus protein EscS	65.2	65.2	44.8
MGA_2558	LOCUS_25450	sequence1:2793574..2794227(+)	partial			WP_011074254.1	lytic transglycosylase domain-containing protein	56.7	52.3	50.8
MGA_2591	LOCUS_25780	sequence1:2840150..2840467(-)	frameshift		2840489	WP_000274639.1	AraC family transcriptional regulator	94.3	36.0	65.7
MGA_2595	LOCUS_25820	sequence1:2842448..2842768(-)	partial			WP_015369100.1	N-acetylmuramic acid 6-phosphate etherase	96.2	34.0	68.6
MGA_2598	LOCUS_25850	sequence1:2844582..2845322(+)	partial			WP_001681975.1	hypothetical protein	50.0	29.6	32.0
MGA_2615	LOCUS_26020	sequence1:2858332..2858799(-)	partial			WP_001002057.1	HI1506-related protein	52.9	65.6	51.2
MGA_2627	LOCUS_26140	sequence1:2868140..2868403(-)	partial			WP_071667929.1	hypothetical protein	88.5	74.0	44.2
MGA_2644	LOCUS_26310	sequence1:2877650..2878216(-)	partial			WP_005477459.1	N-acetylmuramic acid 6-phosphate etherase	99.5	62.3	62.0
MGA_2658	LOCUS_26450	sequence1:2891473..2891742(+)	partial			WP_000670998.1	DUF1656 domain-containing protein	74.2	84.6	66.7
MGA_2670	LOCUS_26570	sequence1:2905887..2906087(-)	partial			WP_012303868.1	YfgG family protein	71.2	75.8	51.1
MGA_2697	LOCUS_26840	sequence1:2934904..2935386(-)	partial			WP_010938247.1	hypothetical protein	73.1	78.9	35.9
MGA_2700	LOCUS_26870	sequence1:2937108..2937320(-)	partial			WP_002208656.1	2-dehydropantoate 2-reductase	94.3	21.8	69.7
MGA_2706	LOCUS_26930	sequence1:2942423..2942686(-)	frameshift		2942705,2942532,2942551	WP_100293061.1	recombinase family protein	95.4	39.3	73.5
MGA_2707	LOCUS_26940	sequence1:2942688..2942918(-)	frameshift		2942705,2942532,2942551	WP_100293061.1	recombinase family protein	89.5	32.2	85.3
MGA_2721	LOCUS_27080	sequence1:2958974..2959318(+)	partial			WP_005766760.1	helix-hairpin-helix domain-containing protein	74.6	79.8	50.6
MGA_2737	LOCUS_27240	sequence1:2977248..2977463(-)	partial			WP_000051161.1	pleiotropic regulatory protein RsmS	63.4	81.8	71.1
MGA_2818	LOCUS_28050	sequence1:3068235..3071354(+)	partial			WP_002211638.1	autotransporter adhesin YapH	42.3	12.1	32.0
MGA_2866	LOCUS_28520	sequence1:3124950..3125396(+)	partial			WP_004080120.1	LacI family DNA-binding transcriptional regulator	48.0	21.6	43.1
MGA_2883	LOCUS_28690	sequence1:3148944..3149672(+)	partial			WP_235934756.1	glycosyltransferase family A protein	87.6	62.7	37.2
MGA_2898	LOCUS_28840	sequence1:3167700..3168671(+)	partial			WP_003020707.1	glycosyltransferase	67.2	67.1	35.9
MGA_2903	LOCUS_28890	sequence1:3173537..3174232(+)	partial			WP_000703236.1	glycosyltransferase family 4 protein	99.1	61.5	45.7
MGA_2914	LOCUS_29000	sequence1:3184950..3185945(+)	partial			WP_235934756.1	glycosyltransferase family A protein	69.8	68.2	36.2
MGA_2961	LOCUS_29470	sequence1:3236127..3236504(+)	partial			WP_000726974.1	glycine zipper domain-containing protein	72.8	79.8	39.6
MGA_2966	LOCUS_29520	sequence1:3242062..3242859(-)	partial			WP_011122349.1	potassium channel family protein	43.4	50.9	30.8
MGA_2983	LOCUS_29690	sequence1:3263151..3263636(-)	partial			WP_019079842.1	DUF2057 family protein	75.2	54.6	44.4
MGA_2998	LOCUS_29830	sequence1:3272514..3272804(-)	frameshift,internal_stop_codon	3272514..3272516(-)	3272507,3272396,3272311	WP_001235713.1	recombinase family protein	65.6	34.1	74.6
