# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_8	LOCUS_00080	sequence1:10190..10828(+)	partial			WP_003400291.1	DUF3566 domain-containing protein	100.0	69.7	87.3
MGA_32	LOCUS_00300	sequence1:31592..31819(+)	partial			WP_003400405.1	DUF2694 domain-containing protein	100.0	74.3	93.3
MGA_34	LOCUS_00320	sequence1:32336..33154(+)	internal_stop_codon	32991..32993(+)		WP_003400411.1	DUF5631 domain-containing protein	100.0	74.5	97.1
MGA_44	LOCUS_00420	sequence1:42433..43095(-)	partial			WP_003900793.1	LpqN/LpqT family lipoprotein	100.0	71.0	94.5
MGA_66	LOCUS_00640	sequence1:65009..65236(-)	partial			WP_003899794.1	hypothetical protein	100.0	67.0	88.0
MGA_102	LOCUS_01000	sequence1:102812..103258(-)	partial			WP_003899809.1	zf-HC2 domain-containing protein	100.0	52.5	98.0
MGA_103	LOCUS_01010	sequence1:103707..104660(-)	partial			WP_010886123.1	HNH endonuclease signature motif containing protein	70.7	67.3	94.2
MGA_118	LOCUS_01160	sequence1:131380..132870(+)	partial			WP_003909149.1	PE family protein	26.2	26.2	87.7
MGA_132	LOCUS_01300	sequence1:148675..148857(+)	partial			WP_003400865.1	hypothetical protein	100.0	49.2	98.3
MGA_134	LOCUS_01320	sequence1:149531..150994(+)	partial			WP_010950346.1	PE family protein	24.0	21.7	69.2
MGA_163	LOCUS_01610	sequence1:179317..180456(-)	partial			WP_003401003.1	PE-PPE domain-containing protein	100.0	72.2	96.6
MGA_165	LOCUS_01630	sequence1:180803..181027(-)	frameshift		180805	WP_010950355.1	PE-PPE domain-containing protein	100.0	14.7	45.9
MGA_206	LOCUS_02040	sequence1:223796..224662(+)	partial			WP_003916225.1	L,D-transpeptidase LdtMt4	88.2	69.4	99.2
MGA_284	LOCUS_02820	sequence1:322764..323021(-)	partial			WP_003401383.1	type II toxin-antitoxin system prevent-host-death family antitoxin	100.0	50.3	94.1
MGA_295	LOCUS_02920	sequence1:336560..339073(-)	partial			WP_010886072.1	PE family protein	13.7	13.7	73.0
MGA_314	LOCUS_03110	sequence1:361334..363109(+)	partial			WP_010886074.1	PE family protein	19.6	19.6	70.7
MGA_342	LOCUS_03390	sequence1:392066..392263(+)	internal_stop_codon	392261..392263(+)		WP_003900903.1	class I SAM-dependent methyltransferase	100.0	29.5	100.0
MGA_371	LOCUS_03680	sequence1:424144..424701(-)	frameshift		424816,424801,424792,424804	WP_014000186.1	PPE domain-containing protein	100.0	5.3	95.7
MGA_409	LOCUS_04060	sequence1:472917..473108(+)	frameshift		473090	WP_003898492.1	HNH endonuclease signature motif containing protein	90.5	11.3	68.4
MGA_410	LOCUS_04070	sequence1:473117..474109(+)	partial			WP_003401938.1	HNH endonuclease signature motif containing protein	96.4	72.1	94.3
MGA_421	LOCUS_04180	sequence1:484742..485737(+)	partial			WP_003402078.1	fatty-acid--AMP ligase FAAL30/FadD30	100.0	56.6	100.0
MGA_498	LOCUS_04950	sequence1:567924..568673(-)	partial			WP_003898475.1	DUF2993 domain-containing protein	100.0	71.6	97.6
MGA_555	LOCUS_05520	sequence1:622796..624580(+)	partial			WP_010886079.1	PE family protein	11.3	11.3	80.6
MGA_561	LOCUS_05580	sequence1:630043..631689(+)	frameshift		631836	WP_003911223.1	hypothetical protein	74.5	74.5	85.3
MGA_601	LOCUS_05980	sequence1:671999..675919(-)	partial			WP_010886080.1	PE family protein	9.7	9.7	80.3
MGA_613	LOCUS_06100	sequence1:688035..688862(+)	frameshift		688799	WP_003403107.1	MlaD family protein	92.7	74.3	97.6
MGA_614	LOCUS_06110	sequence1:688811..689065(+)	frameshift		688796	WP_003403107.1	MlaD family protein	100.0	24.5	94.0
MGA_622	LOCUS_06190	sequence1:697023..697196(+)	partial			WP_011727542.1	3'-5' exonuclease	63.2	4.9	86.1
MGA_631	LOCUS_06280	sequence1:702019..702762(+)	partial			WP_083165449.1	IS607 family element RNA-guided endonuclease TnpB	96.0	51.5	88.2
MGA_644	LOCUS_06410	sequence1:711539..712234(+)	frameshift		712195	WP_015287872.1	galactose-1-phosphate uridylyltransferase	80.1	51.4	97.3
MGA_645	LOCUS_06420	sequence1:712252..712722(+)	frameshift		712195	WP_015287872.1	galactose-1-phosphate uridylyltransferase	100.0	43.3	98.7
MGA_685	LOCUS_06820	sequence1:752987..753238(-)	partial			WP_003403365.1	ribonuclease VapC6	100.0	65.4	100.0
