# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence1:141..464(-)	frameshift,internal_stop_codon	537..539(-)	203	WP_011071273.1	IS982-like element ISSod20 family transposase	89.7	32.9	63.5
MGA_33	LOCUS_00320	sequence1:37375..37533(+)	frameshift,internal_stop_codon	37531..37533(+)	37620	WP_141135407.1	IS3-like element ISSod1 family transposase	94.2	12.7	51.0
MGA_35	LOCUS_00340	sequence1:38177..39040(+)	partial			WP_141135407.1	IS3-like element ISSod1 family transposase	99.7	73.8	68.5
MGA_37	LOCUS_00360	sequence1:39555..40061(-)	frameshift,internal_stop_codon	39555..39557(-)	39551	WP_011816662.1	molecular chaperone	97.0	66.3	35.8
MGA_63	LOCUS_00620	sequence1:67065..67964(-)	partial			WP_000154414.1	iron uptake system protein EfeO	79.9	64.3	32.6
MGA_69	LOCUS_00670	sequence1:72424..72660(-)	partial			WP_005456668.1	type II and III secretion system protein family protein	78.2	12.5	39.3
MGA_71	LOCUS_00690	sequence1:72950..73591(+)	partial			WP_015703546.1	dihydroxyacetone kinase operon transcriptional regulator DhaR	40.8	13.5	41.4
MGA_128	LOCUS_01260	sequence1:145475..146410(-)	partial			WP_126621964.1	hemagglutinin repeat-containing protein	54.0	4.3	33.1
MGA_183	LOCUS_01810	sequence1:212322..212798(-)	partial			WP_014626156.1	DUF3100 domain-containing protein	52.5	18.4	48.2
MGA_191	LOCUS_01890	sequence1:220839..221180(-)	frameshift		221302	WP_011969426.1	hypothetical protein	99.1	38.8	61.6
MGA_192	LOCUS_01900	sequence1:221246..221635(-)	frameshift		221302	WP_011969426.1	hypothetical protein	83.7	39.4	53.5
MGA_200	LOCUS_01980	sequence1:231623..231811(-)	frameshift,internal_stop_codon	231815..231817(-)	232046	WP_000850662.1	PAP2 family phosphatase PhoN2	88.7	22.4	63.6
MGA_204	LOCUS_02020	sequence1:243571..245205(+)	partial			WP_011707469.1	FUSC family protein	27.9	22.7	35.5
MGA_217	LOCUS_02150	sequence1:258568..258765(-)	partial			WP_141135407.1	IS3-like element ISSod1 family transposase	73.8	12.4	52.1
MGA_228	LOCUS_02260	sequence1:268352..268564(+)	partial			WP_000074110.1	heme exporter protein CcmD	67.1	67.1	70.2
MGA_278	LOCUS_02760	sequence1:329505..331196(+)	partial			WP_011704912.1	glycosyl hydrolase family 18 protein	97.9	64.0	69.3
MGA_320	LOCUS_03170	sequence1:380939..381214(-)	partial			WP_011071273.1	IS982-like element ISSod20 family transposase	98.9	30.8	63.3
MGA_361	LOCUS_03570	sequence1:427832..428578(+)	frameshift		427554	WP_011817019.1	peptide chain release factor 2	100.0	67.9	96.0
MGA_372	LOCUS_03670	sequence1:441485..441862(+)	frameshift,internal_stop_codon	441862..441864(+),442089..442091(+)	441345,441450	WP_011263235.1	galactokinase	100.0	32.6	64.0
MGA_388	LOCUS_03830	sequence1:459287..459715(-)	partial			WP_011459678.1	N-acetyltransferase	98.6	48.1	32.1
MGA_389	LOCUS_03840	sequence1:460312..461148(-)	partial			WP_011391615.1	substrate-binding domain-containing protein	80.6	74.0	35.2
MGA_400	LOCUS_03930	sequence1:473917..475884(-)	partial			WP_011962335.1	DUF262 domain-containing protein	35.0	43.0	27.8
MGA_401	LOCUS_03940	sequence1:475877..477289(-)	partial			WP_000301909.1	DUF262 domain-containing protein	81.3	73.4	23.8
MGA_402	LOCUS_03950	sequence1:477432..478700(-)	partial			WP_011476039.1	restriction endonuclease subunit S	39.3	44.1	39.2
MGA_407	LOCUS_03990	sequence1:484889..485137(+)	frameshift		485083	WP_145933944.1	IS3 family transposase	72.0	15.9	55.9
MGA_408	LOCUS_04000	sequence1:485098..485403(+)	frameshift		485083	WP_157130138.1	IS3 family transposase	90.1	24.6	54.9
MGA_413	LOCUS_04050	sequence1:488812..492747(-)	partial			WP_013098820.1	contact-dependent inhibition effector 16S rRNA endonuclease	73.4	28.1	47.5
MGA_427	LOCUS_04190	sequence1:506425..506643(-)	partial			WP_001367084.1	AlpA family phage regulatory protein	81.9	74.7	64.4
MGA_429	LOCUS_04210	sequence1:508497..511091(+)	partial			WP_000963924.1	hypothetical protein	94.6	63.4	67.7
MGA_430	LOCUS_04220	sequence1:511364..511960(+)	partial			WP_094958998.1	IS3 family transposase	99.0	50.0	83.7