MGA_3003	LOCUS_29880	sequence1:3277112..3277750(+)	partial			WP_000679210.1	4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase	99.1	48.5	67.6
MGA_3061	LOCUS_30460	sequence1:3343336..3343752(+)	frameshift		3343738,3343946,3343581	WP_011816194.1	DMT family transporter	70.3	34.5	42.3
MGA_3062	LOCUS_30470	sequence1:3343749..3344042(+)	frameshift,internal_stop_codon	3343927..3343929(+)	3343904,3343593,3343747	WP_011704666.1	DMT family transporter	69.1	21.2	50.0
MGA_3063	LOCUS_30480	sequence1:3343966..3344163(+)	frameshift,internal_stop_codon	3343927..3343929(+)	3343904,3343747	WP_011704666.1	DMT family transporter	100.0	23.4	67.7
MGA_3096	LOCUS_30810	sequence1:3380816..3383293(+)	partial			WP_013098386.1	Ig-like domain-containing protein	29.7	6.7	43.5
MGA_3110	LOCUS_30950	sequence1:3400287..3400415(+)	frameshift,internal_stop_codon	3400098..3400100(+)	3400033	WP_000979902.1	N-acetylneuraminate anomerase	97.6	26.5	75.6
MGA_3119	LOCUS_31040	sequence1:3411011..3411223(-)	frameshift,internal_stop_codon	3410863..3410865(-),3411010..3411012(-)	3411234,3410946	WP_167691470.1	IS3 family transposase	100.0	19.4	69.0
MGA_3120	LOCUS_31050	sequence1:3411220..3411363(-)	frameshift,internal_stop_codon	3411010..3411012(-)	3411234,3410949	WP_102800924.1	IS3 family transposase	97.9	12.6	76.1
MGA_3133	LOCUS_31180	sequence1:3423477..3423614(-)	partial			WP_002222515.1	hypothetical protein	97.8	32.4	62.2
MGA_3143	LOCUS_31280	sequence1:3435795..3436313(+)	partial			WP_013096479.1	alpha/beta hydrolase	95.9	66.5	43.7
MGA_3147	LOCUS_31320	sequence1:3440913..3442349(-)	partial			WP_010884006.1	sensor domain-containing diguanylate cyclase	31.0	28.1	33.6
MGA_3194	LOCUS_31790	sequence1:3488715..3489206(-)	partial			WP_005169220.1	septum site-determining protein MinC	96.3	69.7	65.4
MGA_3228	LOCUS_32130	sequence1:3523256..3523579(+)	partial			WP_011816424.1	DUF1496 domain-containing protein	57.0	67.7	46.2
MGA_3246	LOCUS_32310	sequence1:3542679..3543011(-)	frameshift		3543010	WP_011069343.1	HI1450 family dsDNA-mimic protein	99.1	79.3	82.6
MGA_3254	LOCUS_32390	sequence1:3550354..3550944(-)	partial			WP_010965483.1	DUF1919 domain-containing protein	67.3	42.6	26.9
MGA_3261	LOCUS_32460	sequence1:3556885..3557901(-)	frameshift		3557954	WP_000763483.1	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	97.3	62.0	72.9
MGA_3319	LOCUS_33030	sequence1:3614166..3614348(-)	frameshift,internal_stop_codon	3614075..3614077(-)	3614098	WP_086025310.1	IS3-like element ISYpe1 family transposase	71.7	11.7	62.8
MGA_3333	LOCUS_33170	sequence1:3634187..3634417(+)	partial			WP_025246912.1	IS256-like element ISSoEn2 family transposase	97.4	18.4	79.7
MGA_3334	LOCUS_33180	sequence1:3634617..3635831(-)	partial			WP_011263458.1	beta/gamma crystallin-related protein	20.3	46.6	51.2
MGA_3339	LOCUS_33230	sequence1:3638590..3641112(-)	partial			WP_015705727.1	PD-(D/E)XK nuclease-like domain-containing protein	52.1	44.1	50.6
MGA_3346	LOCUS_33300	sequence1:3647848..3648171(+)	partial			WP_000774486.1	DUF1364 domain-containing protein	57.9	65.6	46.0