MGA_708	LOCUS_07050	sequence1:779546..779809(-)	partial			WP_003403446.1	DUF3060 domain-containing protein	100.0	52.7	100.0
MGA_769	LOCUS_07660	sequence1:832537..832851(+)	partial			WP_144955419.1	ISL3 family transposase	100.0	23.4	87.5
MGA_770	LOCUS_07670	sequence1:832993..833511(+)	partial			WP_003901009.1	PE family protein	62.2	61.1	77.6
MGA_773	LOCUS_07700	sequence1:835062..835208(-)	partial			WP_003403844.1	3-hydroxyisobutyrate dehydrogenase	93.8	15.3	88.9
MGA_774	LOCUS_07710	sequence1:835704..838055(+)	partial			WP_010886084.1	PE family protein	16.1	16.1	67.5
MGA_775	LOCUS_07720	sequence1:838454..840859(+)	frameshift,internal_stop_codon	838528..838530(+)	838536,838451	WP_010886085.1	PE family protein	14.4	14.4	58.3
MGA_783	LOCUS_07800	sequence1:846162..847916(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	56.7	56.7	92.7
MGA_785	LOCUS_07820	sequence1:850345..850515(-)	partial			WP_083125798.1	IS481 family transposase	85.7	12.0	95.8
MGA_811	LOCUS_08080	sequence1:874236..874946(+)	frameshift		874838	WP_003898586.1	S9 family peptidase	87.3	28.7	97.6
MGA_812	LOCUS_08090	sequence1:874858..876393(+)	frameshift		874838	WP_003898586.1	S9 family peptidase	100.0	71.1	98.4
MGA_818	LOCUS_08150	sequence1:881927..882421(+)	partial			WP_010886087.1	hypothetical protein	100.0	51.4	100.0
MGA_828	LOCUS_08250	sequence1:889452..890336(+)	frameshift		889362	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_842	LOCUS_08390	sequence1:904908..905090(-)	partial			WP_003404135.1	DUF3073 domain-containing protein	63.3	63.3	100.0
MGA_862	LOCUS_08590	sequence1:921506..921868(+)	partial			WP_003899524.1	IS607 family element RNA-guided endonuclease TnpB	77.5	20.2	94.6
MGA_865	LOCUS_08620	sequence1:924954..925367(+)	frameshift		925355,925340	WP_014000452.1	PE family protein PE_PGRS12, long form	86.1	12.9	76.3
MGA_866	LOCUS_08630	sequence1:925364..927613(+)	frameshift		925355,926259,925364,926189	WP_010886089.1	hypothetical protein	5.5	5.5	100.0
MGA_867	LOCUS_08640	sequence1:927840..930488(-)	partial			WP_010950451.1	PE family protein	13.8	14.7	75.4
MGA_905	LOCUS_09020	sequence1:968427..970247(-)	frameshift,internal_stop_codon	969749..969751(-),969296..969298(-),970250..970252(-)	970270	WP_010886091.1	PE family protein	19.3	19.3	93.2
MGA_914	LOCUS_09110	sequence1:979081..979368(+)	partial			WP_003404606.1	MarR family transcriptional regulator	100.0	66.4	100.0
MGA_927	LOCUS_09240	sequence1:992601..993140(-)	partial			WP_010886093.1	adenylate/guanylate cyclase domain-containing protein	100.0	62.8	100.0
MGA_937	LOCUS_09340	sequence1:1003808..1003960(+)	partial			WP_003404687.1	hypothetical protein	70.0	70.0	100.0
MGA_958	LOCUS_09550	sequence1:1024404..1024691(+)	partial			WP_003404754.1	DUF1778 domain-containing protein	100.0	60.1	100.0
MGA_987	LOCUS_09840	sequence1:1057650..1057922(-)	partial			WP_003404838.1	chorismate mutase	86.7	74.3	100.0
MGA_996	LOCUS_09930	sequence1:1067745..1068212(+)	partial			WP_003898661.1	phosphoribosylglycinamide formyltransferase	100.0	72.1	89.7
MGA_1018	LOCUS_10150	sequence1:1090377..1093148(+)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	53.0	53.0	65.2
MGA_1033	LOCUS_10300	sequence1:1108176..1108508(-)	partial			WP_003405142.1	zinc ribbon domain-containing protein	62.7	62.7	100.0
MGA_1041	LOCUS_10380	sequence1:1114390..1114710(-)	internal_stop_codon	1114390..1114392(-)		WP_175048406.1	methyltransferase domain-containing protein	62.3	28.8	47.0
MGA_1059	LOCUS_10560	sequence1:1134789..1135250(-)	partial			WP_003898691.1	LpqN/LpqT family lipoprotein	100.0	67.7	99.3
MGA_1079	LOCUS_10760	sequence1:1158922..1159413(-)	frameshift		1159402	WP_057003513.1	ISNCY family transposase	96.9	33.0	81.0
MGA_1080	LOCUS_10770	sequence1:1159379..1160065(-)	frameshift,internal_stop_codon	1160099..1160101(-)	1159405	WP_085251832.1	ISNCY family transposase	98.7	47.0	66.7
MGA_1081	LOCUS_10780	sequence1:1160099..1160437(-)	internal_stop_codon	1160099..1160101(-)		WP_057003513.1	ISNCY family transposase	77.7	18.2	80.5
