# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_6	LOCUS_00060	sequence1:5830..6123(-)	partial			WP_110754436.1	type II toxin-antitoxin system PemK/MazF family toxin	72.2	65.4	38.6
MGA_15	LOCUS_00150	sequence1:13960..14202(+)	partial			WP_010886190.1	palindromic element RPE3 domain-containing protein	97.5	21.8	84.6
MGA_16	LOCUS_00160	sequence1:14283..14570(+)	frameshift		14552,14193,14567	WP_010886190.1	palindromic element RPE3 domain-containing protein	94.7	25.2	92.2
MGA_17	LOCUS_00170	sequence1:14545..14880(+)	frameshift		14552,14567	WP_010886190.1	palindromic element RPE3 domain-containing protein	90.1	28.0	92.0
MGA_22	LOCUS_00220	sequence1:18384..19196(-)	frameshift		19155	WP_063921625.1	ComEC/Rec2 family competence protein	71.9	25.6	31.3
MGA_23	LOCUS_00230	sequence1:20165..26092(+)	partial			WP_011190491.1	autotransporter outer membrane beta-barrel domain-containing protein	24.7	40.0	68.1
MGA_44	LOCUS_00440	sequence1:37950..38138(-)	frameshift		38239	WP_010883395.1	dihydropteroate synthase	80.6	11.1	50.0
MGA_46	LOCUS_00460	sequence1:38613..39242(-)	frameshift		38459,38621	WP_010883395.1	dihydropteroate synthase	98.6	46.9	38.2
MGA_59	LOCUS_00590	sequence1:47557..48024(+)	frameshift		47994	WP_011190491.1	autotransporter outer membrane beta-barrel domain-containing protein	75.5	10.2	38.5
MGA_60	LOCUS_00600	sequence1:48012..48491(+)	frameshift		47994	WP_147141400.1	autotransporter domain-containing protein	86.2	8.7	30.3
MGA_65	LOCUS_00650	sequence1:51659..51961(-)	partial			WP_004596650.1	SDR family oxidoreductase	87.0	36.1	82.8
MGA_72	LOCUS_00720	sequence1:60042..60428(-)	partial			WP_010911896.1	phosphate regulon transcriptional regulator PhoB	97.7	55.5	33.1
MGA_76	LOCUS_00760	sequence1:62370..63977(+)	partial			WP_004596638.1	tRNA lysidine(34) synthetase TilS	41.5	51.6	85.1
MGA_78	LOCUS_00780	sequence1:66014..66289(+)	frameshift		66460,66271	WP_010951379.1	DNA cytosine methyltransferase	93.4	27.0	56.5
MGA_79	LOCUS_00790	sequence1:66277..66504(+)	frameshift		66265,66460	WP_002222381.1	DNA (cytosine-5-)-methyltransferase	98.7	21.7	31.1
MGA_90	LOCUS_00900	sequence1:75881..76132(+)	frameshift,internal_stop_codon	76310..76312(+),76130..76132(+)	76261	WP_000109982.1	class I SAM-dependent methyltransferase	83.1	35.9	44.9
MGA_127	LOCUS_01270	sequence1:110605..110871(+)	partial			WP_004080883.1	queuosine precursor transporter	87.5	35.4	39.0
MGA_128	LOCUS_01280	sequence1:110917..116385(-)	partial			WP_147141400.1	autotransporter domain-containing protein	21.0	23.5	81.7
MGA_143	LOCUS_01430	sequence1:129058..129336(+)	frameshift,internal_stop_codon	128846..128848(+)	128872	WP_002552145.1	ribose-phosphate pyrophosphokinase	100.0	28.1	40.2
MGA_162	LOCUS_01620	sequence1:156614..156910(+)	frameshift,internal_stop_codon	156909..156911(+),156459..156461(+)	156539,157022	WP_004597143.1	acetate/propionate family kinase	100.0	25.5	81.6
MGA_163	LOCUS_01630	sequence1:157089..157442(+)	frameshift,internal_stop_codon	156908..156910(+),157440..157442(+)	157021	WP_004597143.1	acetate/propionate family kinase	100.0	30.4	83.8
MGA_186	LOCUS_01860	sequence1:177442..177669(+)	frameshift		177322	WP_004597174.1	30S ribosomal protein S12	100.0	58.1	96.0
MGA_197	LOCUS_01970	sequence1:193910..195085(-)	partial			WP_103897643.1	DUF1674 domain-containing protein	12.3	51.6	85.4
MGA_234	LOCUS_02340	sequence1:232058..232207(-)	frameshift,internal_stop_codon	232297..232299(-),232228..232230(-)	232344,232402,232068	WP_004595908.1	prolyl oligopeptidase family protein	98.0	6.6	75.0