MGA_431	LOCUS_04230	sequence1:512016..513395(+)	partial			WP_002387067.1	ATP-binding protein	98.7	74.9	43.2
MGA_443	LOCUS_04350	sequence1:523867..525324(+)	partial			WP_002209665.1	DUF2974 domain-containing protein	48.7	74.1	39.2
MGA_445	LOCUS_04370	sequence1:526841..527029(-)	frameshift		527022,527015	WP_003105930.1	sodium/glutamate symporter	100.0	15.3	62.9
MGA_472	LOCUS_04640	sequence1:562488..566672(+)	partial			WP_010895621.1	two-partner secretion system exoprotein TpsA1	7.9	2.0	54.9
MGA_489	LOCUS_04810	sequence1:579468..582035(+)	partial			WP_011106489.1	hypothetical protein	7.5	3.9	56.2
MGA_499	LOCUS_04910	sequence1:589650..590318(-)	partial			WP_015705401.1	winged helix-turn-helix domain-containing protein	33.3	32.3	43.9
MGA_522	LOCUS_05140	sequence1:612960..613811(+)	partial			WP_002211557.1	two-component system QseEF-associated lipoprotein QseG	83.4	72.5	46.1
MGA_530	LOCUS_05220	sequence1:622338..623129(-)	partial			WP_013094835.1	fimbrial protein	93.2	69.2	40.2
MGA_546	LOCUS_05380	sequence1:637298..637753(+)	partial			WP_002209828.1	enhanced serine sensitivity protein SseB	88.7	42.0	43.7
MGA_547	LOCUS_05390	sequence1:638434..640734(-)	partial			WP_002211936.1	type VI secretion system membrane subunit	98.7	66.5	49.3
MGA_561	LOCUS_05500	sequence1:653467..654252(-)	partial			WP_061709398.1	type VI secretion system Vgr family protein	71.3	22.3	37.4
MGA_576	LOCUS_05640	sequence1:677958..679106(-)	partial			WP_015039930.1	M4 family metallopeptidase	69.9	76.2	41.6
MGA_614	LOCUS_06000	sequence1:721006..721173(+)	internal_stop_codon	721171..721173(+)		WP_000985271.1	thiosulfate utilization sulfurtransferase TsuB/YeeD	92.7	68.0	66.7
MGA_617	LOCUS_06030	sequence1:725843..726319(+)	partial			WP_004192119.1	MEKHLA domain-containing protein	60.8	61.9	45.8
MGA_638	LOCUS_06240	sequence1:755216..756142(-)	partial			WP_010946906.1	Dot/Icm type IV secretion system effector LidL	86.0	63.2	29.4
MGA_639	LOCUS_06250	sequence1:756207..756680(-)	internal_stop_codon	756756..756758(-)		WP_000540113.1	HP1117 family Sel1-like repeat protein	80.3	50.8	32.3
MGA_641	LOCUS_06270	sequence1:757305..758096(-)	partial			WP_010947086.1	SEL1-like repeat protein	65.0	45.5	36.8
MGA_664	LOCUS_06500	sequence1:781611..782708(+)	partial			WP_158707352.1	calcium-binding protein	78.1	16.6	30.1
MGA_706	LOCUS_06920	sequence1:832055..832201(+)	frameshift,internal_stop_codon	832256..832258(+)	832273,832343,832183	WP_013096602.1	GNAT family N-acetyltransferase	95.8	25.3	56.5
MGA_707	LOCUS_06930	sequence1:832381..832635(+)	frameshift,internal_stop_codon	832256..832258(+)	832273,832186,832349	WP_013096602.1	GNAT family N-acetyltransferase	82.1	37.9	46.4
MGA_712	LOCUS_06980	sequence1:838233..838496(-)	partial			WP_019082045.1	class I ribonucleotide reductase maintenance protein YfaE	70.1	71.8	72.1
MGA_720	LOCUS_07060	sequence1:852839..853123(-)	frameshift,internal_stop_codon	853156..853158(-)	853182	WP_001387389.1	site-specific integrase	92.6	22.5	70.1
MGA_741	LOCUS_07270	sequence1:876662..878023(-)	partial			WP_004526222.1	ATP-binding protein	74.8	78.1	30.1
MGA_812	LOCUS_07970	sequence1:957185..957376(+)	partial			WP_013097094.1	NAD-dependent protein deacylase	87.3	20.1	74.5
MGA_832	LOCUS_08160	sequence1:980015..980290(-)	partial			WP_000741335.1	site-specific integrase	100.0	23.9	70.3
MGA_846	LOCUS_08300	sequence1:996323..996622(+)	internal_stop_codon	996620..996622(+),996296..996298(+)		WP_003687408.1	DUF1543 domain-containing protein	100.0	62.0	47.2
MGA_932	LOCUS_09140	sequence1:1096763..1097032(-)	frameshift,internal_stop_codon	1096766..1096768(-)	1096783	WP_011104860.1	DUF1349 domain-containing protein	88.8	41.4	50.6
MGA_954	LOCUS_09360	sequence1:1117658..1118446(-)	partial			WP_002367629.1	membrane integrity lipid transport subunit YebS	97.3	61.7	62.9
MGA_978	LOCUS_09600	sequence1:1142707..1144890(+)	partial			WP_012582870.1	extracellular solute-binding protein	46.1	79.2	26.3