MGA_1088	LOCUS_10850	sequence1:1164576..1165013(-)	partial			WP_003898701.1	IS5 family transposase	100.0	50.5	99.3
MGA_1114	LOCUS_11110	sequence1:1188426..1190429(-)	partial			WP_010886105.1	PE family protein	22.0	22.0	64.6
MGA_1115	LOCUS_11120	sequence1:1190762..1192162(-)	partial			WP_010886106.1	PE family protein	31.3	31.5	85.6
MGA_1125	LOCUS_11220	sequence1:1203564..1204040(+)	internal_stop_codon	1204141..1204143(+),1204105..1204107(+),1204177..1204179(+),1203294..1203296(+),1203285..1203287(+)		WP_003901991.1	RDD family protein	100.0	65.8	100.0
MGA_1134	LOCUS_11310	sequence1:1211565..1213868(+)	partial			WP_010886107.1	PE family protein	19.8	19.8	67.8
MGA_1135	LOCUS_11320	sequence1:1214054..1214365(+)	partial			WP_163757333.1	isoprenyl transferase	59.2	28.0	60.8
MGA_1139	LOCUS_11360	sequence1:1216474..1219035(+)	frameshift		1216211	WP_010950491.1	PE family protein	14.3	14.4	83.6
MGA_1153	LOCUS_11500	sequence1:1231306..1231995(+)	frameshift		1231893,1232061	WP_211696200.1	carboxylesterase/lipase family protein	84.3	38.4	81.5
MGA_1154	LOCUS_11510	sequence1:1232069..1232467(+)	frameshift		1232298,1231893,1232061	WP_211696200.1	carboxylesterase/lipase family protein	59.8	15.2	91.1
MGA_1155	LOCUS_11520	sequence1:1232421..1232831(+)	frameshift		1232296,1232822	WP_211696200.1	carboxylesterase/lipase family protein	99.3	25.9	84.4
MGA_1188	LOCUS_11850	sequence1:1264611..1264952(+)	frameshift,internal_stop_codon	1264951..1264953(+)	1264593,1265005,1265098,1264956,1265197	WP_011730375.1	crotonase/enoyl-CoA hydratase family protein	98.2	42.0	72.1
MGA_1199	LOCUS_11960	sequence1:1273291..1274772(+)	frameshift		1273255	WP_003405970.1	MMPL family transporter	100.0	63.1	94.5
MGA_1204	LOCUS_12010	sequence1:1278388..1278825(+)	partial			WP_003898701.1	IS5 family transposase	100.0	50.5	99.3
MGA_1213	LOCUS_12100	sequence1:1283061..1284104(-)	partial			WP_003406066.1	hypothetical protein	41.2	38.5	100.0
MGA_1287	LOCUS_12840	sequence1:1372968..1374035(-)	partial			WP_003916796.1	lytic transglycosylase domain-containing protein	86.8	74.9	97.1
MGA_1300	LOCUS_12970	sequence1:1384995..1386683(-)	partial			WP_003910308.1	PE family protein	21.0	21.0	77.1
MGA_1336	LOCUS_13330	sequence1:1426488..1427423(+)	partial			WP_003406584.1	exonuclease SbcCD subunit D	93.6	69.8	99.3
MGA_1350	LOCUS_13470	sequence1:1445223..1445378(+)	partial			WP_003406628.1	hypothetical protein	100.0	49.0	98.0
MGA_1386	LOCUS_13830	sequence1:1488160..1489971(-)	partial			WP_010950524.1	PE family protein	19.6	19.6	90.7
MGA_1431	LOCUS_14280	sequence1:1542000..1542884(-)	frameshift		1542973	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_1449	LOCUS_14460	sequence1:1563955..1564272(+)	partial			WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	86.7
MGA_1457	LOCUS_14540	sequence1:1572133..1573863(-)	partial			WP_010886114.1	PE family protein	20.5	20.5	78.0
MGA_1463	LOCUS_14600	sequence1:1577023..1577538(+)	partial			WP_003898862.1	lysoplasmalogenase	100.0	65.5	96.5
MGA_1475	LOCUS_14710	sequence1:1589205..1589507(+)	frameshift		1589378,1589375	WP_003863093.1	D-TA family PLP-dependent enzyme	53.0	15.5	66.0
MGA_1497	LOCUS_14930	sequence1:1612348..1612947(-)	partial			WP_010886115.1	hypothetical protein	29.1	28.7	87.9
MGA_1504	LOCUS_15000	sequence1:1618215..1619663(-)	partial			WP_010950544.1	PE family protein	23.4	23.0	79.6
MGA_1513	LOCUS_15090	sequence1:1630644..1634633(-)	partial			WP_010886117.1	PE family protein	9.3	9.3	93.5
MGA_1515	LOCUS_15110	sequence1:1636010..1638235(-)	partial			WP_010886118.1	PE family protein	16.7	16.7	100.0
MGA_1531	LOCUS_15270	sequence1:1655615..1656727(-)	partial			WP_003407494.1	PE family protein	37.3	37.3	81.9
MGA_1559	LOCUS_15550	sequence1:1686331..1686579(+)	partial			WP_003900349.1	type II toxin-antitoxin system antitoxin MazE4	73.2	60.0	93.3
MGA_1569	LOCUS_15650	sequence1:1694002..1694442(-)	internal_stop_codon	1694551..1694553(-)		WP_010950550.1	dTDP-4-amino-4,6-dideoxygalactose transaminase	100.0	38.2	98.6
