{ "type": "genome", "identifier": "GCF_000420485.1", "organism": "Paucidesulfovibrio longus DSM 6739", "title": "Paucidesulfovibrio longus DSM 6739", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000420485.1", "bioproject": "PRJNA224116", "biosample": "SAMN02441247", "wgs_master": "ATVA00000000.1", "refseq_category": "reference genome", "taxid": "1121456", "species_taxid": "889", "organism_name": "Paucidesulfovibrio longus DSM 6739", "infraspecific_name": "strain=DSM 6739", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/07/09", "asm_name": "ASM42048v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000420485.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/420/485/GCF_000420485.1_ASM42048v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3701832", "genome_size_ungapped": "3701822", "gc_percent": "63.500000", "replicon_count": "0", "scaffold_count": "19", "contig_count": "19", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000420485.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "3456", "protein_coding_gene_count": "3387", "non_coding_gene_count": "58", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-07-09", "dateModified": "2013-07-09", "datePublished": "2013-07-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Paucidesulfovibrio longus DSM 6739" ], "sample_taxid": [ "1121456" ], "sample_host_organism": [], 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95, "status": "below_threshold" }, { "organism_name": "Solidesulfovibrio fructosivorans", "strain": "strain=JJ", "accession": "GCA_000179555.1", "taxid": 878, "species_taxid": 878, "relation_to_type": "type", "validated": true, "ani": 77.5814, "matched_fragments": 232, "total_fragments": 1226, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000420485.1", "gtdb_species": "s__Paucidesulfovibrio longus", "ani": 100.0, "matched_fragments": 1225, "total_fragments": 1226, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Paucidesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_900167125.1", 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