{
    "type": "genome",
    "identifier": "GCF_000381125.1",
    "organism": "Caldimonas manganoxidans ATCC BAA-369",
    "title": "Caldimonas manganoxidans ATCC BAA-369",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
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    "properties": {
        "assembly_accession": "GCF_000381125.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02440480",
        "wgs_master": "ARLH00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1265502",
        "species_taxid": "196015",
        "organism_name": "Caldimonas manganoxidans ATCC BAA-369",
        "infraspecific_name": "strain=ATCC BAA-369",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2013/04/24",
        "asm_name": "ASM38112v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_000381125.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/381/125/GCF_000381125.1_ASM38112v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
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        "genome_size_ungapped": "3531816",
        "gc_percent": "66.000000",
        "replicon_count": "0",
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        "contig_count": "92",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000381125.1-RS_2024_09_19",
        "annotation_date": "2024-09-19",
        "total_gene_count": "3464",
        "protein_coding_gene_count": "3320",
        "non_coding_gene_count": "57",
        "pubmed_id": "na"
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    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2013-04-24",
    "dateModified": "2013-04-24",
    "datePublished": "2013-04-24",
    "_annotation": {
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        "sample_organism": [
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        "sample_taxid": [
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
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        "sample_host_location_id": [],
        "data_size": "0.974 MB",
        "sample_ph_range": {
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            "max": null
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        "sample_temperature_range": {
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            "max": null
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        "contamination": 0.0,
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        "genome_count": 1
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    "data_type": "G",
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        "Longest Sequences (bp)": "217125",
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        "GCcontent (%)": "66.0",
        "Number of CDSs": "3282",
        "Average Protein Length": "324.3",
        "Coding Ratio (%)": "90.4",
        "Number of rRNAs": "4",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "2"
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}