{ "type": "genome", "identifier": "GCF_000383255.1", "organism": "Brachyspira hyodysenteriae ATCC 27164", "title": "Brachyspira hyodysenteriae ATCC 27164", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000383255.1", "bioproject": "PRJNA224116", "biosample": "SAMN02441635", "wgs_master": "ARSY00000000.1", "refseq_category": "na", "taxid": "1266923", "species_taxid": "159", "organism_name": "Brachyspira hyodysenteriae ATCC 27164", "infraspecific_name": "strain=B78", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/04/26", "asm_name": "ASM38325v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000383255.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/383/255/GCF_000383255.1_ASM38325v1", 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994, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Brachyspira hyodysenteriae", "strain": "strain=B-78", "accession": "GCA_001676785.2", "taxid": 159, "species_taxid": 159, "relation_to_type": "type", "validated": true, "ani": 99.9892, "matched_fragments": 992, "total_fragments": 994, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Brachyspira hyodysenteriae", "strain": "strain=B78", "accession": "GCA_001013005.1", "taxid": 159, "species_taxid": 159, "relation_to_type": "type", "validated": true, "ani": 99.9751, "matched_fragments": 970, "total_fragments": 994, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Brachyspira suanatina", "strain": "strain=AN4859/03", "accession": "GCA_001049755.1", "taxid": 381802, "species_taxid": 381802, "relation_to_type": "type", "validated": true, "ani": 92.8066, "matched_fragments": 921, "total_fragments": 994, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brachyspira 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760, "total_fragments": 994, "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Brachyspirae;o__Brachyspirales;f__Brachyspiraceae;g__Brachyspira", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.456, "cell_length": 0.738, "doubling_h": 0.477, "growth_tmp": 37.0, "optimum_tmp": 37.4, "optimum_ph": 7.1, "genome_size": 3014451.821, "gc_content": 26.159, "coding_genes": 2590.667, "rRNA16S_genes": 1.0, "tRNA_genes": 33.0, "gram_stain": 0.0, "sporulation": 0.0, "motility": 1.0, "range_salinity": null, "facultative_respiration": 1.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 1.0 }, "_genome_taxon": [ "Brachyspira", "hyodysenteriae", "ATCC", "27164" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }