{
    "type": "genome",
    "identifier": "GCF_000310185.1",
    "organism": "Thauera aminoaromatica S2",
    "title": "Thauera aminoaromatica S2",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Norwegian University of Life Sciences",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000310185.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02470715",
        "wgs_master": "AMXD00000000.1",
        "refseq_category": "na",
        "taxid": "1234381",
        "species_taxid": "164330",
        "organism_name": "Thauera aminoaromatica S2",
        "infraspecific_name": "strain=S2",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2012/11/06",
        "asm_name": "ASM31018v1",
        "asm_submitter": "Norwegian University of Life Sciences",
        "gbrs_paired_asm": "GCA_000310185.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/310/185/GCF_000310185.1_ASM31018v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4280700",
        "genome_size_ungapped": "4280700",
        "gc_percent": "68.500000",
        "replicon_count": "0",
        "scaffold_count": "317",
        "contig_count": "317",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000310185.1-RS_2024_08_20",
        "annotation_date": "2024-08-20",
        "total_gene_count": "4068",
        "protein_coding_gene_count": "3864",
        "non_coding_gene_count": "61",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2012-11-06",
    "dateModified": "2012-11-06",
    "datePublished": "2012-11-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Thauera aminoaromatica S2"
        ],
        "sample_taxid": [
            "1234381"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "1.160 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4280700",
        "Number of Sequences": "317",
        "Longest Sequences (bp)": "169414",
        "N50 (bp)": "25069",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.7",
        "Number of CDSs": "3588",
        "Average Protein Length": "325.3",
        "Coding Ratio (%)": "81.8",
        "Number of rRNAs": "2",
        "Number of tRNAs": "56",
        "Number of CRISPRs": "8"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Thauera aminoaromatica",
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                "accession": "GCA_000310185.1",
                "taxid": 164330,
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1264,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Thauera phenylacetica",
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                "taxid": 164400,
                "species_taxid": 164400,
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                "validated": true,
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                "matched_fragments": 879,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "organism_name": "Thauera chlorobenzoica",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera humireducens",
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                "species_taxid": 1134435,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera chlorobenzoica",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera propionica",
                "strain": "strain=KNDSS-Mac4",
                "accession": "GCA_002245655.1",
                "taxid": 2019431,
                "species_taxid": 2019431,
                "relation_to_type": "type",
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                "matched_fragments": 731,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera aromatica",
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                "accession": "GCA_003030465.1",
                "taxid": 59405,
                "species_taxid": 59405,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera butanivorans",
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                "taxid": 86174,
                "species_taxid": 86174,
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                "ani_threshold": 95,
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            {
                "organism_name": "Thauera linaloolentis",
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                "status": "below_threshold"
            },
            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aromatoleum toluolicum",
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                "accession": "GCA_012911005.2",
                "taxid": 90060,
                "species_taxid": 90060,
                "relation_to_type": "type",
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                "ani": 80.9006,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Aromatoleum anaerobium",
                "strain": "strain=LuFRes1",
                "accession": "GCA_012910705.2",
                "taxid": 182180,
                "species_taxid": 182180,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.0186,
                "matched_fragments": 557,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nitrogeniibacter mangrovi",
                "strain": "strain=M9-3-2",
                "accession": "GCA_010983895.1",
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                "species_taxid": 2016596,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Aromatoleum buckelii",
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                "accession": "GCA_012910785.2",
                "taxid": 200254,
                "species_taxid": 200254,
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                "ani": 79.7956,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Nitrogeniibacter aestuarii",
                "strain": "strain=H1-1-2A",
                "accession": "GCA_017309585.1",
                "taxid": 2815343,
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            "contamination": 0.0,
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}