{ "type": "genome", "identifier": "GCF_000299915.1", "organism": "Gallaecimonas xiamenensis 3-C-1", "title": "Gallaecimonas xiamenensis 3-C-1", "description": "na", "data type": "Genome sequencing and assembly", "organization": "The Third Institute of State Oceanic Administration (SOA)", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000299915.1", "bioproject": "PRJNA224116", "biosample": "SAMN02471169", "wgs_master": "AMRI00000000.1", "refseq_category": "reference genome", "taxid": "745411", "species_taxid": "1207039", "organism_name": "Gallaecimonas xiamenensis 3-C-1", "infraspecific_name": "strain=3-C-1", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2012/09/27", "asm_name": "ASM29991v1", "asm_submitter": "The Third Institute of State Oceanic Administration (SOA)", "gbrs_paired_asm": "GCA_000299915.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/299/915/GCF_000299915.1_ASM29991v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4062282", "genome_size_ungapped": "4062282", "gc_percent": "60.500000", "replicon_count": "0", "scaffold_count": "66", "contig_count": "66", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-03-11", "total_gene_count": "3916", "protein_coding_gene_count": "3826", "non_coding_gene_count": "73", "pubmed_id": "23209203" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2012-09-27", "dateModified": "2012-09-27", "datePublished": "2012-09-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Gallaecimonas xiamenensis 3-C-1" ], "sample_taxid": [ "745411" ], 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}, { "organism_name": "Ferrimonas sediminicola", "strain": "strain=IMCC35001", "accession": "GCA_005116715.1", "taxid": 2569538, "species_taxid": 2569538, "relation_to_type": "type", "validated": true, "ani": 77.3569, "matched_fragments": 218, "total_fragments": 1324, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas hydrophila subsp. ranae", "strain": "strain=CIP 107985", "accession": "GCA_000820325.1", "taxid": 208958, "species_taxid": 644, "relation_to_type": "type", "validated": true, "ani": 77.2498, "matched_fragments": 219, "total_fragments": 1324, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromonas media", "strain": "strain=CECT 4232", "accession": "GCA_000819985.1", "taxid": 651, "species_taxid": 651, "relation_to_type": "type", "validated": true, "ani": 77.2243, "matched_fragments": 214, "total_fragments": 1324, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ferrimonas futtsuensis", 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