{ "type": "genome", "identifier": "GCF_000407285.1", "organism": "Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076", "title": "Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Broad Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000407285.1", "bioproject": "PRJNA224116", "biosample": "SAMN02596896", "wgs_master": "ASWN00000000.1", "refseq_category": "na", "taxid": "1139996", "species_taxid": "41997", "organism_name": "Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076", "infraspecific_name": "strain=ATCC 43076", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/06/04", "asm_name": "Ente_sacc_ATCC43076_V2", "asm_submitter": "Broad Institute", "gbrs_paired_asm": "GCA_000407285.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/407/285/GCF_000407285.1_Ente_sacc_ATCC43076_V2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2604038", "genome_size_ungapped": "2591178", "gc_percent": "37.000000", "replicon_count": "0", "scaffold_count": "2", "contig_count": "5", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000407285.1-RS_2024_05_02", "annotation_date": "2024-05-02", "total_gene_count": "2631", "protein_coding_gene_count": "2518", "non_coding_gene_count": "48", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-06-04", "dateModified": "2013-06-04", "datePublished": "2013-06-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Enterococcus saccharolyticus subsp. saccharolyticus ATCC 43076" ], "sample_taxid": [ "1139996" 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vagococcus allomyrinae", "strain": "strain=BWB3-3", "accession": "GCA_017829975.1", "taxid": 2794353, "species_taxid": 2794353, "relation_to_type": "type", "validated": true, "ani": 77.5364, "matched_fragments": 78, "total_fragments": 867, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tetragenococcus halophilus subsp. halophilus", "strain": "strain=DSM 20339", "accession": "GCA_003841405.1", "taxid": 1513897, "species_taxid": 51669, "relation_to_type": "type", "validated": true, "ani": 77.2357, "matched_fragments": 120, "total_fragments": 867, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tetragenococcus halophilus subsp. flandriensis", "strain": "strain=DSM 23766", "accession": "GCA_002922845.1", "taxid": 1513898, "species_taxid": 51669, "relation_to_type": "type", "validated": true, "ani": 76.6376, "matched_fragments": 130, "total_fragments": 867, 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