MGA_1570	LOCUS_15660	sequence1:1694551..1695150(-)	internal_stop_codon	1694551..1694553(-)		WP_010950550.1	dTDP-4-amino-4,6-dideoxygalactose transaminase	100.0	52.1	100.0
MGA_1616	LOCUS_16120	sequence1:1753612..1754043(+)	frameshift		1754025	WP_041180066.1	fatty acid--CoA ligase FadD11	97.2	22.9	95.0
MGA_1642	LOCUS_16380	sequence1:1780205..1780660(+)	internal_stop_codon	1780245..1780247(+)		WP_010886122.1	phage protein	88.7	80.7	93.3
MGA_1718	LOCUS_17140	sequence1:1862354..1865389(-)	partial			WP_010886125.1	PE domain-containing protein	48.5	48.5	65.9
MGA_1734	LOCUS_17300	sequence1:1893584..1894294(-)	frameshift		1894163,1894308,1894311	WP_003408257.1	ATP-binding cassette domain-containing protein	100.0	39.9	94.1
MGA_1735	LOCUS_17310	sequence1:1894231..1895349(-)	frameshift		1894145,1894308,1894311	WP_003408257.1	ATP-binding cassette domain-containing protein	93.3	58.7	100.0
MGA_1742	LOCUS_17380	sequence1:1901252..1901758(+)	partial			WP_003408270.1	peroxiredoxin-like family protein	100.0	71.8	99.4
MGA_1820	LOCUS_18160	sequence1:1981348..1981554(+)	frameshift		1981400	WP_013223398.1	Gfo/Idh/MocA family oxidoreductase	73.5	15.3	70.0
MGA_1822	LOCUS_18180	sequence1:1984986..1986221(-)	partial			WP_003408678.1	DUF4185 domain-containing protein	100.0	73.0	92.5
MGA_1824	LOCUS_18200	sequence1:1986861..1987682(-)	partial			WP_003900400.1	phospholipase C	100.0	53.1	96.7
MGA_1825	LOCUS_18210	sequence1:1987752..1988636(-)	frameshift		1988725	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_1828	LOCUS_18240	sequence1:1989840..1992584(-)	partial			WP_010886128.1	PE family protein	13.9	13.9	70.9
MGA_1833	LOCUS_18290	sequence1:1996536..1997420(+)	frameshift		1996446	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_1835	LOCUS_18310	sequence1:1999149..1999364(-)	frameshift,internal_stop_codon	1999146..1999148(-)	1998914,1998965,1999415,1999448,1999370	WP_087902221.1	IS3-like element IS987 family transposase	100.0	17.6	44.0
MGA_1836	LOCUS_18320	sequence1:1999825..2000013(+)	partial			WP_003899012.1	metal-sensitive transcriptional regulator	77.4	53.9	87.5
MGA_1838	LOCUS_18340	sequence1:2000621..2002477(+)	partial			WP_003905649.1	PE family protein	20.9	20.9	82.2
MGA_1860	LOCUS_18560	sequence1:2030354..2030530(+)	internal_stop_codon	2030528..2030530(+)		WP_003405345.1	type VII secretion system ESX-5 protein EsxJ	100.0	59.2	100.0
MGA_1861	LOCUS_18570	sequence1:2030531..2030650(+)	internal_stop_codon	2030528..2030530(+)		WP_003408810.1	type VII secretion system ESX-5 protein EsxJ	100.0	39.8	100.0
MGA_1872	LOCUS_18680	sequence1:2044930..2046882(-)	partial			WP_003910446.1	PE family protein	20.6	21.0	94.0
MGA_1887	LOCUS_18830	sequence1:2061185..2062681(-)	partial			WP_010886133.1	PE family protein	23.7	23.7	72.0
MGA_1945	LOCUS_19400	sequence1:2124837..2125049(-)	partial			WP_003895017.1	(2Fe-2S)-binding protein	72.9	73.9	54.9
MGA_1958	LOCUS_19530	sequence1:2137526..2138086(-)	frameshift		2137528	WP_003409492.1	DUF4389 domain-containing protein	100.0	77.8	90.9
MGA_1960	LOCUS_19550	sequence1:2138668..2139024(-)	frameshift		2138625,2138451,2138670	WP_101528280.1	class I SAM-dependent methyltransferase	100.0	38.2	69.5
MGA_1970	LOCUS_19650	sequence1:2145221..2145736(-)	partial			WP_003905677.1	macro domain-containing protein	100.0	49.9	97.1
MGA_1975	LOCUS_19700	sequence1:2151087..2151392(+)	partial			WP_003409543.1	anti-sigma factor antagonist	100.0	70.6	99.0
MGA_1987	LOCUS_19820	sequence1:2161459..2162769(+)	frameshift		2161351	WP_003409584.1	isocitrate lyase ICL2	100.0	56.9	98.2
MGA_2002	LOCUS_19970	sequence1:2181269..2181646(-)	partial			WP_003409689.1	TIGR03085 family metal-binding protein	100.0	58.4	100.0
MGA_2004	LOCUS_19990	sequence1:2182467..2182697(-)	partial			WP_003899087.1	helix-turn-helix domain-containing protein	100.0	29.3	100.0
MGA_2005	LOCUS_20000	sequence1:2182694..2182972(-)	frameshift		2182738,2183063	WP_011727413.1	GlxA family transcriptional regulator	85.9	23.6	87.3
