{ "type": "genome", "identifier": "GCF_000332315.1", "organism": "Prochlorothrix hollandica PCC 9006 = CALU 1027", "title": "Prochlorothrix hollandica PCC 9006 = CALU 1027", "description": "na", "data type": "Genome sequencing and assembly", "organization": "JGI", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000332315.1", "bioproject": "PRJNA224116", "biosample": "SAMN02261252", "wgs_master": "ANKN00000000.1", "refseq_category": "reference genome", "taxid": "317619", "species_taxid": "1223", "organism_name": "Prochlorothrix hollandica PCC 9006 = CALU 1027", "infraspecific_name": "strain=PCC 9006", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/01/22", "asm_name": "ASM33231v1", "asm_submitter": "JGI", "gbrs_paired_asm": "GCA_000332315.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/332/315/GCF_000332315.1_ASM33231v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5646343", "genome_size_ungapped": "5624343", "gc_percent": "54.500000", "replicon_count": "0", "scaffold_count": "13", "contig_count": "233", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000332315.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "4805", "protein_coding_gene_count": "4558", "non_coding_gene_count": "50", "pubmed_id": "23277585" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-01-22", "dateModified": "2013-01-22", "datePublished": "2013-01-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Prochlorothrix hollandica PCC 9006 = CALU 1027" ], "sample_taxid": [ "317619" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [ "None" ], 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"below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 8.33, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000332315.1", "gtdb_species": "s__Prochlorothrix hollandica", "ani": 100.0, "matched_fragments": 1876, "total_fragments": 1876, "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__PCC-9006;f__Prochlorotrichaceae;g__Prochlorothrix", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.78", "min_intra_species_ani": "99.78", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_001548395.1", "gtdb_species": "s__O-77 sp001548395", "ani": 76.5103, "matched_fragments": 74, "total_fragments": 1876, "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Elainellales;f__Elainellaceae;g__O-77", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.35", "min_intra_species_ani": "95.35", "mean_intra_species_af": 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