{ "type": "genome", "identifier": "GCF_000378045.1", "organism": "Marinobacterium rhizophilum DSM 18822", "title": "Marinobacterium rhizophilum DSM 18822", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000378045.1", "bioproject": "PRJNA224116", "biosample": "SAMN02440466", "wgs_master": "ARJM00000000.1", "refseq_category": "reference genome", "taxid": "1122202", "species_taxid": "420402", "organism_name": "Marinobacterium rhizophilum DSM 18822", "infraspecific_name": "strain=DSM 18822", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/04/23", "asm_name": "ASM37804v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000378045.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/378/045/GCF_000378045.1_ASM37804v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5364574", "genome_size_ungapped": "5360582", "gc_percent": "58.500000", "replicon_count": "0", "scaffold_count": "58", "contig_count": "68", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000378045.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4781", "protein_coding_gene_count": "4639", "non_coding_gene_count": "76", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-04-23", "dateModified": "2013-04-23", "datePublished": "2013-04-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Marinobacterium rhizophilum DSM 18822" ], "sample_taxid": [ "1122202" ], "sample_host_organism": [ "Suaeda 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"total_fragments": 1758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas hydrolytica", "strain": "strain=DSWY01", "accession": "GCA_021495345.2", "taxid": 2493633, "species_taxid": 2493633, "relation_to_type": "type", "validated": true, "ani": 76.7542, "matched_fragments": 197, "total_fragments": 1758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas knackmussii", "strain": "strain=B13", "accession": "GCA_000689415.1", "taxid": 65741, "species_taxid": 65741, "relation_to_type": "type", "validated": true, "ani": 76.7302, "matched_fragments": 180, "total_fragments": 1758, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas faucium", "strain": "strain=BML-PP048", "accession": "GCA_021602585.1", "taxid": 2740518, "species_taxid": 2740518, "relation_to_type": "type", "validated": true, "ani": 76.6413, "matched_fragments": 183, "total_fragments": 1758, "ani_threshold": 95, "status": 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