MGA_2023	LOCUS_20180	sequence1:2199082..2199585(-)	partial			WP_003409874.1	hypothetical protein	100.0	55.7	91.0
MGA_2036	LOCUS_20310	sequence1:2204372..2204713(+)	partial			WP_003899099.1	hypothetical protein	100.0	68.9	91.2
MGA_2060	LOCUS_20550	sequence1:2226252..2227928(+)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	53.9	53.9	97.0
MGA_2085	LOCUS_20800	sequence1:2249268..2249465(-)	partial			WP_005629687.1	phosphoenolpyruvate synthase	86.2	7.3	66.1
MGA_2095	LOCUS_20900	sequence1:2260673..2261152(+)	partial			WP_003410086.1	IS110 family transposase	90.6	69.9	99.3
MGA_2104	LOCUS_20990	sequence1:2267127..2267543(-)	partial			WP_003900449.1	type II toxin-antitoxin system RelE/ParE family toxin	100.0	68.7	99.3
MGA_2131	LOCUS_21260	sequence1:2294539..2301090(-)	partial			WP_010886138.1	type I polyketide synthase	100.0	52.6	96.9
MGA_2150	LOCUS_21450	sequence1:2320920..2321072(+)	partial			WP_003410651.1	type II toxin-antitoxin system antitoxin MazE7	100.0	64.9	100.0
MGA_2171	LOCUS_21660	sequence1:2337930..2338196(+)	partial			WP_010950655.1	DUF5631 domain-containing protein	61.4	7.5	90.7
MGA_2174	LOCUS_21690	sequence1:2339656..2340882(+)	frameshift		2340189,2340183	WP_003911763.1	DUF5631 domain-containing protein	100.0	56.6	78.9
MGA_2189	LOCUS_21840	sequence1:2356737..2357909(-)	frameshift		2358037	WP_003410786.1	PE family protein	55.6	44.0	34.6
MGA_2197	LOCUS_21920	sequence1:2365850..2366734(+)	frameshift		2365760	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_2218	LOCUS_22130	sequence1:2387210..2387980(-)	partial			WP_003411064.1	hypothetical protein	10.9	10.9	100.0
MGA_2219	LOCUS_22140	sequence1:2387977..2388183(-)	frameshift		2388297,2387987,2388204	WP_010886147.1	PE family protein	92.6	3.8	46.0
MGA_2231	LOCUS_22260	sequence1:2396910..2397218(-)	partial			WP_003411107.1	hypothetical protein	81.4	60.6	100.0
MGA_2240	LOCUS_22350	sequence1:2403429..2404043(+)	partial			WP_003411129.1	phosphoribosyltransferase family protein	100.0	58.0	96.1
MGA_2245	LOCUS_22400	sequence1:2406848..2407396(-)	partial			WP_003411137.1	YggS family pyridoxal phosphate-dependent enzyme	98.4	69.4	100.0
MGA_2257	LOCUS_22520	sequence1:2421670..2422011(-)	frameshift		2421980	WP_003411199.1	TetR/AcrR family transcriptional regulator	85.8	47.1	94.8
MGA_2259	LOCUS_22540	sequence1:2423248..2424846(-)	partial			WP_009939865.1	PE family protein	21.8	21.8	85.3
MGA_2264	LOCUS_22590	sequence1:2430167..2431051(-)	frameshift		2431140	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_2297	LOCUS_22920	sequence1:2462156..2463055(-)	partial			WP_003411405.1	MmpS family transport accessory protein	48.5	48.5	85.5
MGA_2327	LOCUS_23220	sequence1:2500931..2501158(+)	frameshift		2501155	WP_003411499.1	2OG-Fe(II) oxygenase	100.0	31.8	100.0
MGA_2328	LOCUS_23230	sequence1:2501155..2501640(+)	partial			WP_003899225.1	2OG-Fe(II) oxygenase	100.0	69.1	99.4
MGA_2340	LOCUS_23350	sequence1:2510359..2510484(-)	partial			WP_003899229.1	hypothetical protein	100.0	52.6	100.0
MGA_2364	LOCUS_23590	sequence1:2534052..2534483(-)	frameshift		2534575	WP_003901363.1	apolipoprotein N-acyltransferase	100.0	28.5	99.3
MGA_2365	LOCUS_23600	sequence1:2534480..2535652(-)	frameshift		2534575	WP_003901363.1	apolipoprotein N-acyltransferase	84.4	65.5	92.7
MGA_2380	LOCUS_23750	sequence1:2550452..2551336(+)	frameshift		2550362	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_2390	LOCUS_23850	sequence1:2562891..2563124(+)	partial			WP_003900493.1	lipoprotein LpqH	100.0	45.0	98.7
MGA_2402	LOCUS_23970	sequence1:2573823..2574065(+)	partial			WP_003411866.1	DUF1918 domain-containing protein	73.8	73.8	96.6
MGA_2407	LOCUS_24020	sequence1:2577507..2577932(+)	frameshift		2577399	WP_211695697.1	TVP38/TMEM64 family protein	60.3	36.2	82.4
MGA_2458	LOCUS_24530	sequence1:2636015..2636899(+)	frameshift		2635925	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_2473	LOCUS_24680	sequence1:2651763..2651948(+)	partial			WP_010886067.1	PE family protein	91.8	11.3	66.1