MGA_3349	LOCUS_33320	sequence1:3650938..3651714(+)	partial			WP_000529253.1	Rha family phage regulatory protein	44.6	42.8	61.7
MGA_3359	LOCUS_33420	sequence1:3657305..3657523(+)	frameshift,internal_stop_codon	3657443..3657445(+)	3657439	WP_001118116.1	hypothetical protein	91.7	26.5	47.0
MGA_3360	LOCUS_33430	sequence1:3657685..3658080(+)	frameshift		3657466	WP_001118118.1	hypothetical protein	77.1	40.8	42.2
MGA_3362	LOCUS_33450	sequence1:3659731..3660456(+)	frameshift		3660336	WP_000787034.1	portal protein	85.5	30.0	61.7
MGA_3363	LOCUS_33460	sequence1:3660345..3661832(+)	frameshift		3660336	WP_000787512.1	portal protein	99.6	70.6	57.9
MGA_3371	LOCUS_33540	sequence1:3667222..3670386(+)	partial			WP_002210389.1	autotransporter YapF	49.5	73.5	22.4
MGA_3374	LOCUS_33570	sequence1:3672037..3672393(+)	partial			WP_004521787.1	YcgJ family protein	78.0	74.8	71.7
MGA_3378	LOCUS_33610	sequence1:3674125..3674415(-)	partial			WP_005462333.1	response regulator	77.1	35.9	44.6
MGA_3379	LOCUS_33620	sequence1:3674473..3674874(-)	frameshift		3674848,3674514,3674403	WP_004667395.1	IS91 family transposase	60.2	19.6	43.2
MGA_3380	LOCUS_33630	sequence1:3674871..3675347(-)	frameshift		3674848	WP_004667395.1	IS91 family transposase	74.1	28.1	44.4
MGA_3382	LOCUS_33650	sequence1:3676786..3677580(-)	partial			WP_226170105.1	sensor histidine kinase	75.0	30.6	50.5
MGA_3384	LOCUS_33670	sequence1:3678519..3678944(+)	frameshift		3678932	WP_005481686.1	polysulfide reductase NrfD	97.2	37.0	48.2
MGA_3385	LOCUS_33680	sequence1:3678950..3679447(+)	frameshift		3679395,3679388,3678935	WP_011707058.1	polysulfide reductase NrfD	84.2	45.1	37.3
MGA_3386	LOCUS_33690	sequence1:3679490..3680011(+)	internal_stop_codon	3680009..3680011(+)		WP_005457967.1	tetrathionate reductase subunit A	90.8	15.2	63.7
MGA_3387	LOCUS_33700	sequence1:3680078..3680560(+)	frameshift,internal_stop_codon	3680009..3680011(+)	3680527	WP_005457967.1	tetrathionate reductase subunit A	93.8	14.7	63.6
MGA_3388	LOCUS_33710	sequence1:3680526..3680771(+)	frameshift		3680527	WP_005457967.1	tetrathionate reductase subunit A	70.4	5.5	63.2
MGA_3395	LOCUS_33780	sequence1:3692011..3694818(+)	partial			WP_011028592.1	cellulose binding domain-containing protein	30.6	57.7	45.1
MGA_3398	LOCUS_33810	sequence1:3698459..3698782(-)	partial			WP_003780110.1	YadA-like family protein	67.3	8.4	46.7
MGA_3446	LOCUS_34290	sequence1:3756420..3758690(-)	partial			WP_011816279.1	electron transport complex subunit RsxC	67.7	72.9	63.9
MGA_3457	LOCUS_34400	sequence1:3768795..3769889(+)	frameshift		3768691,3768547	WP_001099094.1	class II fumarate hydratase	98.6	76.9	73.3
MGA_3477	LOCUS_34600	sequence1:3794680..3795039(-)	partial			WP_000444280.1	effector binding domain-containing protein	84.9	34.5	28.4
MGA_3497	LOCUS_34800	sequence1:3817479..3817730(-)	partial			WP_011102109.1	MmcQ/YjbR family DNA-binding protein	71.1	26.6	45.8
MGA_3507	LOCUS_34900	sequence1:3830683..3830925(-)	partial			WP_002227907.1	DUF333 domain-containing protein	60.0	42.5	50.0
MGA_3555	LOCUS_35380	sequence1:3886044..3886901(-)	partial			WP_010968951.1	EAL domain-containing protein	89.1	33.0	28.6
MGA_3557	LOCUS_35400	sequence1:3889016..3889336(-)	partial			WP_002211085.1	YebG family protein	68.9	68.9	78.1