MGA_235	LOCUS_02350	sequence1:232394..232690(-)	frameshift,internal_stop_codon	232907..232909(-),232297..232299(-),232228..232230(-)	232402,232347	WP_004595908.1	prolyl oligopeptidase family protein	100.0	13.6	88.8
MGA_236	LOCUS_02360	sequence1:232907..233128(-)	frameshift,internal_stop_codon	232906..232908(-),233281..233283(-)	233226	WP_004595908.1	prolyl oligopeptidase family protein	97.3	10.0	69.4
MGA_237	LOCUS_02370	sequence1:233500..233685(-)	frameshift,internal_stop_codon	233280..233282(-),233731..233733(-)	233442,233228,233526	WP_004595908.1	prolyl oligopeptidase family protein	86.9	7.3	88.7
MGA_238	LOCUS_02380	sequence1:233731..234087(-)	frameshift,internal_stop_codon	233731..233733(-)	233526	WP_004595908.1	prolyl oligopeptidase family protein	100.0	16.8	71.9
MGA_265	LOCUS_02650	sequence1:258982..259431(-)	frameshift		259002	WP_004595951.1	zinc-ribbon domain-containing protein	95.3	67.1	81.7
MGA_278	LOCUS_02780	sequence1:268924..269358(+)	frameshift,internal_stop_codon	269356..269358(+)	268922	WP_011190491.1	autotransporter outer membrane beta-barrel domain-containing protein	97.9	12.8	37.4
MGA_320	LOCUS_03200	sequence1:310756..311205(+)	frameshift		310650,310743	WP_010947342.1	ABC transporter ATP-binding protein	99.3	26.3	57.0
MGA_324	LOCUS_03240	sequence1:312845..313732(-)	frameshift,internal_stop_codon	313775..313777(-)	313396,312852,313318	WP_004598572.1	hypothetical protein	100.0	74.1	65.4
MGA_337	LOCUS_03370	sequence1:327704..327892(+)	frameshift		327886,327967	WP_038966371.1	M15 family metallopeptidase	93.5	22.6	50.0
MGA_387	LOCUS_03870	sequence1:372069..372356(-)	frameshift		372360	WP_010946960.1	PDDEXK nuclease domain-containing protein	91.6	24.6	49.4
MGA_388	LOCUS_03880	sequence1:372340..372663(-)	frameshift,internal_stop_codon	372766..372768(-)	372357	WP_014498593.1	PDDEXK nuclease domain-containing protein	96.3	23.0	51.5
MGA_389	LOCUS_03890	sequence1:372766..373089(-)	internal_stop_codon	372766..372768(-)		WP_011143046.1	PDDEXK nuclease domain-containing protein	100.0	31.4	46.7
MGA_390	LOCUS_03900	sequence1:373099..373956(-)	frameshift		374137	WP_010886252.1	peptide chain release factor 2	100.0	77.2	89.5
MGA_404	LOCUS_04040	sequence1:381867..382406(+)	partial			WP_004597411.1	HD domain-containing protein	98.3	74.9	65.9
MGA_405	LOCUS_04050	sequence1:382663..383016(-)	frameshift,internal_stop_codon	382547..382549(-),383258..383260(-)	382723,383002,382582,383176,382618	WP_004599394.1	MFS transporter	79.5	22.4	43.9
MGA_406	LOCUS_04060	sequence1:383444..384265(-)	partial			WP_004597348.1	rod shape-determining protein RodA	100.0	74.6	84.2
MGA_415	LOCUS_04150	sequence1:393469..393990(-)	frameshift		394099	WP_004597364.1	virB8 family protein	100.0	74.6	82.1
MGA_441	LOCUS_04410	sequence1:421951..422262(+)	internal_stop_codon	422260..422262(+)		WP_010889811.1	ATP-binding cassette domain-containing protein	89.3	16.9	48.9
MGA_442	LOCUS_04420	sequence1:422395..423012(+)	internal_stop_codon	423010..423012(+),422260..422262(+)		WP_000626143.1	ABC-F family ATPase	100.0	37.7	41.5
MGA_443	LOCUS_04430	sequence1:423076..423483(+)	frameshift,internal_stop_codon	423010..423012(+)	423474	WP_005168223.1	ABC-F family ATPase	94.8	24.3	43.4
MGA_463	LOCUS_04630	sequence1:440241..440438(+)	internal_stop_codon	440436..440438(+)		WP_011337003.1	YifB family Mg chelatase-like AAA ATPase	95.4	12.1	58.1
