{
    "type": "genome",
    "identifier": "GCF_000270665.1",
    "organism": "Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300",
    "title": "Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute for Genome Sciences",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000270665.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN00672674",
        "wgs_master": "AKVF00000000.1",
        "refseq_category": "na",
        "taxid": "1001714",
        "species_taxid": "36809",
        "organism_name": "Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300",
        "infraspecific_name": "strain=CCUG48898",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2012/06/19",
        "asm_name": "ASM27066v1",
        "asm_submitter": "Institute for Genome Sciences",
        "gbrs_paired_asm": "GCA_000270665.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/270/665/GCF_000270665.1_ASM27066v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5195205",
        "genome_size_ungapped": "5195205",
        "gc_percent": "64.000000",
        "replicon_count": "0",
        "scaffold_count": "5",
        "contig_count": "5",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)",
        "annotation_date": "2024-01-28",
        "total_gene_count": "5133",
        "protein_coding_gene_count": "5012",
        "non_coding_gene_count": "55",
        "pubmed_id": "22965080"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2012-06-19",
    "dateModified": "2012-06-19",
    "datePublished": "2012-06-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300"
        ],
        "sample_taxid": [
            "1001714"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.451 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
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        "Number of Sequences": "5",
        "Longest Sequences (bp)": "2849228",
        "N50 (bp)": "2849228",
        "Gap Ratio (%)": "0.000019",
        "GCcontent (%)": "64.1",
        "Number of CDSs": "5086",
        "Average Protein Length": "314.4",
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        "Number of rRNAs": "3",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Mycobacteroides abscessus subsp. massiliense",
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            },
            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            {
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                "species_taxid": 36809,
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                "status": "conclusive"
            },
            {
                "organism_name": "Mycobacteroides abscessus subsp. massiliense",
                "strain": "strain=CIP 108297",
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                "species_taxid": 36809,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "conclusive"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCF_001605725.1",
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            },
            {
                "accession": "GCF_002013895.1",
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                "accession": "GCF_001456355.1",
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            },
            {
                "accession": "GCF_014204435.1",
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            },
            {
                "accession": "GCF_001666835.1",
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        ]
    },
    "_bac2feature": {
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": null,
        "sporulation": null,
        "motility": null,
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        "facultative_respiration": null,
        "anaerobic_respiration": null,
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        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Mycobacteroides",
        "abscessus",
        "subsp.",
        "massiliense",
        "CCUG",
        "48898",
        "=",
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        "15300"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}