MGA_3586	LOCUS_35690	sequence1:3919454..3920404(+)	partial			WP_002210974.1	phage shock protein operon transcriptional activator	79.1	73.1	79.2
MGA_3592	LOCUS_35750	sequence1:3926305..3927276(+)	partial			WP_000559878.1	low conductance mechanosensitive channel YnaI	76.2	71.7	37.0
MGA_3607	LOCUS_35900	sequence1:3943238..3943837(-)	partial			WP_000164439.1	penicillin-binding protein activator LpoB	71.4	66.7	60.6
MGA_3610	LOCUS_35930	sequence1:3945809..3946180(-)	partial			WP_019080295.1	cell-envelope stress modulator CpxP	100.0	73.9	42.3
MGA_3616	LOCUS_35990	sequence1:3950618..3951832(+)	partial			WP_003780110.1	YadA-like family protein	35.1	16.7	45.6
MGA_3630	LOCUS_36130	sequence1:3967431..3968042(-)	frameshift		3968067	WP_004526761.1	hypothetical protein	72.4	48.4	32.1
MGA_3632	LOCUS_36150	sequence1:3968487..3969530(-)	partial			WP_004526761.1	hypothetical protein	70.6	82.0	28.8
MGA_3666	LOCUS_36490	sequence1:4007970..4008353(-)	partial			WP_013528057.1	DUF305 domain-containing protein	60.6	59.2	57.1
MGA_3667	LOCUS_36500	sequence1:4008576..4009541(+)	partial			WP_005171314.1	cystathionine beta-synthase	99.7	70.3	71.6
MGA_3672	LOCUS_36550	sequence1:4014731..4016554(+)	partial			WP_011263701.1	UDP-forming cellulose synthase catalytic subunit	93.1	56.4	24.4
MGA_3700	LOCUS_36830	sequence1:4047299..4047748(+)	partial			WP_011036063.1	calcium/calmodulin-dependent protein kinase type II	81.9	73.0	49.6
MGA_3712	LOCUS_36950	sequence1:4060770..4061018(-)	partial			WP_000881535.1	energy-coupling factor ABC transporter ATP-binding protein	85.4	26.9	63.0
MGA_3727	LOCUS_37100	sequence1:4073035..4076040(-)	partial			WP_011090812.1	DUF4011 domain-containing protein	60.9	35.2	41.1
MGA_3728	LOCUS_37110	sequence1:4076073..4078769(-)	partial			WP_011090812.1	DUF4011 domain-containing protein	49.7	24.9	36.7
MGA_3742	LOCUS_37250	sequence1:4098587..4100182(+)	partial			WP_002209166.1	McrB family protein	84.6	66.2	34.9
MGA_3745	LOCUS_37280	sequence1:4103209..4108911(+)	partial			WP_010895613.1	non-ribosomal peptide synthetase	90.1	33.5	29.8
MGA_3748	LOCUS_37310	sequence1:4112513..4113439(-)	partial			WP_005170186.1	YadA C-terminal domain-containing protein	38.3	55.2	34.2
MGA_3758	LOCUS_37410	sequence1:4127047..4127391(-)	partial			WP_002210011.1	M23 family metallopeptidase	62.3	9.6	42.3
MGA_3770	LOCUS_37530	sequence1:4142301..4142828(-)	partial			WP_001000826.1	tail fiber assembly protein	56.6	72.4	40.2
MGA_3771	LOCUS_37540	sequence1:4142831..4143754(-)	partial			WP_001681975.1	hypothetical protein	58.6	38.8	44.7
MGA_3778	LOCUS_37610	sequence1:4149222..4151027(-)	partial			WP_002208853.1	coat protein	60.4	72.8	30.8
MGA_3789	LOCUS_37720	sequence1:4156931..4157800(-)	partial			WP_000123216.1	S49 family peptidase	94.1	63.1	36.1
MGA_3803	LOCUS_37860	sequence1:4168101..4168499(-)	partial			WP_001360050.1	DUF968 domain-containing protein	84.1	33.1	55.9
MGA_3809	LOCUS_37920	sequence1:4171603..4171887(+)	partial			WP_003816743.1	BrnA antitoxin family protein	53.2	54.3	58.0
MGA_3837	LOCUS_38200	sequence1:4191099..4191635(+)	partial			WP_003814023.1	hypothetical protein	47.8	52.0	36.8