MGA_2500	LOCUS_24950	sequence1:2692809..2693894(+)	partial			WP_003908846.1	PE family protein	42.7	42.7	72.7
MGA_2532	LOCUS_25270	sequence1:2725605..2725838(-)	frameshift,internal_stop_codon	2725875..2725877(-)	2725696,2725931,2725829	WP_010908684.1	hydrogen peroxide-inducible genes activator	61.0	15.1	72.3
MGA_2576	LOCUS_25710	sequence1:2775830..2776294(+)	partial			WP_003412695.1	hypothetical protein	96.1	62.2	98.0
MGA_2582	LOCUS_25770	sequence1:2784667..2785551(-)	frameshift		2785640	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_2589	LOCUS_25840	sequence1:2795311..2797395(-)	partial			WP_003910913.1	PE family protein	18.3	18.3	89.0
MGA_2591	LOCUS_25860	sequence1:2801264..2806246(-)	partial			WP_010886147.1	PE family protein	7.2	7.2	96.7
MGA_2616	LOCUS_26110	sequence1:2830887..2831105(-)	partial			WP_003899362.1	DUF4411 family protein	100.0	47.1	98.6
MGA_2633	LOCUS_26280	sequence1:2853326..2854276(+)	partial			WP_003412968.1	ERCC4 domain-containing protein	100.0	68.3	98.7
MGA_2668	LOCUS_26630	sequence1:2881419..2881712(+)	frameshift		2881607	WP_010950737.1	DUF2652 domain-containing protein	67.0	26.5	100.0
MGA_2669	LOCUS_26640	sequence1:2881651..2882157(+)	frameshift		2881607	WP_010950737.1	DUF2652 domain-containing protein	100.0	68.6	99.4
MGA_2698	LOCUS_26930	sequence1:2921561..2923192(+)	partial			WP_010950748.1	PE family protein	27.8	27.7	82.1
MGA_2706	LOCUS_27010	sequence1:2927194..2927490(+)	partial			WP_003413444.1	DUF2617 family protein	100.0	59.8	99.0
MGA_2708	LOCUS_27030	sequence1:2928000..2928401(+)	internal_stop_codon	2927949..2927951(+)		WP_003413451.1	DUF350 domain-containing protein	88.0	77.0	95.7
MGA_2724	LOCUS_27190	sequence1:2943610..2944995(-)	partial			WP_010886099.1	PE domain-containing protein	25.8	36.0	89.9
MGA_2737	LOCUS_27320	sequence1:2955176..2955430(+)	partial			WP_003899403.1	hypothetical protein	100.0	70.0	100.0
MGA_2739	LOCUS_27340	sequence1:2957050..2957442(+)	partial			WP_003413614.1	archease	100.0	72.6	90.0
MGA_2744	LOCUS_27390	sequence1:2960115..2962451(-)	partial			WP_009938544.1	PE family protein	15.2	15.2	86.4
MGA_2754	LOCUS_27490	sequence1:2968534..2968842(+)	partial			WP_011729843.1	antitoxin MazE family protein	55.9	82.6	78.9
MGA_2759	LOCUS_27540	sequence1:2972547..2973431(+)	frameshift		2972457	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_2774	LOCUS_27690	sequence1:2983081..2983884(+)	partial			WP_003904572.1	IS256-like element IS1081 family transposase	97.8	62.9	100.0
MGA_2805	LOCUS_28000	sequence1:3013693..3013989(-)	partial			WP_003413930.1	dUTP diphosphatase	81.6	51.9	91.2
MGA_2828	LOCUS_28230	sequence1:3031050..3031340(-)	partial			WP_003899446.1	LysM peptidoglycan-binding domain-containing protein	100.0	58.2	93.8
MGA_2849	LOCUS_28440	sequence1:3053924..3055501(+)	partial			WP_010886154.1	PE family protein	24.0	24.0	87.3
MGA_2850	LOCUS_28450	sequence1:3055816..3056025(+)	partial			WP_003414015.1	epoxide hydrolase	95.7	48.3	40.3
MGA_2886	LOCUS_28810	sequence1:3086225..3086620(-)	partial			WP_003899476.1	Lrp/AsnC family transcriptional regulator	100.0	73.2	100.0
MGA_2912	LOCUS_29070	sequence1:3112475..3112666(-)	partial			WP_003899487.1	hypothetical protein	100.0	30.1	98.4
MGA_2918	LOCUS_29130	sequence1:3115751..3115918(-)	partial			WP_011014093.1	ISL3-like element IS31831 family transposase	100.0	12.6	63.6
MGA_2919	LOCUS_29140	sequence1:3116344..3116757(+)	partial			WP_003414195.1	hypothetical protein	100.0	67.8	89.1
MGA_2922	LOCUS_29170	sequence1:3120576..3121460(-)	frameshift		3121549	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_2949	LOCUS_29430	sequence1:3145181..3147883(-)	partial			WP_003899505.1	translation initiation factor IF-2	69.9	69.9	98.3
MGA_2963	LOCUS_29570	sequence1:3162278..3164125(+)	partial			WP_010886155.1	PE family protein	20.7	20.7	92.9
MGA_2967	LOCUS_29610	sequence1:3167878..3168210(+)	frameshift		3168177,3168211	WP_011728271.1	hydrogenase nickel incorporation protein HypB	92.7	40.2	63.5