MGA_464	LOCUS_04640	sequence1:440736..441041(+)	internal_stop_codon	441039..441041(+),440727..440729(+),441153..441155(+)		WP_064241607.1	YifB family Mg chelatase-like AAA ATPase	100.0	19.4	58.4
MGA_474	LOCUS_04740	sequence1:446965..447615(+)	internal_stop_codon	447613..447615(+)		WP_164928615.1	hypothetical protein	54.6	26.3	32.2
MGA_479	LOCUS_04790	sequence1:453392..453835(-)	frameshift,internal_stop_codon	453389..453391(-),453965..453967(-)	453808,453913,454114	WP_011390942.1	DNA-processing protein DprA	94.6	37.4	51.4
MGA_485	LOCUS_04850	sequence1:458755..459003(+)	partial			WP_011389772.1	HigA family addiction module antitoxin	78.0	64.6	56.2
MGA_489	LOCUS_04890	sequence1:462249..463595(+)	partial			WP_011461005.1	glycosyltransferase	71.2	39.0	25.1
MGA_502	LOCUS_05020	sequence1:474612..475364(-)	frameshift		474626	WP_003971741.1	spore photoproduct lyase family protein	96.4	62.1	39.5
MGA_503	LOCUS_05030	sequence1:475480..475695(+)	partial			WP_126352787.1	DUF4385 domain-containing protein	53.5	21.3	60.5
MGA_520	LOCUS_05200	sequence1:489006..489746(-)	partial			WP_004597496.1	O-antigen ligase	100.0	60.7	74.8
MGA_522	LOCUS_05220	sequence1:491164..491664(+)	internal_stop_codon	491044..491046(+)		WP_003697216.1	phage terminase large subunit	83.7	30.9	38.3
MGA_540	LOCUS_05400	sequence1:510514..511377(+)	partial			WP_004599437.1	T4SS guanine nucleotide exchange effector RalF	57.1	33.2	32.7
MGA_556	LOCUS_05560	sequence1:524770..525921(+)	partial			WP_004597555.1	cbb3-type cytochrome c oxidase subunit I	100.0	72.0	63.9
MGA_580	LOCUS_05800	sequence1:546764..547729(+)	partial			WP_010886284.1	hypothetical protein	56.7	74.1	48.4
MGA_586	LOCUS_05860	sequence1:554842..555096(-)	internal_stop_codon	554786..554788(-)		WP_011459533.1	Vat family streptogramin A O-acetyltransferase	79.8	32.9	50.0
MGA_588	LOCUS_05880	sequence1:556405..556824(-)	partial			WP_010979298.1	DUF357 domain-containing protein	86.3	51.8	32.5
MGA_597	LOCUS_05970	sequence1:565504..566211(-)	frameshift,internal_stop_codon	566217..566219(-)	566337,565474,565505,565434,566268,566413	WP_010942256.1	efflux RND transporter permease subunit	98.7	22.4	53.0
MGA_598	LOCUS_05980	sequence1:566252..566686(-)	frameshift,internal_stop_codon	566216..566218(-)	566339,566412,566267,566751	WP_013097900.1	MdtB/MuxB family multidrug efflux RND transporter permease subunit	95.8	13.4	32.9
MGA_599	LOCUS_05990	sequence1:566734..567078(-)	frameshift,internal_stop_codon	567336..567338(-),567108..567110(-)	567221,566735	WP_011144016.1	multidrug efflux RND transporter permease subunit	96.5	8.8	40.0
MGA_600	LOCUS_06000	sequence1:567377..567913(-)	frameshift,internal_stop_codon	567107..567109(-),567335..567337(-)	567996,567220,567944,567418,568154,568042	WP_010942256.1	efflux RND transporter permease subunit	93.3	16.4	50.9
MGA_601	LOCUS_06010	sequence1:568570..568932(-)	internal_stop_codon	568981..568983(-),568570..568572(-)		WP_012546440.1	efflux RND transporter periplasmic adaptor subunit	98.3	32.6	38.1
MGA_602	LOCUS_06020	sequence1:568981..569580(-)	internal_stop_codon	568981..568983(-)		WP_223294613.1	efflux RND transporter periplasmic adaptor subunit	91.0	42.2	33.0
MGA_603	LOCUS_06030	sequence1:569646..570023(-)	frameshift,internal_stop_codon	570026..570028(-)	570286	WP_010937373.1	efflux transporter outer membrane subunit	91.2	22.6	41.2
MGA_657	LOCUS_06570	sequence1:625500..625742(+)	frameshift		625728,625404,625964	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	93.8	3.2	73.3