MGA_1019	LOCUS_10010	sequence1:1194275..1195276(-)	internal_stop_codon	1195298..1195300(-)		WP_015366209.1	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	99.4	62.3	69.5
MGA_1020	LOCUS_10020	sequence1:1195298..1195906(-)	internal_stop_codon	1195298..1195300(-)		WP_015366209.1	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	99.0	38.0	68.3
MGA_1032	LOCUS_10140	sequence1:1209080..1210756(+)	partial			WP_010889250.1	carboxylesterase/lipase family protein	59.3	60.0	36.3
MGA_1058	LOCUS_10390	sequence1:1236388..1237077(+)	partial			WP_002210584.1	bile acid:sodium symporter	100.0	66.7	74.7
MGA_1074	LOCUS_10550	sequence1:1253242..1253556(+)	frameshift		1253467,1253239	WP_010940997.1	type II secretion system secretin GspD	57.7	9.5	41.7
MGA_1085	LOCUS_10660	sequence1:1261240..1261455(+)	frameshift,internal_stop_codon	1261195..1261197(+)	1261094	WP_099092833.1	IS1 family transposase	100.0	30.7	94.4
MGA_1096	LOCUS_10770	sequence1:1268722..1269234(-)	partial			WP_011016056.1	toxin-antitoxin system YwqK family antitoxin	58.8	52.9	33.0
MGA_1097	LOCUS_10780	sequence1:1269435..1269854(-)	partial			WP_010979664.1	trimeric intracellular cation channel family protein	98.6	67.5	35.5
MGA_1098	LOCUS_10790	sequence1:1270287..1270556(-)	frameshift		1270570	WP_001208015.1	MBL fold metallo-hydrolase	95.5	32.1	78.8
MGA_1099	LOCUS_10800	sequence1:1270550..1271041(-)	frameshift		1270570	WP_001208015.1	MBL fold metallo-hydrolase	95.7	58.9	64.1
MGA_1103	LOCUS_10840	sequence1:1274059..1274745(+)	partial			WP_013530571.1	SDR family oxidoreductase	91.7	71.1	63.2
MGA_1118	LOCUS_10980	sequence1:1294921..1295811(+)	partial			WP_002680481.1	formylglycine-generating enzyme family protein	69.6	59.9	33.5
MGA_1129	LOCUS_11090	sequence1:1306414..1306920(-)	partial			WP_010895556.1	beta-ketoacyl-ACP synthase II	92.9	37.2	68.8
MGA_1134	LOCUS_11140	sequence1:1311815..1312111(+)	partial			WP_005694556.1	M20 family metallo-hydrolase	83.7	19.6	48.2
MGA_1156	LOCUS_11360	sequence1:1337400..1343657(-)	partial			WP_008363296.1	DUF4011 domain-containing protein	62.7	77.5	22.8
MGA_1166	LOCUS_11460	sequence1:1351184..1352053(+)	partial			WP_011969224.1	SMP-30/gluconolactonase/LRE family protein	88.6	45.3	36.0
MGA_1170	LOCUS_11500	sequence1:1355440..1355706(-)	internal_stop_codon	1355740..1355742(-)		WP_000701105.1	type 3 secretion system effector OspC3	78.4	14.0	47.8
MGA_1171	LOCUS_11510	sequence1:1355740..1356900(-)	internal_stop_codon	1355740..1355742(-)		WP_001026857.1	type 3 secretion system effector OspC1	99.7	80.9	48.6
MGA_1213	LOCUS_11930	sequence1:1411621..1412439(+)	partial			WP_011970686.1	class I SAM-dependent methyltransferase	46.3	47.7	33.8
MGA_1215	LOCUS_11950	sequence1:1413056..1414627(+)	partial			WP_011104220.1	non-ribosomal peptide synthetase	93.5	8.2	38.9
MGA_1231	LOCUS_12110	sequence1:1432504..1433505(+)	partial			WP_000333314.1	glycine oxidase ThiO	65.5	59.3	23.2
MGA_1277	LOCUS_12560	sequence1:1490993..1491442(+)	frameshift,internal_stop_codon	1490994..1490996(+)	1491011,1491407	WP_000048924.1	FMN-dependent NADH-azoreductase	89.9	67.2	57.0
MGA_1288	LOCUS_12670	sequence1:1501689..1502579(-)	frameshift		1502584,1501440,1501756	WP_005173543.1	IS1182-like element ISYen4 family transposase	92.6	55.2	67.2
MGA_1289	LOCUS_12680	sequence1:1502570..1502761(-)	frameshift		1502584	WP_011817033.1	IS1182-like element ISYen4 family transposase	93.7	12.1	83.1
MGA_1307	LOCUS_12860	sequence1:1520201..1520617(-)	partial			WP_002211188.1	multidrug/spermidine efflux SMR transporter subunit MdtJ	77.5	72.8	72.9
MGA_1338	LOCUS_13160	sequence1:1551815..1553092(+)	frameshift		1551545	WP_014206127.1	alpha/beta hydrolase	87.1	66.7	29.3
MGA_1375	LOCUS_13530	sequence1:1595694..1595867(-)	frameshift,internal_stop_codon	1596060..1596062(-)	1595723	WP_011261713.1	glutathione S-transferase N-terminal domain-containing protein	89.5	21.3	49.0
