{
    "type": "genome",
    "identifier": "GCF_000264945.2",
    "organism": "Sphingobium indicum B90A",
    "title": "Sphingobium indicum B90A",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Delhi",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000264945.2",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02471717",
        "wgs_master": "na",
        "refseq_category": "na",
        "taxid": "861109",
        "species_taxid": "332055",
        "organism_name": "Sphingobium indicum B90A",
        "infraspecific_name": "strain=B90A",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/12/12",
        "asm_name": "ASM26494v2",
        "asm_submitter": "University of Delhi",
        "gbrs_paired_asm": "GCA_000264945.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/264/945/GCF_000264945.2_ASM26494v2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3945731",
        "genome_size_ungapped": "3945731",
        "gc_percent": "65.000000",
        "replicon_count": "4",
        "scaffold_count": "4",
        "contig_count": "4",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000264945.2-RS_2024_12_22",
        "annotation_date": "2024-12-22",
        "total_gene_count": "3840",
        "protein_coding_gene_count": "3717",
        "non_coding_gene_count": "61",
        "pubmed_id": "22843598"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-12-12",
    "dateModified": "2016-12-12",
    "datePublished": "2016-12-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sphingobium indicum B90A"
        ],
        "sample_taxid": [
            "861109"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "India: Cuttack"
        ],
        "sample_host_location_id": [],
        "data_size": "1.081 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3945731",
        "Number of Sequences": "4",
        "Longest Sequences (bp)": "3654322",
        "N50 (bp)": "3654322",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.0",
        "Number of CDSs": "3767",
        "Average Protein Length": "310.3",
        "Coding Ratio (%)": "88.9",
        "Number of rRNAs": "6",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Sphingobium indicum",
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                "accession": "GCA_000264945.2",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
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                "total_fragments": 1314,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Sphingobium fuliginis",
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                "taxid": 336203,
                "species_taxid": 336203,
                "relation_to_type": "type",
                "validated": true,
                "ani": 91.6962,
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_004152845.1",
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "species_taxid": 46429,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Sphingobium chlorophenolicum",
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                "accession": "GCA_001598515.1",
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                "ani": 89.5017,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobium chungbukense",
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                "accession": "GCA_001005725.1",
                "taxid": 56193,
                "species_taxid": 56193,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobium estronivorans",
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                "accession": "GCA_008692605.1",
                "taxid": 1577690,
                "species_taxid": 1577690,
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                "ani": 86.4789,
                "matched_fragments": 777,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingobium terrigena",
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                "accession": "GCA_003591655.1",
                "taxid": 2304063,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas changnyeongensis",
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                "taxid": 2698679,
                "species_taxid": 2698679,
                "relation_to_type": "type",
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                "ani": 78.7276,
                "matched_fragments": 382,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas cavernae",
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                "accession": "GCA_003590775.1",
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                "species_taxid": 2320861,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4753,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas flavalba",
                "strain": "strain=ZLT-5",
                "accession": "GCA_004796535.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas aracearum",
                "strain": "strain=WZY 27",
                "accession": "GCA_003345355.1",
                "taxid": 2283317,
                "species_taxid": 2283317,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3242,
                "matched_fragments": 376,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCA_000264945.2",
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                "total_fragments": 1314,
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                "accession": "GCF_000412635.1",
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    "_bac2feature": {
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    "_genome_taxon": [
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        "indicum",
        "B90A"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}