{
    "type": "genome",
    "identifier": "GCF_000291685.1",
    "organism": "Moritella marina ATCC 15381",
    "title": "Moritella marina ATCC 15381",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Iowa State University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000291685.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02470074",
        "wgs_master": "ALOE00000000.1",
        "refseq_category": "na",
        "taxid": "1202962",
        "species_taxid": "90736",
        "organism_name": "Moritella marina ATCC 15381",
        "infraspecific_name": "strain=ATCC 15381",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2012/08/17",
        "asm_name": "ASM29168v1",
        "asm_submitter": "Iowa State University",
        "gbrs_paired_asm": "GCA_000291685.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/291/685/GCF_000291685.1_ASM29168v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4636177",
        "genome_size_ungapped": "4636177",
        "gc_percent": "40.500000",
        "replicon_count": "0",
        "scaffold_count": "83",
        "contig_count": "83",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000291685.1-RS_2024_03_29",
        "annotation_date": "2024-03-29",
        "total_gene_count": "4140",
        "protein_coding_gene_count": "4075",
        "non_coding_gene_count": "30",
        "pubmed_id": "23105048"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2012-08-17",
    "dateModified": "2012-08-17",
    "datePublished": "2012-08-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Moritella marina ATCC 15381"
        ],
        "sample_taxid": [
            "1202962"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.321 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4636177",
        "Number of Sequences": "83",
        "Longest Sequences (bp)": "399717",
        "N50 (bp)": "147059",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "40.5",
        "Number of CDSs": "4104",
        "Average Protein Length": "324.8",
        "Coding Ratio (%)": "86.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Moritella marina",
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                "accession": "GCA_000291685.1",
                "taxid": 90736,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 1510,
                "total_fragments": 1512,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Moritella marina",
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                "accession": "GCA_000381865.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 99.9961,
                "matched_fragments": 1502,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
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                "accession": "GCA_008931805.1",
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                "status": "conclusive"
            },
            {
                "organism_name": "Moritella dasanensis",
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                "accession": "GCA_000276805.1",
                "taxid": 428031,
                "species_taxid": 428031,
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                "validated": true,
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                "matched_fragments": 1196,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Moritella yayanosii",
                "strain": "strain=DB21MT 5",
                "accession": "GCA_900465055.1",
                "taxid": 69539,
                "species_taxid": 69539,
                "relation_to_type": "type",
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                "ani": 83.5032,
                "matched_fragments": 952,
                "total_fragments": 1512,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aliivibrio fischeri",
                "strain": "strain=DSM 507",
                "accession": "GCA_023983475.1",
                "taxid": 668,
                "species_taxid": 668,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.0463,
                "matched_fragments": 121,
                "total_fragments": 1512,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio fortis",
                "strain": "strain=LMG 21557",
                "accession": "GCA_024347475.1",
                "taxid": 212667,
                "species_taxid": 212667,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9519,
                "matched_fragments": 81,
                "total_fragments": 1512,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio gigantis",
                "strain": "strain=LMG 22741",
                "accession": "GCA_024347515.1",
                "taxid": 296199,
                "species_taxid": 296199,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6732,
                "matched_fragments": 113,
                "total_fragments": 1512,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio tasmaniensis",
                "strain": "strain=LMG 20012",
                "accession": "GCA_024347635.1",
                "taxid": 212663,
                "species_taxid": 212663,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.6536,
                "matched_fragments": 92,
                "total_fragments": 1512,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Shewanella aestuarii",
                "strain": "strain=JCM 17801",
                "accession": "GCA_023283685.1",
                "taxid": 1028752,
                "species_taxid": 1028752,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1484,
                "matched_fragments": 63,
                "total_fragments": 1512,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_008931805.1",
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                "ani": 99.9944,
                "matched_fragments": 1509,
                "total_fragments": 1512,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Moritellaceae;g__Moritella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCF_015082335.1",
                "gtdb_species": "s__Moritella sp015082335",
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                "matched_fragments": 1294,
                "total_fragments": 1512,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Moritellaceae;g__Moritella",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000276805.1",
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                "matched_fragments": 1194,
                "total_fragments": 1512,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Moritellaceae;g__Moritella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_002836355.1",
                "gtdb_species": "s__Moritella sp002836355",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Moritellaceae;g__Moritella",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000170855.1",
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                "matched_fragments": 1073,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Moritellaceae;g__Moritella",
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            },
            {
                "accession": "GCF_018219155.1",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
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                "num_clustered_genomes": 13,
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            },
            {
                "accession": "GCF_018219455.1",
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                "ani": 83.468,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Moritellaceae;g__Moritella",
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                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.0,
        "cell_length": 0.653,
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        "gc_content": 40.5,
        "coding_genes": 3998.166,
        "rRNA16S_genes": 11.0,
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        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
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        "bacillus_cell_shape": 0.0,
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        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    },
    "_genome_taxon": [
        "Moritella",
        "marina",
        "ATCC",
        "15381"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}