MGA_2987	LOCUS_29810	sequence1:3184673..3184864(+)	frameshift		3184921,3184837	WP_003403244.1	type II toxin-antitoxin system Phd/YefM family antitoxin	66.7	48.8	71.4
MGA_2993	LOCUS_29870	sequence1:3189593..3190180(-)	frameshift		3190160	WP_003414658.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	96.4	51.6	100.0
MGA_2999	LOCUS_29930	sequence1:3195555..3196142(-)	partial			WP_003899526.1	IS607 family transposase	87.2	57.6	95.3
MGA_3043	LOCUS_30370	sequence1:3244259..3245458(+)	partial			WP_003900597.1	long-chain-fatty-acid--AMP ligase FAAL26/FadD26	100.0	68.4	99.7
MGA_3058	LOCUS_30520	sequence1:3290133..3290516(+)	partial			WP_003414867.1	ATP-binding protein	100.0	53.4	99.2
MGA_3091	LOCUS_30850	sequence1:3331368..3331622(-)	frameshift		3331376	WP_003902383.1	DAK2 domain-containing protein	78.6	11.9	100.0
MGA_3103	LOCUS_30970	sequence1:3343186..3343830(-)	partial			WP_003415107.1	DNA-binding protein HupB	46.7	46.7	98.0
MGA_3245	LOCUS_32390	sequence1:3488734..3489060(+)	partial			WP_003901547.1	hypothetical protein	100.0	65.9	95.4
MGA_3284	LOCUS_32780	sequence1:3527388..3529319(-)	partial			WP_003906993.1	PPE family protein	41.7	45.4	82.5
MGA_3297	LOCUS_32910	sequence1:3540985..3541164(-)	frameshift		3541148	WP_010948162.1	hypothetical protein	89.8	41.7	50.9
MGA_3307	LOCUS_33010	sequence1:3549688..3549936(-)	partial			WP_003899953.1	type II toxin-antitoxin system Phd/YefM family antitoxin	100.0	54.7	84.1
MGA_3311	LOCUS_33050	sequence1:3551655..3552539(+)	frameshift		3551565	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_3313	LOCUS_33070	sequence1:3553138..3554022(+)	frameshift		3553048	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_3327	LOCUS_33210	sequence1:3566052..3566684(+)	partial			WP_003416809.1	hypothetical protein	100.0	70.2	97.1
MGA_3343	LOCUS_33370	sequence1:3585673..3585966(-)	partial			WP_003416863.1	DUF3107 domain-containing protein	63.9	68.9	98.4
MGA_3344	LOCUS_33380	sequence1:3586429..3586830(+)	partial			WP_003416868.1	MmpS family transport accessory protein	71.4	51.1	100.0
MGA_3351	LOCUS_33450	sequence1:3593517..3593849(+)	frameshift		3593434	WP_015288476.1	GNAT family N-acetyltransferase	100.0	68.8	94.5
MGA_3370	LOCUS_33640	sequence1:3609778..3610380(-)	frameshift		3610388	WP_003416930.1	wax ester/triacylglycerol synthase family O-acyltransferase	100.0	42.6	99.5
MGA_3379	LOCUS_33730	sequence1:3621567..3622067(-)	partial			WP_003416963.1	ComF family protein	88.0	68.5	97.3
MGA_3467	LOCUS_34610	sequence1:3710981..3711865(+)	frameshift		3710891	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_3479	LOCUS_34730	sequence1:3724087..3724719(+)	frameshift		3724075	WP_044081650.1	alpha/beta hydrolase	100.0	76.9	99.5
MGA_3511	LOCUS_35040	sequence1:3778712..3780514(+)	partial			WP_010886167.1	PE family protein	24.8	25.3	81.9
MGA_3518	LOCUS_35110	sequence1:3788551..3788796(+)	internal_stop_codon	3788545..3788547(+)		WP_198408425.1	enoyl-CoA hydratase/isomerase family protein	100.0	30.1	96.3
MGA_3525	LOCUS_35180	sequence1:3795280..3796164(-)	frameshift		3796253	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_3528	LOCUS_35210	sequence1:3797617..3798390(-)	partial			WP_009935184.1	polyprenyl synthetase family protein	100.0	73.4	95.7
MGA_3533	LOCUS_35260	sequence1:3801833..3804028(+)	partial			WP_010886168.1	PE family protein	20.0	20.0	82.9
MGA_3580	LOCUS_35730	sequence1:3849474..3850319(-)	partial			WP_085095815.1	IS256 family transposase	98.9	67.6	90.6
MGA_3604	LOCUS_35970	sequence1:3874583..3874915(+)	frameshift		3874903	WP_010950891.1	allantoin permease	97.3	19.1	100.0
MGA_3605	LOCUS_35980	sequence1:3874938..3876269(+)	frameshift		3874903	WP_010950891.1	allantoin permease	98.4	77.7	98.4
MGA_3616	LOCUS_36090	sequence1:3884143..3885096(+)	partial			WP_010886123.1	HNH endonuclease signature motif containing protein	70.7	67.3	94.2
MGA_3624	LOCUS_36170	sequence1:3891386..3892270(+)	frameshift		3891296	WP_087902221.1	IS3-like element IS987 family transposase	95.6	66.9	99.6
MGA_3656	LOCUS_36490	sequence1:3926748..3930893(+)	partial			WP_010950904.1	PE family protein	10.0	10.1	68.1