MGA_660	LOCUS_06600	sequence1:628951..629169(+)	frameshift		629166	WP_004597783.1	gamma carbonic anhydrase family protein	97.2	37.8	81.4
MGA_661	LOCUS_06610	sequence1:629241..629459(+)	frameshift		629166	WP_004597783.1	gamma carbonic anhydrase family protein	95.8	37.3	85.5
MGA_666	LOCUS_06660	sequence1:632935..633840(+)	frameshift		633822	WP_003114701.1	fimbrial biogenesis outer membrane usher protein	81.1	28.9	26.8
MGA_670	LOCUS_06700	sequence1:635449..635946(+)	partial			WP_046695056.1	spore coat U domain-containing protein	73.3	70.8	30.8
MGA_679	LOCUS_06790	sequence1:644927..645106(+)	frameshift,internal_stop_codon	645262..645264(+),644759..644761(+)	645152,645085,645294	WP_004599081.1	pentapeptide repeat-containing protein	86.4	5.4	58.8
MGA_680	LOCUS_06800	sequence1:645321..645836(+)	frameshift,internal_stop_codon	645262..645264(+)	645152,645085,645294	WP_004599081.1	pentapeptide repeat-containing protein	61.4	11.2	51.4
MGA_698	LOCUS_06980	sequence1:665916..666122(-)	frameshift,internal_stop_codon	665916..665918(-)	665729	WP_004599090.1	class II aldolase/adducin family protein	100.0	29.4	92.6
MGA_699	LOCUS_06990	sequence1:666358..667791(-)	partial			WP_000505756.1	hypothetical protein	83.2	65.4	19.0
MGA_704	LOCUS_07040	sequence1:673806..674135(+)	partial			WP_010867279.1	biotin transporter BioY	93.6	57.7	42.2
MGA_708	LOCUS_07080	sequence1:676404..676565(+)	frameshift		676748,676523,676628	WP_004599065.1	phospholipase	73.6	6.5	69.2
MGA_709	LOCUS_07090	sequence1:676736..677245(+)	frameshift		676628,677238,677419,676523,676748	WP_004599065.1	phospholipase	98.2	27.8	86.1
MGA_710	LOCUS_07100	sequence1:677268..677426(+)	frameshift		677417,677236	WP_004599065.1	phospholipase	96.2	8.2	84.0
MGA_711	LOCUS_07110	sequence1:677545..678288(+)	frameshift		677417	WP_004599065.1	phospholipase	87.4	36.1	77.3
MGA_744	LOCUS_07440	sequence1:701130..701426(-)	internal_stop_codon	701460..701462(-)		WP_010947882.1	GNAT family N-acetyltransferase	94.9	27.4	48.4
MGA_745	LOCUS_07450	sequence1:701460..701675(-)	internal_stop_codon	701460..701462(-)		WP_010947882.1	GNAT family N-acetyltransferase	100.0	20.5	53.5
MGA_754	LOCUS_07540	sequence1:708853..709425(+)	frameshift		708768,708675,708868,708816	WP_011057477.1	DNA adenine methylase	94.7	61.5	47.6
MGA_765	LOCUS_07650	sequence1:718511..718993(+)	frameshift		718987	WP_004599494.1	ATP-binding protein	99.4	17.6	87.7
MGA_766	LOCUS_07660	sequence1:718972..719397(+)	frameshift		719392,718987,719501	WP_004599494.1	ATP-binding protein	95.0	14.5	80.6
MGA_767	LOCUS_07670	sequence1:719503..720453(+)	frameshift,internal_stop_codon	720596..720598(+)	720448,719500,719391	WP_004599494.1	ATP-binding protein	99.4	34.1	81.5
MGA_768	LOCUS_07680	sequence1:721100..721270(+)	frameshift		720920,720965,721061	WP_004599494.1	ATP-binding protein	100.0	6.2	86.0
MGA_769	LOCUS_07690	sequence1:721392..722408(+)	partial			WP_000640062.1	LD-carboxypeptidase	75.4	74.2	27.7
MGA_783	LOCUS_07830	sequence1:734794..735009(-)	frameshift		734820,734709,735046,735215	WP_041078769.1	Rpn family recombination-promoting nuclease/putative transposase	88.7	18.8	58.7
MGA_784	LOCUS_07840	sequence1:735023..735238(-)	frameshift		734820,735046,735215	WP_041078769.1	Rpn family recombination-promoting nuclease/putative transposase	87.3	18.5	61.3
MGA_786	LOCUS_07860	sequence1:735711..735911(+)	frameshift,internal_stop_codon	735909..735911(+)	735992,735697,736178	WP_004597718.1	glycosyltransferase family 8 protein	98.5	13.3	78.5
