{
    "type": "genome",
    "identifier": "GCF_000387765.1",
    "organism": "Caldisalinibacter kiritimatiensis",
    "title": "Caldisalinibacter kiritimatiensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Leibniz Institute DSMZ",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000387765.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02470242",
        "wgs_master": "ARZA00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1304284",
        "species_taxid": "1304284",
        "organism_name": "Caldisalinibacter kiritimatiensis",
        "infraspecific_name": "strain=L21-TH-D2",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2013/05/02",
        "asm_name": "L21-THTYG",
        "asm_submitter": "Leibniz Institute DSMZ",
        "gbrs_paired_asm": "GCA_000387765.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/387/765/GCF_000387765.1_L21-THTYG",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2788198",
        "genome_size_ungapped": "2788198",
        "gc_percent": "30.000000",
        "replicon_count": "0",
        "scaffold_count": "289",
        "contig_count": "289",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000387765.1-RS_2024_04_11",
        "annotation_date": "2024-04-11",
        "total_gene_count": "2791",
        "protein_coding_gene_count": "2712",
        "non_coding_gene_count": "60",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2013-05-02",
    "dateModified": "2013-05-02",
    "datePublished": "2013-05-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Caldisalinibacter kiritimatiensis"
        ],
        "sample_taxid": [
            "1304284"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Kiribati: Kiritimati Atoll"
        ],
        "sample_host_location_id": [],
        "data_size": "0.773 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2788198",
        "Number of Sequences": "289",
        "Longest Sequences (bp)": "76555",
        "N50 (bp)": "26200",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "30.1",
        "Number of CDSs": "2636",
        "Average Protein Length": "295.4",
        "Coding Ratio (%)": "83.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Caldisalinibacter kiritimatiensis",
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                "validated": true,
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                "matched_fragments": 797,
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            },
            {
                "organism_name": "Thermohalobacter berrensis",
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                "accession": "GCA_003609645.1",
                "taxid": 99594,
                "species_taxid": 99594,
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                "status": "below_threshold"
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                "status": "below_threshold"
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            {
                "organism_name": "Sporosalibacterium faouarense",
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                "accession": "GCA_016765695.1",
                "taxid": 516123,
                "species_taxid": 516123,
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                "ani": 76.396,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Anaeromonas gelatinilytica",
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                "accession": "GCA_016820635.1",
                "taxid": 2683194,
                "species_taxid": 2683194,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 100,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Senegalia massiliensis",
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                "accession": "GCA_900626135.1",
                "taxid": 1720316,
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                "relation_to_type": "type",
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                "ani": 76.177,
                "matched_fragments": 102,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gottschalkia purinilytica",
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                "species_taxid": 1503,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Romboutsia timonensis",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Tissierella simiarum",
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                "species_taxid": 2841534,
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            },
            {
                "organism_name": "Tissierella pigra",
                "strain": "strain=WCA3-693-APC-4",
                "accession": "GCA_009695605.1",
                "taxid": 2607614,
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 69,
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                "ani_threshold": 95,
                "status": "below_threshold"
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        "gtdb_result": [
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                "accession": "GCF_000387765.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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    "_bac2feature": {
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    "_genome_taxon": [
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        "kiritimatiensis"
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}