MGA_1376	LOCUS_13540	sequence1:1596060..1596305(-)	internal_stop_codon	1596060..1596062(-)		WP_011261713.1	glutathione S-transferase N-terminal domain-containing protein	98.8	32.2	55.0
MGA_1412	LOCUS_13900	sequence1:1635080..1635649(+)	frameshift		1635601	WP_011090406.1	HD domain-containing protein	92.1	81.7	63.2
MGA_1452	LOCUS_14300	sequence1:1677574..1678326(+)	partial			WP_151652833.1	AraC family transcriptional regulator	34.4	31.9	37.5
MGA_1479	LOCUS_14560	sequence1:1711030..1711401(+)	partial			WP_002209231.1	MDR efflux pump AcrAB transcriptional activator RobA	83.7	35.1	55.3
MGA_1501	LOCUS_14780	sequence1:1731927..1732376(-)	partial			WP_011390561.1	isoprenylcysteine carboxylmethyltransferase family protein	77.2	64.0	32.2
MGA_1569	LOCUS_15460	sequence1:1798797..1799210(+)	frameshift		1799207	WP_014207780.1	LysR substrate-binding domain-containing protein	98.5	45.3	54.8
MGA_1570	LOCUS_15470	sequence1:1799258..1799683(+)	frameshift		1799207	WP_014207780.1	LysR substrate-binding domain-containing protein	96.5	46.0	40.9
MGA_1611	LOCUS_15870	sequence1:1845719..1846765(+)	partial			WP_116269310.1	tetratricopeptide repeat protein	86.5	70.3	37.4
MGA_1627	LOCUS_16030	sequence1:1864226..1864534(-)	internal_stop_codon	1864544..1864546(-)		WP_005483368.1	DMT family transporter	91.2	31.8	40.9
MGA_1628	LOCUS_16040	sequence1:1864544..1865098(-)	internal_stop_codon	1864544..1864546(-)		WP_005483368.1	DMT family transporter	97.8	61.3	48.9
MGA_1652	LOCUS_16280	sequence1:1890690..1892045(+)	partial			WP_099114440.1	flagellar hook-length control protein FliK	31.7	32.3	45.8
MGA_1661	LOCUS_16370	sequence1:1898997..1899563(-)	partial			WP_003113742.1	cytochrome c	80.3	33.7	55.6
MGA_1662	LOCUS_16380	sequence1:1899586..1900380(-)	partial			WP_011706746.1	cytochrome c	80.7	53.1	46.9
MGA_1699	LOCUS_16740	sequence1:1944944..1945804(-)	partial			WP_005168761.1	flagellar motor protein MotB	95.5	66.4	63.3
MGA_1704	LOCUS_16790	sequence1:1950187..1952310(-)	partial			WP_010973771.1	metallophosphoesterase	69.0	78.1	32.3
MGA_1706	LOCUS_16810	sequence1:1953327..1954877(-)	partial			WP_001185153.1	phosphoenolpyruvate--protein phosphotransferase	68.6	42.6	32.7
MGA_1723	LOCUS_16980	sequence1:1977655..1978431(-)	partial			WP_151738075.1	outer membrane beta-barrel protein	59.7	82.8	31.5
MGA_1749	LOCUS_17240	sequence1:2007761..2008327(+)	partial			WP_014208073.1	tetratricopeptide repeat protein	94.7	68.6	36.9
MGA_1755	LOCUS_17300	sequence1:2013954..2014223(+)	internal_stop_codon	2014221..2014223(+)		WP_005170245.1	GNAT family N-acetyltransferase	98.9	47.8	45.5
MGA_1772	LOCUS_17460	sequence1:2031733..2032821(-)	partial			WP_004550405.1	lipase	71.5	66.0	29.8
MGA_1777	LOCUS_17510	sequence1:2036212..2036877(-)	partial			WP_015704578.1	hypothetical protein	66.5	67.6	30.5
MGA_1778	LOCUS_17520	sequence1:2036870..2037577(-)	partial			WP_011166241.1	ABC transporter ATP-binding protein	93.2	62.2	29.0
MGA_1786	LOCUS_17590	sequence1:2045157..2045828(-)	frameshift		2045234	WP_001302777.1	SDR family NAD(P)-dependent oxidoreductase	87.4	77.1	55.4
MGA_1788	LOCUS_17610	sequence1:2046290..2048815(-)	partial			WP_001417799.1	filamentous hemagglutinin N-terminal domain-containing protein	92.0	60.5	29.7
MGA_1790	LOCUS_17630	sequence1:2050223..2052181(-)	partial			WP_160029978.1	Ig-like domain-containing protein	33.6	17.9	32.6
MGA_1810	LOCUS_17830	sequence1:2075727..2076119(+)	frameshift		2076363,2076116	WP_001309673.1	LysR family transcriptional regulator	100.0	44.4	56.9
MGA_1811	LOCUS_17840	sequence1:2076172..2076396(+)	frameshift		2076363,2076101	WP_015704467.1	LysR family transcriptional regulator	86.5	21.8	67.2
MGA_1819	LOCUS_17920	sequence1:2086414..2086749(+)	partial			WP_015704647.1	alkene reductase	56.8	17.1	73.0
MGA_1828	LOCUS_18010	sequence1:2094021..2095361(-)	partial			WP_011817345.1	SPOR domain-containing protein	20.2	27.2	50.0
MGA_1912	LOCUS_18840	sequence1:2198726..2199115(+)	partial			WP_000150548.1	PTS mannose transporter subunit IIAB	100.0	39.9	45.7
