{
    "type": "genome",
    "identifier": "GCF_000381005.1",
    "organism": "Selenomonas bovis DSM 23594",
    "title": "Selenomonas bovis DSM 23594",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000381005.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02440984",
        "wgs_master": "ARLB00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1123250",
        "species_taxid": "416586",
        "organism_name": "Selenomonas bovis DSM 23594",
        "infraspecific_name": "strain=DSM 23594",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2013/04/24",
        "asm_name": "ASM38100v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_000381005.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/005/GCF_000381005.1_ASM38100v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2688760",
        "genome_size_ungapped": "2683735",
        "gc_percent": "59.000000",
        "replicon_count": "0",
        "scaffold_count": "75",
        "contig_count": "82",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000381005.1-RS_2024_04_01",
        "annotation_date": "2024-04-01",
        "total_gene_count": "2603",
        "protein_coding_gene_count": "2494",
        "non_coding_gene_count": "77",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2013-04-24",
    "dateModified": "2013-04-24",
    "datePublished": "2013-04-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Selenomonas bovis DSM 23594"
        ],
        "sample_taxid": [
            "1123250"
        ],
        "sample_host_organism": [
            "Yak"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "0.751 MB",
        "sample_ph_range": {
            "min": 4283.0,
            "max": 4283.0
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2688760",
        "Number of Sequences": "75",
        "Longest Sequences (bp)": "342732",
        "N50 (bp)": "82536",
        "Gap Ratio (%)": "0.186889",
        "GCcontent (%)": "59.2",
        "Number of CDSs": "2489",
        "Average Protein Length": "310.6",
        "Coding Ratio (%)": "86.3",
        "Number of rRNAs": "4",
        "Number of tRNAs": "63",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Mitsuokella multacida",
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                "species_taxid": 52226,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Mitsuokella jalaludinii",
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                "taxid": 187979,
                "species_taxid": 187979,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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            {
                "organism_name": "Selenomonas sputigena",
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                "taxid": 69823,
                "species_taxid": 69823,
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                "status": "below_threshold"
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            {
                "organism_name": "Selenomonas sputigena",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Selenomonas timonae",
                "strain": "strain=Marseille-Q3039",
                "accession": "GCA_014250475.1",
                "taxid": 2754044,
                "species_taxid": 2754044,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Selenomonas felix",
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                "accession": "GCA_900186465.1",
                "taxid": 1944634,
                "species_taxid": 1944634,
                "relation_to_type": "type",
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                "matched_fragments": 158,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Selenomonas infelix",
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                "accession": "GCA_000234095.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
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        ],
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                "accession": "GCF_000381005.1",
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                "matched_fragments": 854,
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                "num_clustered_genomes": 11,
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            {
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            {
                "accession": "GCA_900318215.1",
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                "accession": "GCF_000469545.1",
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        ]
    },
    "_bac2feature": {
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        "bacillus_cell_shape": 0.142,
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    "_genome_taxon": [
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        "23594"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}