{ "type": "genome", "identifier": "GCF_000367405.1", "organism": "Rickettsia prowazekii str. Breinl", "title": "Rickettsia prowazekii str. Breinl", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Naval Medical Research Center", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000367405.1", "bioproject": "PRJNA224116", "biosample": "SAMN01983876", "wgs_master": "na", "refseq_category": "na", "taxid": "1290428", "species_taxid": "782", "organism_name": "Rickettsia prowazekii str. Breinl", "infraspecific_name": "strain=Breinl", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/04/11", "asm_name": "ASM36740v1", "asm_submitter": "Naval Medical Research Center", "gbrs_paired_asm": "GCA_000367405.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/405/GCF_000367405.1_ASM36740v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1109301", "genome_size_ungapped": "1109301", "gc_percent": "29.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000367405.1-RS_2025_01_08", "annotation_date": "2025-01-08", "total_gene_count": "891", "protein_coding_gene_count": "815", "non_coding_gene_count": "40", "pubmed_id": "23814035" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-04-11", "dateModified": "2013-04-11", "datePublished": "2013-04-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Rickettsia prowazekii str. 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"taxid": 782, "species_taxid": 782, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 369, "total_fragments": 369, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Rickettsia typhi", "strain": "strain=Wilmington", "accession": "GCA_000008045.1", "taxid": 785, "species_taxid": 785, "relation_to_type": "type", "validated": true, "ani": 93.1129, "matched_fragments": 357, "total_fragments": 369, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rickettsia tamurae subsp. buchneri", "strain": "strain=ISO7", "accession": "GCA_000696365.2", "taxid": 1462938, "species_taxid": 334545, "relation_to_type": "type", "validated": true, "ani": 86.77, "matched_fragments": 267, "total_fragments": 369, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rickettsia conorii subsp. raoultii", "strain": "strain=Khabarovsk", "accession": "GCA_000940955.1", "taxid": 369822, "species_taxid": 781, "relation_to_type": 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rickettsia japonica", "strain": "strain=YH", "accession": "GCA_000302635.2", "taxid": 35790, "species_taxid": 35790, "relation_to_type": "suspected-type", "validated": true, "ani": 86.3631, "matched_fragments": 336, "total_fragments": 369, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rickettsia australis", "strain": "strain=Phillips", "accession": "GCA_000273745.1", "taxid": 787, "species_taxid": 787, "relation_to_type": "type", "validated": true, "ani": 86.2574, "matched_fragments": 325, "total_fragments": 369, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rickettsia asembonensis", "strain": "strain=NMRCii", "accession": "GCA_000828125.2", "taxid": 1068590, "species_taxid": 1068590, "relation_to_type": "type", "validated": true, "ani": 86.1003, "matched_fragments": 320, "total_fragments": 369, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { 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