MGA_3839	LOCUS_38220	sequence1:4192009..4194744(+)	partial			WP_011816116.1	replication endonuclease	67.0	79.5	37.1
MGA_3846	LOCUS_38290	sequence1:4199855..>4200387(-)	partial			WP_005170186.1	YadA C-terminal domain-containing protein	68.8	53.3	34.1
MGA_3848	LOCUS_38300	sequence2:1140..1304(+)	partial			WP_001351729.1	cysteine hydrolase	100.0	41.5	100.0
MGA_3853	LOCUS_38350	sequence2:4645..5445(-)	partial			WP_001138014.1	Tn3-like element TnAs1 family transposase	100.0	26.9	99.6
MGA_3857	LOCUS_38390	sequence2:8344..9033(+)	partial			WP_012540054.1	arsenite efflux transporter membrane subunit ArsB	95.6	51.0	93.6
MGA_3862	LOCUS_38440	sequence2:11966..12391(+)	partial			WP_012540054.1	arsenite efflux transporter membrane subunit ArsB	100.0	32.9	98.6
MGA_3864	LOCUS_38460	sequence2:12860..13234(-)	partial			WP_013087167.1	arsenical pump-driving ATPase	77.4	16.4	82.3
MGA_3867	LOCUS_38490	sequence2:17053..17382(+)	partial			WP_001067855.1	IS6-like element IS26 family transposase	100.0	46.6	99.1
MGA_3873	LOCUS_38550	sequence2:22386..22562(+)	partial			WP_013087246.1	integrase	55.2	45.1	100.0
MGA_3882	LOCUS_38640	sequence2:33451..34494(+)	partial			WP_000197598.1	thioredoxin family protein	72.0	69.5	31.3
MGA_3909	LOCUS_38910	sequence2:59655..60509(+)	partial			WP_015038859.1	thioredoxin domain-containing protein	62.7	70.0	35.4
MGA_3910	LOCUS_38920	sequence2:60979..61896(+)	partial			WP_000108723.1	DNA-binding protein	68.9	54.4	30.5
MGA_3912	LOCUS_38940	sequence2:62908..64161(+)	partial			WP_011393992.1	ParB/RepB/Spo0J family partition protein	41.7	57.8	36.7
MGA_3916	LOCUS_38980	sequence2:67018..67542(+)	partial			WP_000796228.1	hypothetical protein	64.9	50.7	33.6
MGA_3920	LOCUS_39020	sequence2:70745..73675(+)	partial			WP_004409737.1	MobH family relaxase	31.4	47.2	27.0
MGA_3927	LOCUS_39090	sequence2:78514..79437(+)	partial			WP_000202110.1	type-F conjugative transfer system secretin TraK	81.1	63.7	23.9
MGA_3935	LOCUS_39170	sequence2:91038..91568(+)	partial			WP_012583882.1	signal peptidase I	61.4	52.4	31.8
MGA_3936	LOCUS_39180	sequence2:91531..92799(+)	partial			WP_001255990.1	IncHI-type conjugal transfer protein TrhW	87.9	68.3	28.9
MGA_3937	LOCUS_39190	sequence2:92796..93461(+)	partial			WP_005477084.1	EAL domain-containing protein	92.8	25.2	26.8
MGA_3938	LOCUS_39200	sequence2:93839..94465(+)	partial			WP_011011070.1	IncHI-type conjugal transfer protein TrhU	100.0	63.6	40.4
MGA_3945	LOCUS_39270	sequence2:101966..102979(+)	partial			WP_001302855.1	phage recombination protein Bet	60.5	74.3	51.2
MGA_3954	LOCUS_39360	sequence2:109980..110444(-)	frameshift		110490,110421	WP_000019456.1	IS5-like element ISKpn26 family transposase	98.1	47.2	96.8
MGA_3955	LOCUS_39370	sequence2:110428..110958(-)	frameshift		110490,110421	WP_000019440.1	IS5-like element ISKpn26 family transposase	88.6	47.9	99.4
MGA_3965	LOCUS_39470	sequence2:117541..119250(+)	partial			WP_001113001.1	toprim domain-containing protein	41.7	65.2	31.5
MGA_3970	LOCUS_39520	sequence2:122880..123491(-)	partial			WP_003020323.1	DUF2971 domain-containing protein	73.4	59.1	30.5
MGA_3973	LOCUS_39550	sequence2:126202..127002(-)	partial			WP_001138014.1	Tn3-like element TnAs1 family transposase	100.0	26.9	99.6
