{ "type": "genome", "identifier": "GCF_000296835.1", "organism": "Lactobacillus hominis DSM 23910 = CRBIP 24.179", "title": "Lactobacillus hominis DSM 23910 = CRBIP 24.179", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Sycou", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000296835.1", "bioproject": "PRJNA224116", "biosample": "SAMEA2272002", "wgs_master": "CAKE00000000.1", "refseq_category": "reference genome", "taxid": "1423758", "species_taxid": "1203033", "organism_name": "Lactobacillus hominis DSM 23910 = CRBIP 24.179", "infraspecific_name": "strain=type strain:CRBIP 24.179", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2012/07/09", "asm_name": "ASM29683v1", "asm_submitter": "Sycou", "gbrs_paired_asm": "GCA_000296835.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/296/835/GCF_000296835.1_ASM29683v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1928135", "genome_size_ungapped": "1928135", "gc_percent": "35.000000", "replicon_count": "0", "scaffold_count": "36", "contig_count": "36", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000296835.1-RS_2024_03_20", "annotation_date": "2024-03-20", "total_gene_count": "1934", "protein_coding_gene_count": "1838", "non_coding_gene_count": "60", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2012-07-09", "dateModified": "2012-07-09", "datePublished": "2012-07-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Lactobacillus hominis DSM 23910 = CRBIP 24.179" ], "sample_taxid": [ "1423758" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "0.542 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "1928135", "Number of Sequences": "36", "Longest Sequences (bp)": "365154", "N50 (bp)": "118998", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "35.1", "Number of CDSs": "1870", "Average Protein Length": "308.3", "Coding Ratio (%)": "89.7", "Number of rRNAs": "3", "Number of tRNAs": "55", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Lactobacillus hominis", "strain": "strain=type strain:CRBIP 24.179", "accession": "GCA_000296835.1", "taxid": 1203033, "species_taxid": 1203033, 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