MGA_1914	LOCUS_18860	sequence1:2199661..2200404(+)	partial			WP_057757224.1	PTS system mannose/fructose/sorbose family transporter subunit IID	95.5	41.9	49.6
MGA_1915	LOCUS_18870	sequence1:2200421..2201278(+)	partial			WP_057757224.1	PTS system mannose/fructose/sorbose family transporter subunit IID	94.4	47.8	47.8
MGA_1931	LOCUS_19030	sequence1:2225360..2225668(+)	partial			WP_002211350.1	cold shock-like protein CspD	70.6	82.8	83.3
MGA_1951	LOCUS_19230	sequence1:2245306..2247363(+)	partial			WP_013098773.1	serine protease	33.3	36.4	31.7
MGA_2001	LOCUS_19720	sequence1:2308163..2309038(+)	partial			WP_001276780.1	rhomboid family intramembrane serine protease	90.4	39.0	36.1
MGA_2007	LOCUS_19780	sequence1:2313648..2316893(-)	partial			WP_046463927.1	autotransporter serine protease	66.1	68.8	40.0
MGA_2016	LOCUS_19870	sequence1:2326473..2326958(-)	internal_stop_codon	2327115..2327117(-)		WP_000817269.1	RNA-guided endonuclease TnpB family protein	97.5	41.8	75.2
MGA_2071	LOCUS_20400	sequence1:2384474..2385640(-)	partial			WP_046051328.1	cell envelope integrity protein TolA	34.0	34.6	50.4
MGA_2095	LOCUS_20640	sequence1:2415458..2416855(+)	partial			WP_013096824.1	S-type pyocin domain-containing protein	44.7	35.0	31.1
MGA_2121	LOCUS_20890	sequence1:2448836..2449039(+)	frameshift,internal_stop_codon	2448827..2448829(+)	2448726,2448719	WP_011071076.1	IS5-like element ISSod6 family transposase	98.5	26.2	54.5
MGA_2137	LOCUS_21050	sequence1:2464758..2465474(-)	partial			WP_005478143.1	DUF523 and DUF1722 domain-containing protein	73.5	56.3	37.4
MGA_2168	LOCUS_21350	sequence1:2498050..2498385(+)	partial			WP_011071273.1	IS982-like element ISSod20 family transposase	100.0	38.0	66.7
MGA_2171	LOCUS_21380	sequence1:2500940..2501503(+)	partial			WP_005167462.1	tRNA-uridine aminocarboxypropyltransferase	95.7	71.9	60.9
MGA_2232	LOCUS_21970	sequence2:70398..71186(+)	partial			WP_116269310.1	tetratricopeptide repeat protein	74.0	45.0	44.3
MGA_2240	LOCUS_22050	sequence2:81649..82938(+)	partial			WP_002232017.1	N-acetylmuramoyl-L-alanine amidase AmiB	96.0	67.0	55.9
MGA_2256	LOCUS_22210	sequence2:98932..99540(-)	partial			WP_002210158.1	OapA family protein	48.5	39.0	53.1
MGA_2265	LOCUS_22300	sequence2:107633..107782(-)	internal_stop_codon	108014..108016(-)		WP_011707296.1	YtfJ family protein	93.9	25.6	56.5
MGA_2302	LOCUS_22670	sequence2:150654..150983(-)	partial			WP_099049969.1	IS3 family transposase	100.0	24.1	61.5
MGA_2309	LOCUS_22740	sequence2:158020..159156(+)	partial			WP_024696519.1	calcium-binding protein	43.1	19.7	33.7
MGA_2335	LOCUS_22990	sequence2:186629..187246(+)	frameshift		187222	WP_001301682.1	integrase arm-type DNA-binding domain-containing protein	96.6	71.3	69.7
MGA_2336	LOCUS_23000	sequence2:187330..187878(+)	frameshift		187222	WP_002209313.1	integrase arm-type DNA-binding domain-containing protein	100.0	43.4	83.5
MGA_2339	LOCUS_23030	sequence2:191772..193379(+)	partial			WP_010970456.1	DNA cytosine methyltransferase	19.1	22.7	52.9
MGA_2348	LOCUS_23120	sequence2:204059..204583(+)	partial			WP_003099330.1	spore coat U domain-containing protein	75.9	43.5	31.9
MGA_2373	LOCUS_23370	sequence2:236686..236916(+)	partial			WP_002354621.1	Hcp family type VI secretion system effector	73.7	35.2	60.7
MGA_2374	LOCUS_23380	sequence2:236922..237290(+)	partial			WP_002209749.1	Hcp family type VI secretion system effector	84.4	54.2	51.5
MGA_2379	LOCUS_23430	sequence2:240752..241183(-)	partial			WP_003421030.1	PTS sugar transporter subunit IIA	72.7	77.6	36.5
MGA_2386	LOCUS_23500	sequence2:248054..248362(-)	internal_stop_codon	248435..248437(-),248054..248056(-)		WP_002209912.1	hypothetical protein	99.0	40.2	26.9
MGA_2404	LOCUS_23680	sequence2:269234..269497(-)	partial			WP_010933129.1	NAD(P)H-dependent oxidoreductase	92.0	42.8	45.0
MGA_2406	LOCUS_23700	sequence2:270551..270907(-)	partial			WP_014626543.1	helix-turn-helix transcriptional regulator	61.9	53.1	36.8
