{
    "type": "genome",
    "identifier": "GCF_000367845.1",
    "organism": "Aeromonas diversa CDC 2478-85",
    "title": "Aeromonas diversa CDC 2478-85",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Barcelona",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000367845.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02471398",
        "wgs_master": "APVG00000000.1",
        "refseq_category": "na",
        "taxid": "1268237",
        "species_taxid": "502790",
        "organism_name": "Aeromonas diversa CDC 2478-85",
        "infraspecific_name": "strain=2478-85",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2013/04/19",
        "asm_name": "Adiv1.0",
        "asm_submitter": "University of Barcelona",
        "gbrs_paired_asm": "GCA_000367845.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/367/845/GCF_000367845.1_Adiv1.0",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4026421",
        "genome_size_ungapped": "4026421",
        "gc_percent": "61.500000",
        "replicon_count": "0",
        "scaffold_count": "104",
        "contig_count": "104",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)",
        "annotation_date": "2024-01-24",
        "total_gene_count": "3868",
        "protein_coding_gene_count": "3683",
        "non_coding_gene_count": "75",
        "pubmed_id": "23792745"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2013-04-19",
    "dateModified": "2013-04-19",
    "datePublished": "2013-04-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Aeromonas diversa CDC 2478-85"
        ],
        "sample_taxid": [
            "1268237"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA:New Orleans"
        ],
        "sample_host_location_id": [],
        "data_size": "1.135 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4026421",
        "Number of Sequences": "104",
        "Longest Sequences (bp)": "227398",
        "N50 (bp)": "64780",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "61.7",
        "Number of CDSs": "3735",
        "Average Protein Length": "313.9",
        "Coding Ratio (%)": "87.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "69",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Aeromonas diversa",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Aeromonas diversa",
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                "accession": "GCA_000819805.1",
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                "relation_to_type": "type",
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                "ani": 99.9844,
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                "status": "conclusive"
            },
            {
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            {
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                "relation_to_type": "type",
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                "total_fragments": 1296,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aeromonas simiae",
                "strain": "strain=CIP 107798",
                "accession": "GCA_000820125.1",
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                "relation_to_type": "type",
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                "matched_fragments": 863,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aeromonas taiwanensis",
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                "accession": "GCA_000699185.1",
                "taxid": 633417,
                "species_taxid": 633417,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.8063,
                "matched_fragments": 843,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "organism_name": "Aeromonas sanarellii",
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                "accession": "GCA_000820085.1",
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                "species_taxid": 633415,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 853,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas hydrolytica",
                "strain": "strain=DSWY01",
                "accession": "GCA_021495345.2",
                "taxid": 2493633,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Shewanella jiangmenensis",
                "strain": "strain=JM162201",
                "accession": "GCA_018596335.1",
                "taxid": 2837387,
                "species_taxid": 2837387,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4736,
                "matched_fragments": 138,
                "total_fragments": 1296,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alcanivorax marinus",
                "strain": "strain=R8-12",
                "accession": "GCA_025532125.1",
                "taxid": 1177169,
                "species_taxid": 1177169,
                "relation_to_type": "type",
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                "ani": 76.4342,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas cavernae",
                "strain": "strain=K2W31S-8",
                "accession": "GCA_003595175.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Pseudomonas aeruginosa",
                "strain": "strain=JCM 5962",
                "accession": "GCA_022496575.1",
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                "relation_to_type": "type",
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                "ani": 76.3811,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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}