{ "type": "genome", "identifier": "GCF_000342125.1", "organism": "Streptomyces mobaraensis NBRC 13819 = DSM 40847", "title": "Streptomyces mobaraensis NBRC 13819 = DSM 40847", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Jiangxi Normal University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000342125.1", "bioproject": "PRJNA224116", "biosample": "SAMN02470112", "wgs_master": "AORZ00000000.1", "refseq_category": "na", "taxid": "1223523", "species_taxid": "35621", "organism_name": "Streptomyces mobaraensis NBRC 13819 = DSM 40847", "infraspecific_name": "strain=DSM 40847", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/02/27", "asm_name": "S.mobaraensisn 1.0", "asm_submitter": "Jiangxi Normal University", "gbrs_paired_asm": "GCA_000342125.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/342/125/GCF_000342125.1_S.mobaraensisn_1.0", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7477811", "genome_size_ungapped": "7477811", "gc_percent": "73.500000", "replicon_count": "0", "scaffold_count": "266", "contig_count": "266", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000342125.1-RS_2024_03_29", "annotation_date": "2024-03-29", "total_gene_count": "6558", "protein_coding_gene_count": "6314", "non_coding_gene_count": "76", "pubmed_id": "23558536" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-02-27", "dateModified": "2013-02-27", "datePublished": "2013-02-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces mobaraensis NBRC 13819 = DSM 40847" ], "sample_taxid": [ "1223523" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [], "sample_host_location_id": [], "data_size": "2.003 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 9.38, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7477811", "Number of Sequences": "266", "Longest Sequences (bp)": "192822", "N50 (bp)": "47194", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "73.3", "Number of CDSs": "6460", "Average Protein Length": "324.8", "Coding Ratio (%)": "84.2", "Number of rRNAs": "1", "Number of tRNAs": "95", "Number of CRISPRs": "6" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptomyces mobaraensis", "strain": "strain=DSM 40847", "accession": "GCA_000342125.1", "taxid": 35621, "species_taxid": 35621, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2342, "total_fragments": 2356, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptomyces mobaraensis", "strain": "strain=DSM 40847", "accession": "GCA_017916255.1", "taxid": 35621, "species_taxid": 35621, "relation_to_type": "type", "validated": true, "ani": 99.993, "matched_fragments": 2354, "total_fragments": 2356, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptomyces huiliensis", "strain": "strain=SCA2-4", "accession": "GCA_020037025.1", "taxid": 2876027, "species_taxid": 2876027, "relation_to_type": "type", "validated": true, "ani": 92.1976, "matched_fragments": 1768, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces caatingaensis", "strain": "strain=CMAA 1322", "accession": "GCA_001187435.1", "taxid": 1678637, "species_taxid": 1678637, "relation_to_type": "type", "validated": true, 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1384, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces morookaense", "strain": "strain=JCM 4793", "accession": "GCA_014656115.1", "taxid": 1970, "species_taxid": 1970, "relation_to_type": "type", "validated": true, "ani": 83.6282, "matched_fragments": 1367, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces mashuensis", "strain": "strain=JCM 4059", "accession": "GCA_014654785.1", "taxid": 33904, "species_taxid": 33904, "relation_to_type": "type", "validated": true, "ani": 83.5902, "matched_fragments": 1373, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces hiroshimensis", "strain": "strain=JCM 4586", "accession": "GCA_014650335.1", "taxid": 66424, "species_taxid": 66424, "relation_to_type": "type", "validated": true, "ani": 83.5526, "matched_fragments": 1401, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces eurocidicus", "strain": "strain=ATCC 27428", "accession": "GCA_002891295.1", "taxid": 66423, "species_taxid": 66423, "relation_to_type": "type", "validated": true, "ani": 83.4512, "matched_fragments": 1419, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces roseifaciens", "strain": "strain=MBT76", "accession": "GCA_001445655.1", "taxid": 1488406, "species_taxid": 1488406, "relation_to_type": "type", "validated": true, "ani": 83.4319, "matched_fragments": 1437, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces klenkii", "strain": "strain=KCTC 29202", "accession": "GCA_003626645.1", "taxid": 1420899, "species_taxid": 1420899, "relation_to_type": "type", "validated": true, "ani": 83.4305, "matched_fragments": 1414, "total_fragments": 2356, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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