MGA_787	LOCUS_07870	sequence1:736269..736538(+)	frameshift		736177,736002,736550,736535	WP_004597718.1	glycosyltransferase family 8 protein	100.0	18.2	79.8
MGA_788	LOCUS_07880	sequence1:736603..736932(+)	frameshift,internal_stop_codon	736959..736961(+),736932..736934(+)	736556,736535	WP_004597718.1	glycosyltransferase family 8 protein	98.2	21.9	84.1
MGA_800	LOCUS_08000	sequence1:749532..749918(-)	partial			WP_005496331.1	Fe-S cluster assembly transcriptional regulator IscR	96.9	72.0	40.3
MGA_805	LOCUS_08050	sequence1:753158..753325(-)	frameshift,internal_stop_codon	753110..753112(-),753158..753160(-)	753073	WP_041078769.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	16.4	54.5
MGA_823	LOCUS_08230	sequence1:766643..766903(-)	frameshift		766705,766426	WP_003022650.1	aromatic amino acid transport family protein	73.3	15.7	39.7
MGA_826	LOCUS_08260	sequence1:769288..770913(+)	frameshift		769129,769132,769126	WP_011056556.1	pentapeptide repeat-containing protein	42.9	54.6	26.8
MGA_849	LOCUS_08490	sequence1:790648..791418(-)	partial			WP_010963925.1	phosphatase PAP2 family protein	79.7	71.7	25.5
MGA_851	LOCUS_08510	sequence1:797444..798403(-)	frameshift,internal_stop_codon	798532..798534(-)	798504,797547,798628	WP_004599039.1	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	94.0	45.1	69.5
MGA_852	LOCUS_08520	sequence1:798611..799012(-)	frameshift,internal_stop_codon	798532..798534(-)	799016,798504,798628	WP_004599039.1	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	95.5	17.6	74.0
MGA_853	LOCUS_08530	sequence1:799014..799403(-)	frameshift		799016	WP_004599039.1	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	100.0	19.0	82.5
MGA_858	LOCUS_08580	sequence1:804105..804293(+)	frameshift		804272	WP_004599035.1	sigma-54 dependent transcriptional regulator	90.3	11.8	96.4
MGA_863	LOCUS_08630	sequence1:810895..811275(-)	partial			WP_004597869.1	hypothetical protein	100.0	72.8	80.2
MGA_874	LOCUS_08740	sequence1:822125..822691(-)	internal_stop_codon	822707..822709(-)		WP_005783729.1	DNA alkylation repair protein	98.4	80.6	43.9
MGA_876	LOCUS_08760	sequence1:822798..823070(-)	frameshift		823042	WP_015444602.1	trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase	90.0	22.9	70.4
MGA_877	LOCUS_08770	sequence1:823025..823309(-)	frameshift		823042	WP_015444602.1	trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase	92.6	24.6	63.2
MGA_882	LOCUS_08820	sequence1:826834..827640(-)	frameshift,internal_stop_codon	826834..826836(-),826822..826824(-),827760..827762(-)	827696,827629	WP_010938997.1	type I restriction-modification system subunit M	96.6	50.8	56.1
MGA_884	LOCUS_08840	sequence1:827935..828207(-)	frameshift,internal_stop_codon	827760..827762(-)	827696,827946	WP_010938997.1	type I restriction-modification system subunit M	95.6	17.0	48.8
MGA_900	LOCUS_09000	sequence1:835927..836235(-)	frameshift		836303	WP_011109297.1	HEPN domain-containing protein	94.1	32.7	39.2
MGA_911	LOCUS_09110	sequence1:849358..849786(+)	frameshift,internal_stop_codon	849785..849787(+)	849468,849511	WP_004597411.1	HD domain-containing protein	99.3	59.1	65.2
MGA_914	LOCUS_09140	sequence1:850546..850767(-)	frameshift,internal_stop_codon	850545..850547(-)	851008,850794,850923,850463	WP_004599394.1	MFS transporter	97.3	17.4	48.7
MGA_918	LOCUS_09180	sequence1:853170..853577(-)	internal_stop_codon	853638..853640(-),853170..853172(-)		WP_004599394.1	MFS transporter	94.1	28.5	35.4