MGA_2410	LOCUS_23740	sequence2:272803..273348(-)	partial			WP_050157227.1	fimbrial protein	74.0	78.9	44.4
MGA_2466	LOCUS_24280	sequence2:338156..338530(+)	partial			WP_004188671.1	DUF4087 domain-containing protein	77.4	63.9	41.7
MGA_2468	LOCUS_24300	sequence2:339133..339462(+)	partial			WP_002211928.1	type VI secretion system tip protein VgrG	68.8	9.6	50.7
MGA_2471	LOCUS_24320	sequence2:342032..343018(+)	partial			WP_152745183.1	N-acetylmuramidase domain-containing protein	97.0	32.3	28.4
MGA_2486	LOCUS_24470	sequence2:358322..358834(+)	partial			WP_000522559.1	DUF3304 domain-containing protein	68.8	58.2	44.4
MGA_2487	LOCUS_24480	sequence2:358991..359503(+)	partial			WP_000522559.1	DUF3304 domain-containing protein	65.9	57.1	46.4
MGA_2489	LOCUS_24500	sequence2:359743..360258(+)	partial			WP_000522559.1	DUF3304 domain-containing protein	66.1	57.1	39.8
MGA_2491	LOCUS_24520	sequence2:360510..361022(+)	partial			WP_000522559.1	DUF3304 domain-containing protein	65.9	57.1	42.9
MGA_2492	LOCUS_24530	sequence2:361015..362931(+)	partial			WP_004536040.1	DUF2235 domain-containing protein	81.2	66.1	23.7
MGA_2494	LOCUS_24550	sequence2:363746..365338(-)	partial			WP_011816738.1	formate hydrogenlyase transcriptional activator FlhA	98.1	73.3	59.4
MGA_2529	LOCUS_24900	sequence2:401851..402117(-)	partial			WP_000579612.1	helix-turn-helix transcriptional regulator	61.4	34.2	50.0
MGA_2534	LOCUS_24950	sequence2:407993..409162(-)	partial			WP_038965458.1	YgcG family protein	47.3	59.8	39.1
MGA_2537	LOCUS_24980	sequence2:411383..412969(+)	partial			WP_011860904.1	glycosylating toxin TcdA	83.5	16.2	24.8
MGA_2538	LOCUS_24990	sequence2:413002..419187(+)	partial			WP_002224905.1	C80 family cysteine peptidase	10.4	7.3	29.4
MGA_2550	LOCUS_25110	sequence2:433119..433778(-)	frameshift		433912	WP_013096629.1	O-acetylserine/cysteine exporter	99.1	71.2	46.1
MGA_2589	LOCUS_25490	sequence2:474277..475338(+)	partial			WP_005176365.1	signal recognition particle-docking protein FtsY	96.6	67.3	79.5
MGA_2631	LOCUS_25910	sequence2:523175..523471(+)	partial			WP_002210098.1	barstar family protein	73.5	77.4	43.1
MGA_2637	LOCUS_25970	sequence2:528207..528788(+)	internal_stop_codon	528786..528788(+)		WP_148335055.1	IS3 family transposase	46.6	27.4	65.6
MGA_2638	LOCUS_25980	sequence2:528819..529163(+)	internal_stop_codon	528786..528788(+)		WP_122974009.1	IS3 family transposase	100.0	25.2	67.5
MGA_2677	LOCUS_26370	sequence2:569151..569414(-)	partial			WP_004552312.1	PAAR domain-containing protein	88.5	44.6	46.8
MGA_2678	LOCUS_26380	sequence2:569427..569795(-)	partial			WP_011269339.1	sel1 repeat family protein	96.7	34.7	40.0
MGA_2683	LOCUS_26410	sequence2:577305..577544(-)	partial			WP_005772263.1	hypothetical protein	69.6	78.5	61.8
MGA_2685	LOCUS_26430	sequence2:580115..580408(+)	partial			WP_073579396.1	S-type pyocin domain-containing protein	99.0	21.3	49.0
MGA_2711	LOCUS_26690	sequence2:605188..605688(-)	frameshift,internal_stop_codon	605724..605726(-),605691..605693(-)	605756	WP_013097379.1	hypothetical protein	100.0	29.6	65.7
MGA_2733	LOCUS_26910	sequence2:630428..631390(+)	partial			WP_002212195.1	inorganic triphosphatase	96.6	72.9	43.8
MGA_2770	LOCUS_27280	sequence2:680188..680793(+)	partial			WP_002211630.1	prepilin peptidase-dependent protein	75.6	73.3	39.5
MGA_2792	LOCUS_27500	sequence2:710476..719607(+)	partial			WP_172625977.1	MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA	6.6	4.0	38.3
MGA_2878	LOCUS_28360	sequence3:44121..44717(-)	partial			WP_000861334.1	peptidylprolyl isomerase	74.7	75.5	84.5
MGA_2906	LOCUS_28640	sequence3:72630..73937(+)	frameshift		73928	WP_001166955.1	SPI-1 type III secretion system effector inositol phosphate phosphatase SopB	82.1	63.3	38.0
MGA_2907	LOCUS_28650	sequence3:73978..74325(+)	frameshift		73928	WP_001166955.1	SPI-1 type III secretion system effector inositol phosphate phosphatase SopB	100.0	20.1	56.5
MGA_2909	LOCUS_28670	sequence3:75781..76119(-)	frameshift		76144,76258	WP_004195510.1	SDR family oxidoreductase	100.0	40.4	69.6
