{ "type": "genome", "identifier": "GCF_000341125.1", "organism": "Nocardiopsis lucentensis DSM 44048", "title": "Nocardiopsis lucentensis DSM 44048", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Yunnan Institute of Microbiology, Yunnan University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000341125.1", "bioproject": "PRJNA224116", "biosample": "SAMN02472149", "wgs_master": "ANBC00000000.1", "refseq_category": "reference genome", "taxid": "1246460", "species_taxid": "53441", "organism_name": "Nocardiopsis lucentensis DSM 44048", "infraspecific_name": "strain=DSM 44048", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/02/19", "asm_name": "SOAPdenovo v1.06", "asm_submitter": "Yunnan Institute of Microbiology, Yunnan University", "gbrs_paired_asm": "GCA_000341125.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/341/125/GCF_000341125.1_SOAPdenovo_v1.06", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6325274", "genome_size_ungapped": "6325274", "gc_percent": "71.000000", "replicon_count": "0", "scaffold_count": "968", "contig_count": "968", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000341125.1-RS_2024_10_21", "annotation_date": "2024-10-21", "total_gene_count": "6292", "protein_coding_gene_count": "5728", "non_coding_gene_count": "67", "pubmed_id": "23626695" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-02-19", "dateModified": "2013-02-19", "datePublished": "2013-02-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Nocardiopsis lucentensis DSM 44048" ], "sample_taxid": [ "1246460" ], 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"total_fragments": 1666, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardiopsis terrae", "strain": "strain=KCTC 19431", "accession": "GCA_014651695.1", "taxid": 372655, "species_taxid": 372655, "relation_to_type": "type", "validated": true, "ani": 82.9046, "matched_fragments": 987, "total_fragments": 1666, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardiopsis terrae", "strain": "strain=DSM 45157", "accession": "GCA_014874035.1", "taxid": 372655, "species_taxid": 372655, "relation_to_type": "type", "validated": true, "ani": 82.8851, "matched_fragments": 1003, "total_fragments": 1666, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardiopsis ganjiahuensis", "strain": "strain=DSM 45031", "accession": "GCA_000341085.1", "taxid": 239984, "species_taxid": 239984, "relation_to_type": "type", "validated": true, "ani": 82.8773, "matched_fragments": 1045, "total_fragments": 1666, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardiopsis exhalans", "strain": "strain=JCM11759T", "accession": "GCA_024134545.1", "taxid": 163604, "species_taxid": 163604, "relation_to_type": "type", "validated": true, "ani": 82.7478, "matched_fragments": 1050, "total_fragments": 1666, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardiopsis metallicus", "strain": "strain=DSM 44598", "accession": "GCA_014201115.1", "taxid": 179819, "species_taxid": 179819, "relation_to_type": "type", "validated": true, "ani": 82.7155, "matched_fragments": 1068, "total_fragments": 1666, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardiopsis alkaliphila", "strain": "strain=YIM 80379", "accession": "GCA_000341005.1", "taxid": 225762, "species_taxid": 225762, "relation_to_type": "type", "validated": true, "ani": 81.702, "matched_fragments": 804, "total_fragments": 1666, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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