MGA_919	LOCUS_09190	sequence1:853638..853952(-)	frameshift,internal_stop_codon	854146..854148(-),853638..853640(-),854101..854103(-)	853947	WP_004599394.1	MFS transporter	96.2	22.8	47.0
MGA_926	LOCUS_09260	sequence1:859926..860183(+)	frameshift		860159	WP_011035918.1	glycosyltransferase family 2 protein	81.2	11.2	50.7
MGA_927	LOCUS_09270	sequence1:860189..860539(+)	frameshift		860471,860159	WP_011228162.1	glycosyltransferase	81.9	15.3	56.8
MGA_951	LOCUS_09510	sequence1:888086..888232(+)	internal_stop_codon	888230..888232(+),888326..888328(+)		WP_001071679.1	aminoglycoside phosphotransferase family protein	83.3	13.7	67.5
MGA_952	LOCUS_09520	sequence1:888586..888870(+)	frameshift,internal_stop_codon	888326..888328(+),888869..888871(+)	888562	WP_014328866.1	aminoglycoside phosphotransferase family protein	98.9	31.0	53.8
MGA_954	LOCUS_09530	sequence1:891652..892056(+)	internal_stop_codon	891478..891480(+),892054..892056(+),892093..892095(+)		WP_011815761.1	DUF2157 domain-containing protein	97.8	37.2	51.9
MGA_969	LOCUS_09680	sequence1:902757..902927(+)	internal_stop_codon	902733..902735(+)		WP_009905693.1	GNAT family N-acetyltransferase	100.0	40.9	44.6
MGA_971	LOCUS_09700	sequence1:904326..904739(+)	frameshift		904733	WP_041170130.1	nucleotidyltransferase and HEPN domain-containing protein	85.4	38.7	32.2
MGA_988	LOCUS_09870	sequence1:922758..923039(-)	frameshift		923019,922799	WP_003895563.1	flavodoxin family protein	72.0	31.6	53.7
MGA_1005	LOCUS_10040	sequence1:937227..937448(+)	frameshift,internal_stop_codon	937447..937449(+)	936985,937530,937070,937199	WP_004599394.1	MFS transporter	97.3	17.4	48.7
MGA_1008	LOCUS_10070	sequence1:938208..938636(-)	frameshift,internal_stop_codon	938207..938209(-)	938482,938525	WP_004597411.1	HD domain-containing protein	99.3	59.1	65.2
MGA_1045	LOCUS_10440	sequence1:961731..961988(+)	frameshift,internal_stop_codon	961986..961988(+)	962024	WP_001764187.1	serine protease inhibitor ecotin	76.5	39.6	47.7
MGA_1046	LOCUS_10450	sequence1:962035..962214(+)	frameshift,internal_stop_codon	961986..961988(+)	962012	WP_038420230.1	serine protease inhibitor ecotin	94.9	33.1	51.8
MGA_1061	LOCUS_10600	sequence1:977836..978240(-)	frameshift		977880	WP_037402650.1	ATP-binding protein	85.1	29.6	45.2
MGA_1071	LOCUS_10700	sequence1:984703..985104(+)	internal_stop_codon	985102..985104(+)		WP_002208590.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	30.8	8.8	61.0
MGA_1073	LOCUS_10720	sequence1:985581..985967(+)	frameshift		985491	WP_011268344.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	87.5	23.9	27.6
MGA_1076	LOCUS_10750	sequence1:987013..987228(-)	internal_stop_codon	987394..987396(-)		WP_010886344.1	polyhydroxyalkanoate depolymerase	66.2	11.1	76.6
MGA_1077	LOCUS_10760	sequence1:987394..987645(-)	frameshift,internal_stop_codon	987393..987395(-)	987722	WP_010886344.1	polyhydroxyalkanoate depolymerase	100.0	19.6	85.5
MGA_1078	LOCUS_10770	sequence1:987714..987911(-)	frameshift,internal_stop_codon	988132..988134(-)	987725	WP_010886344.1	polyhydroxyalkanoate depolymerase	96.9	14.9	87.3
MGA_1095	LOCUS_10940	sequence1:1004437..1004823(-)	partial			WP_010886349.1	hypothetical protein	78.9	15.4	85.1
MGA_1096	LOCUS_10950	sequence1:1004745..1005047(-)	internal_stop_codon	1005159..1005161(-)		WP_010886349.1	hypothetical protein	94.0	14.3	73.4
MGA_1097	LOCUS_10960	sequence1:1005159..1005308(-)	frameshift,internal_stop_codon	1005159..1005161(-)	1005339	WP_010886349.1	hypothetical protein	100.0	7.5	69.4