MGA_2910	LOCUS_28680	sequence3:76256..76546(-)	frameshift		76144,76258	WP_004195510.1	SDR family oxidoreductase	89.6	32.5	43.3
MGA_2933	LOCUS_28900	sequence3:101038..102027(+)	partial			WP_013225411.1	serine hydrolase domain-containing protein	85.7	73.2	38.5
MGA_2935	LOCUS_28920	sequence3:103743..104441(-)	partial			WP_002209560.1	biofilm formation regulator HmsP	96.6	34.1	35.8
MGA_2947	LOCUS_29040	sequence3:121246..121494(+)	partial			WP_005175118.1	YceK/YidQ family lipoprotein	98.8	73.2	46.4
MGA_2967	LOCUS_29240	sequence3:147407..148066(+)	partial			WP_011815893.1	PadR family transcriptional regulator	69.9	69.4	49.7
MGA_2978	LOCUS_29350	sequence3:159828..160091(+)	partial			WP_011391145.1	helix-turn-helix transcriptional regulator	74.7	36.1	36.9
MGA_3004	LOCUS_29610	sequence3:186697..187233(-)	internal_stop_codon	186697..186699(-)		WP_005482900.1	arylamine N-acetyltransferase	97.2	64.6	25.9
MGA_3021	LOCUS_29780	sequence3:205310..205672(-)	partial			WP_010895538.1	DUF488 domain-containing protein	95.8	73.2	55.7
MGA_3058	LOCUS_30150	sequence3:253819..254271(-)	frameshift		254243	WP_000279528.1	cellulose biosynthesis protein BcsQ	86.0	51.6	43.4
MGA_3059	LOCUS_30160	sequence3:254229..254555(-)	frameshift		254273	WP_005174891.1	cellulose biosynthesis protein BcsQ	87.0	38.4	48.9
MGA_3076	LOCUS_30320	sequence3:279162..279938(+)	partial			WP_061709398.1	type VI secretion system Vgr family protein	98.8	30.5	43.9
MGA_3078	LOCUS_30340	sequence3:282236..283147(+)	partial			WP_010725091.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	86.8	39.4	34.7
MGA_3083	LOCUS_30370	sequence3:285699..286547(+)	partial			WP_010882798.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	89.4	40.1	31.3
MGA_3086	LOCUS_30390	sequence3:288918..289754(+)	partial			WP_010882798.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	98.9	43.1	31.0
MGA_3091	LOCUS_30430	sequence3:293533..295785(+)	partial			WP_002211936.1	type VI secretion system membrane subunit	99.3	65.5	49.4
MGA_3126	LOCUS_30780	sequence3:335560..336204(+)	partial			WP_015703410.1	fimbria/pilus periplasmic chaperone	73.8	75.4	24.4
MGA_3142	LOCUS_30940	sequence3:354440..355393(-)	partial			WP_052270463.1	glycosyltransferase	48.3	21.7	34.4
MGA_3147	LOCUS_30990	sequence3:359741..359920(-)	partial			WP_015705072.1	cold shock domain-containing protein	86.4	31.9	58.8
MGA_3148	LOCUS_31000	sequence3:359883..360101(-)	frameshift		359909	WP_013097650.1	cold shock domain-containing protein	66.7	30.6	89.6
MGA_3197	LOCUS_31490	sequence3:419918..420334(-)	internal_stop_codon	419918..419920(-)		WP_002208561.1	hypothetical protein	94.2	48.1	31.5
MGA_3207	LOCUS_31590	sequence3:431612..432649(+)	partial			WP_050298773.1	DNA uptake porin HofQ	85.8	68.6	42.1
MGA_3270	LOCUS_32220	sequence4:51919..54834(-)	partial			WP_046463927.1	autotransporter serine protease	71.4	65.5	34.9
MGA_3274	LOCUS_32260	sequence4:59136..59546(+)	partial			WP_013095484.1	molecular chaperone OsmY	98.5	60.0	39.6
MGA_3275	LOCUS_32270	sequence4:59796..60953(+)	partial			WP_011815516.1	patatin family protein	81.3	74.3	64.5
MGA_3295	LOCUS_32470	sequence4:87569..88060(-)	partial			WP_002228151.1	polymer-forming cytoskeletal protein	66.9	48.9	40.4
MGA_3317	LOCUS_32690	sequence4:113968..115371(-)	partial			WP_010966554.1	leucine-rich repeat domain-containing protein	81.4	41.9	26.8
MGA_3357	LOCUS_33090	sequence4:160032..160346(-)	partial			WP_003020672.1	hypothetical protein	73.1	73.4	40.0
MGA_3397	LOCUS_33480	sequence4:207900..208457(-)	internal_stop_codon	208554..208556(-)		WP_011816898.1	outer membrane protein OmpK	100.0	73.0	66.1
MGA_3399	LOCUS_33500	sequence4:210531..210872(-)	partial			WP_005167631.1	lipoprotein	100.0	58.9	46.0
MGA_3407	LOCUS_33580	sequence4:221190..221561(+)	partial			WP_011816895.1	ComEA family DNA-binding protein	74.8	60.0	50.0