MGA_3657	LOCUS_36500	sequence1:3931184..3936889(+)	frameshift,internal_stop_codon	3936888..3936890(+)	3934304,3934003,3936899	WP_010886175.1	PE family protein	6.1	7.8	86.2
MGA_3660	LOCUS_36530	sequence1:3939796..3941940(+)	frameshift,internal_stop_codon	3939834..3939836(+),3940813..3940815(+),3940243..3940245(+),3939907..3939909(+)	3941895,3941898,3941904,3939824,3939827,3939833,3942076,3940701,3940734	WP_010886173.1	PE family protein	16.2	16.2	93.1
MGA_3675	LOCUS_36670	sequence1:3961231..3961965(+)	partial			WP_003419207.1	NHL repeat-containing protein	100.0	71.1	97.5
MGA_3743	LOCUS_37350	sequence1:4031583..4033337(-)	partial			WP_010886177.1	PE family protein	21.2	21.2	85.5
MGA_3748	LOCUS_37400	sequence1:4036910..4038229(-)	partial			WP_003911027.1	PE family protein	27.6	27.6	89.3
MGA_3786	LOCUS_37780	sequence1:4075931..4076278(+)	frameshift		4076260	WP_014001845.1	IS21 family transposase	95.7	26.8	99.1
MGA_3787	LOCUS_37790	sequence1:4076663..4077163(+)	frameshift		4076603	WP_014001845.1	IS21 family transposase	100.0	40.4	98.8
MGA_3803	LOCUS_37950	sequence1:4093978..4094706(+)	frameshift		4093969	WP_099318959.1	PE family protein	30.6	16.2	58.1
MGA_3805	LOCUS_37970	sequence1:4095179..4095478(-)	frameshift		4095181	WP_010886180.1	apoptosis inhibitor	100.0	79.2	86.9
MGA_3841	LOCUS_38330	sequence1:4130535..4131890(+)	partial			WP_003899640.1	hypothetical protein	74.1	74.1	84.4
MGA_3859	LOCUS_38510	sequence1:4149269..4149538(-)	partial			WP_003419814.1	hypothetical protein	47.2	32.6	85.7
MGA_3860	LOCUS_38520	sequence1:4149769..4150089(-)	partial			WP_003419816.1	hypothetical protein	69.8	69.8	78.4
MGA_3870	LOCUS_38620	sequence1:4160690..4161091(-)	partial			WP_003420408.1	YbaB/EbfC family nucleoid-associated protein	69.9	69.9	81.7
MGA_3878	LOCUS_38700	sequence1:4169784..4170347(+)	frameshift		4169845	WP_003420425.1	cutinase family protein	88.8	71.2	93.4
MGA_3879	LOCUS_38710	sequence1:4171159..4171392(+)	frameshift		4171141	WP_041180327.1	SDR family NAD(P)-dependent oxidoreductase	100.0	23.5	98.7
MGA_3894	LOCUS_38860	sequence1:4190462..4190695(-)	internal_stop_codon	4190462..4190464(-)		WP_010950814.1	PPE family protein	100.0	17.7	75.3
MGA_3904	LOCUS_38960	sequence1:4197806..4198129(-)	partial			WP_003899673.1	hypothetical protein	100.0	63.3	97.2
MGA_3927	LOCUS_39190	sequence1:4216059..4216241(-)	frameshift,internal_stop_codon	4216255..4216257(-)	4216096,4216251,4216220,4216446	WP_163760282.1	DDE-type integrase/transposase/recombinase	68.3	8.8	82.9
MGA_3928	LOCUS_39200	sequence1:4216256..4216447(-)	frameshift		4216096,4216266,4216220,4216446	WP_144956692.1	DDE-type integrase/transposase/recombinase	100.0	13.5	90.5
MGA_3986	LOCUS_39780	sequence1:4300533..4301744(+)	partial			WP_003899713.1	long-chain-fatty-acid--CoA ligase FadD23	100.0	69.0	99.0
MGA_4003	LOCUS_39950	sequence1:4315746..4316300(-)	partial			WP_003899726.1	DUF4328 domain-containing protein	100.0	53.8	91.8
MGA_4023	LOCUS_40150	sequence1:4337252..4338127(+)	partial			WP_003399818.1	MinD/ParA family protein	100.0	74.6	99.0
MGA_4025	LOCUS_40170	sequence1:4339336..4340205(+)	partial			WP_003899735.1	FHA domain-containing protein	100.0	73.7	88.6
MGA_4039	LOCUS_40310	sequence1:4354310..4355188(+)	frameshift,internal_stop_codon	4354263..4354265(+),4354272..4354274(+),4354236..4354238(+)	4354171,4354020,4354286	WP_003909105.1	type VII secretion system ESX-1 associated protein EspI	100.0	43.8	91.4
MGA_4042	LOCUS_40340	sequence1:4357771..4359960(-)	frameshift,internal_stop_codon	4357965..4357967(-),4359919..4359921(-),4359793..4359795(-),4360018..4360020(-)	4359969,4359813,4360198	WP_010886183.1	type VII secretion system ESX-1 associated protein EspK	56.7	56.7	81.1
MGA_4049	LOCUS_40410	sequence1:4368696..4370348(-)	partial			WP_003400012.1	type VII secretion system ESX-2 serine protease mycosin MycP2	63.6	63.6	97.4
MGA_4065	LOCUS_40570	sequence1:4386543..4386896(-)	partial			WP_010950962.1	hypothetical protein	91.5	71.8	75.7