MGA_1098	LOCUS_10970	sequence1:1005322..1005879(-)	frameshift,internal_stop_codon	1005919..1005921(-),1005159..1005161(-)	1005342	WP_010886349.1	hypothetical protein	96.8	27.3	72.1
MGA_1099	LOCUS_10980	sequence1:1005919..1006251(-)	internal_stop_codon	1005919..1005921(-)		WP_010886349.1	hypothetical protein	98.2	16.5	72.2
MGA_1101	LOCUS_11000	sequence1:1007020..1007391(+)	frameshift,internal_stop_codon	1006981..1006983(+)	1007385	WP_013525049.1	SDR family oxidoreductase	100.0	28.3	26.8
MGA_1102	LOCUS_11010	sequence1:1007430..1007747(+)	frameshift		1007388	WP_010947032.1	NAD(P)H-binding protein	87.6	21.3	29.3
MGA_1116	LOCUS_11150	sequence1:1023187..1023705(+)	partial			WP_004598889.1	heme lyase CcmF/NrfE family subunit	99.4	25.5	81.9
MGA_1122	LOCUS_11210	sequence1:1031076..1031681(-)	partial			WP_009561565.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	62.2	17.6	41.1
MGA_1124	LOCUS_11230	sequence1:1033033..1033356(-)	partial			WP_010886354.1	palindromic element RPE3 domain-containing protein	56.1	38.2	83.3
MGA_1130	LOCUS_11290	sequence1:1037329..1038183(-)	partial			WP_023003304.1	M23 family metallopeptidase	35.6	34.2	49.5
MGA_1134	LOCUS_11330	sequence1:1043768..1044199(+)	frameshift		1044166	WP_004597411.1	HD domain-containing protein	93.0	56.6	67.7
MGA_1135	LOCUS_11340	sequence1:1044611..1044970(-)	frameshift,internal_stop_codon	1044568..1044570(-),1045018..1045020(-)	1044618,1044963,1044558	WP_004599394.1	MFS transporter	95.0	25.8	43.4
MGA_1136	LOCUS_11350	sequence1:1045018..1045443(-)	frameshift,internal_stop_codon	1045018..1045020(-),1045474..1045476(-)	1044963	WP_004599394.1	MFS transporter	97.2	32.9	43.8
MGA_1137	LOCUS_11360	sequence1:1045474..1045731(-)	internal_stop_codon	1045474..1045476(-)		WP_004599394.1	MFS transporter	97.6	18.9	69.9
MGA_1139	LOCUS_11380	sequence1:1046738..1046935(-)	partial			WP_004597055.1	hypothetical protein	100.0	43.9	78.5
MGA_1140	LOCUS_11390	sequence1:1046944..1047084(-)	frameshift		1047088	WP_004597052.1	hypothetical protein	100.0	48.9	84.8
MGA_1159	LOCUS_11580	sequence1:1059730..1060161(-)	frameshift,internal_stop_codon	1059643..1059645(-),1059730..1059732(-)	1059480	WP_011202665.1	AAA domain-containing protein	86.0	12.2	36.7
MGA_1161	LOCUS_11600	sequence1:1060850..1061584(-)	partial			WP_000080564.1	DEAD/DEAH box helicase	73.4	16.2	35.2
MGA_1167	LOCUS_11660	sequence1:1064411..1064566(-)	frameshift		1064427,1064622	WP_004599629.1	alpha/beta hydrolase	76.5	11.5	82.1
MGA_1168	LOCUS_11670	sequence1:1064575..1064817(-)	frameshift,internal_stop_codon	1064860..1064862(-)	1064427,1065004,1064622	WP_004599629.1	alpha/beta hydrolase	80.0	18.9	84.4
MGA_1169	LOCUS_11680	sequence1:1064984..1065355(-)	frameshift,internal_stop_codon	1064860..1064862(-)	1065004,1065335	WP_004599629.1	alpha/beta hydrolase	89.4	28.9	57.0
MGA_1187	LOCUS_11860	sequence1:1076690..1077310(-)	frameshift,internal_stop_codon	1077432..1077434(-)	1077419	WP_011461645.1	Rpn family recombination-promoting nuclease/putative transposase	90.8	64.2	35.4
MGA_1198	LOCUS_11970	sequence1:1084397..1084636(+)	frameshift,internal_stop_codon	1084635..1084637(+),1084188..1084190(+),1084161..1084163(+),1084191..1084193(+),1084278..1084280(+),1084167..1084169(+)	1084289	WP_001129615.1	MBL fold metallo-hydrolase	84.8	20.1	55.2
MGA_1208	LOCUS_12070	sequence1:1096724..1097095(-)	frameshift,internal_stop_codon	1097207..1097209(-)	1097152,1097109	WP_011731134.1	efflux MFS transporter LfrA	87.0	21.2	31.8