MGA_3429	LOCUS_33800	sequence4:244422..245309(-)	partial			WP_002223018.1	LysR family transcriptional regulator CrgA	57.6	54.8	28.2
MGA_3437	LOCUS_33880	sequence4:252372..253220(+)	partial			WP_003111969.1	Fe(3+)-pyochelin receptor FptA	77.3	30.3	70.6
MGA_3438	LOCUS_33890	sequence4:253201..253467(+)	internal_stop_codon	253465..253467(+)		WP_003115085.1	MFS transporter	97.7	21.3	47.7
MGA_3439	LOCUS_33900	sequence4:253474..253716(+)	internal_stop_codon	253714..253716(+),253465..253467(+)		WP_004530090.1	MFS transporter	97.5	18.4	56.4
MGA_3440	LOCUS_33910	sequence4:253738..254031(+)	internal_stop_codon	253714..253716(+),253465..253467(+)		WP_004530090.1	MFS transporter	80.4	18.4	64.1
MGA_3443	LOCUS_33940	sequence4:256854..257534(-)	partial			WP_001025909.1	DNA-binding transcriptional regulator OxyR	71.7	54.5	38.9
MGA_3504	LOCUS_34550	sequence4:315550..315924(+)	partial			WP_003689814.1	prepilin peptidase	71.0	29.4	36.4
MGA_3541	LOCUS_34910	sequence4:357416..357661(+)	internal_stop_codon	357659..357661(+)		WP_005173543.1	IS1182-like element ISYen4 family transposase	100.0	16.6	80.2
MGA_3542	LOCUS_34920	sequence4:357674..358630(+)	frameshift,internal_stop_codon	357659..357661(+)	358594,358855	WP_005173543.1	IS1182-like element ISYen4 family transposase	97.5	62.6	66.1
MGA_3543	LOCUS_34930	sequence4:359402..359632(+)	partial			WP_159229444.1	IS3 family transposase	67.1	12.4	54.9
MGA_3576	LOCUS_35260	sequence5:20335..20508(+)	partial			WP_012066682.1	SDR family NAD(P)-dependent oxidoreductase	86.0	18.6	46.9
MGA_3602	LOCUS_35520	sequence5:55070..55684(+)	partial			WP_002215864.1	DUF1454 family protein	77.9	73.5	40.9
MGA_3610	LOCUS_35600	sequence5:65182..65724(-)	partial			WP_015368936.1	cell-envelope stress modulator CpxP	55.6	58.7	52.0
MGA_3633	LOCUS_35830	sequence5:94211..94498(+)	partial			WP_015703865.1	IS200/IS605 family transposase	98.9	69.1	84.0
MGA_3661	LOCUS_36110	sequence5:121888..122247(-)	frameshift		122248	WP_001272728.1	lipopolysaccharide 3-alpha-galactosyltransferase	99.2	34.9	50.0
MGA_3662	LOCUS_36120	sequence5:122210..122746(-)	frameshift,internal_stop_codon	122762..122764(-)	122248	WP_001272734.1	lipopolysaccharide 3-alpha-galactosyltransferase	88.8	46.7	45.6
MGA_3664	LOCUS_36140	sequence5:123151..123462(+)	internal_stop_codon	123460..123462(+)		WP_011203389.1	glycosyltransferase	100.0	43.3	57.3
MGA_3731	LOCUS_36780	sequence5:202420..203670(-)	partial			WP_010980934.1	iron-regulated protein FrpC	39.7	9.1	44.9
MGA_3738	LOCUS_36850	sequence5:211448..212347(+)	partial			WP_011964539.1	PepSY-associated TM helix domain-containing protein	71.2	56.1	23.3
MGA_3739	LOCUS_36860	sequence5:212344..213249(+)	internal_stop_codon	213247..213249(+)		WP_002208785.1	iron-siderophore ABC transporter substrate-binding protein YiuA	98.7	76.4	47.0
MGA_3865	LOCUS_38110	sequence6:122643..125516(+)	partial			WP_093950382.1	hybrid non-ribosomal peptide synthetase/type I polyketide synthase	97.8	35.2	37.5
MGA_3867	LOCUS_38120	sequence6:126966..128075(+)	frameshift		128063	WP_003112370.1	MFS transporter	95.7	68.8	52.4
MGA_3868	LOCUS_38130	sequence6:128092..128445(+)	frameshift		128063	WP_003112370.1	MFS transporter	92.3	21.8	45.5
MGA_3874	LOCUS_38190	sequence6:134921..135673(-)	partial			WP_011836613.1	nucleoside phosphorylase	64.4	63.2	33.5
MGA_3876	LOCUS_38210	sequence6:136791..137621(-)	partial			WP_001287230.1	class I SAM-dependent methyltransferase	61.2	66.3	38.0
MGA_3900	LOCUS_38450	sequence6:165459..165875(+)	partial			WP_013098393.1	nuclear transport factor 2 family protein	73.9	73.4	38.2
MGA_3909	LOCUS_38540	sequence6:173696..174235(+)	partial			WP_011815372.1	Sec-independent protein translocase protein TatB	93.3	73.9	48.5
MGA_3921	LOCUS_38660	sequence7:495..776(-)	internal_stop_codon	804..806(-)		WP_011071273.1	IS982-like element ISSod20 family transposase	95.7	30.5	52.8
MGA_3922	LOCUS_38670	sequence7:804..1106(-)	internal_stop_codon	804..806(-)		WP_011071273.1	IS982-like element ISSod20 family transposase	100.0	34.2	59.0