MGA_1210	LOCUS_12090	sequence1:1097582..1097833(-)	frameshift		1097849,1097641,1097502	WP_011142816.1	MFS transporter	68.7	10.8	42.1
MGA_1211	LOCUS_12100	sequence1:1097847..1098257(-)	frameshift		1097849,1097650	WP_011027955.1	MFS transporter	83.1	21.2	46.9
MGA_1226	LOCUS_12250	sequence1:1112479..1112748(+)	partial			WP_103897643.1	DUF1674 domain-containing protein	59.6	57.0	64.2
MGA_1232	LOCUS_12310	sequence1:1118553..1118747(+)	frameshift		1118723	WP_003019918.1	methionine adenosyltransferase	84.4	14.0	72.2
MGA_1233	LOCUS_12320	sequence1:1118729..1119571(+)	frameshift		1118723,1119566	WP_010958613.1	methionine adenosyltransferase	99.3	70.7	64.4
MGA_1268	LOCUS_12670	sequence1:1166514..1166870(-)	internal_stop_codon	1167009..1167011(-),1166940..1166942(-),1166910..1166912(-)		WP_015444455.1	class D beta-lactamase	83.9	36.8	38.4
MGA_1269	LOCUS_12680	sequence1:1167009..1167281(-)	frameshift,internal_stop_codon	1167009..1167011(-),1166940..1166942(-),1166910..1166912(-)	1167273	WP_015444455.1	class D beta-lactamase	96.7	33.1	55.7
MGA_1286	LOCUS_12850	sequence1:1179347..1180042(-)	frameshift		1179367	WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	95.2	9.5	29.8
MGA_1293	LOCUS_12920	sequence1:1183811..1184098(+)	partial			WP_004599664.1	phasin family protein	97.9	58.5	75.3
MGA_1295	LOCUS_12940	sequence1:1184896..1185033(-)	partial			WP_004599665.1	class I poly(R)-hydroxyalkanoic acid synthase	100.0	8.4	77.6
MGA_1296	LOCUS_12950	sequence1:1185331..1185585(-)	internal_stop_codon	1185331..1185333(-)		WP_004599665.1	class I poly(R)-hydroxyalkanoic acid synthase	100.0	14.4	89.3
MGA_1299	LOCUS_12980	sequence1:1189149..1195664(-)	partial			WP_010886297.1	autotransporter outer membrane beta-barrel domain-containing protein	75.7	65.9	28.8
MGA_1302	LOCUS_13010	sequence1:1200198..1200506(+)	frameshift		1200726,1200503	WP_011338763.1	DNA repair protein RadC	78.4	31.9	44.4
MGA_1303	LOCUS_13020	sequence1:1200511..1200804(+)	frameshift		1200726,1200503	WP_010971736.1	DNA repair protein RadC	72.2	25.0	57.1
MGA_1360	LOCUS_13590	sequence1:1256479..1256961(-)	partial			WP_004596749.1	TIGR02281 family clan AA aspartic protease	100.0	69.3	93.8
MGA_1366	LOCUS_13650	sequence1:1261545..1261703(+)	partial			WP_000277238.1	type II toxin-antitoxin system YafQ family toxin	78.8	44.9	68.3
MGA_1370	LOCUS_13690	sequence1:1264740..1265702(-)	partial			WP_013023147.1	restriction endonuclease subunit S	41.2	32.2	36.2
MGA_1371	LOCUS_13700	sequence1:1265749..1266048(-)	partial			WP_001387312.1	type I restriction-modification system subunit M	67.7	13.3	39.7
MGA_1374	LOCUS_13730	sequence1:1266983..1267336(+)	frameshift		1267270	WP_002220711.1	Na+/H+ antiporter NhaA	74.4	21.8	33.3
MGA_1375	LOCUS_13740	sequence1:1267248..1267982(+)	frameshift		1268024,1267949,1267270	WP_001281946.1	Na+/H+ antiporter NhaA	91.4	57.3	40.4
MGA_1383	LOCUS_13820	sequence1:1273565..1273885(+)	frameshift,internal_stop_codon	1274040..1274042(+)	1273520,1273811	WP_010921213.1	3-hydroxybutyrate dehydrogenase	69.8	27.9	44.6
MGA_1387	LOCUS_13860	sequence1:1275685..1276065(-)	frameshift,internal_stop_codon	1275685..1275687(-)	1275648,1275642,1275636,1275645	WP_011015826.1	tetratricopeptide repeat protein	85.7	16.4	41.7
MGA_1391	LOCUS_13900	sequence1:1278989..1279225(-)	frameshift,internal_stop_codon	1278988..1278990(-)	1278945,1279185,1279252,1278860,1278975	WP_016475763.1	BRO family protein	85.9	23.9	59.7
