# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_32	LOCUS_00320	sequence01:31874..33382(-)	partial			WP_012027720.1	transglutaminase domain-containing protein	64.9	32.2	27.9
MGA_39	LOCUS_00390	sequence01:39033..39287(+)	partial			WP_010922497.1	A24 family peptidase	85.7	34.6	70.8
MGA_84	LOCUS_00840	sequence01:93234..94220(-)	partial			WP_010922532.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	99.1	72.1	86.5
MGA_93	LOCUS_00930	sequence01:102005..102409(-)	partial			WP_011285510.1	LPXTG-anchored collagen-like adhesin Scl2/SclB	76.9	33.1	49.0
MGA_149	LOCUS_01480	sequence01:165775..166011(-)	partial			WP_002985700.1	preprotein translocase subunit SecG	74.4	74.4	87.9
MGA_185	LOCUS_01840	sequence01:197972..198487(-)	partial			WP_001080846.1	helix-turn-helix transcriptional regulator	38.6	46.8	83.3
MGA_194	LOCUS_01930	sequence01:202116..203639(+)	partial			WP_010714140.1	DNA primase family protein	85.8	53.5	38.7
MGA_214	LOCUS_02120	sequence02:8820..9095(+)	partial			WP_011476123.1	prenyltransferase	58.2	17.6	60.4
MGA_249	LOCUS_02470	sequence02:46948..47274(+)	internal_stop_codon	47272..47274(+)		WP_008090262.1	class C sortase	99.1	37.8	78.5
MGA_252	LOCUS_02500	sequence02:50343..53135(+)	partial			WP_017143219.1	VWA domain-containing protein	44.1	37.6	28.6
MGA_276	LOCUS_02740	sequence02:80350..83652(+)	partial			WP_010921811.1	FCT-2 pilus major pilin FctA/T1	14.5	52.1	30.7
MGA_285	LOCUS_02830	sequence02:92391..93485(+)	partial			WP_000823931.1	DNA/RNA non-specific endonuclease	69.5	71.8	63.4
MGA_288	LOCUS_02860	sequence02:94490..94747(+)	frameshift		94600,94739,94558	WP_006146286.1	NUDIX hydrolase	85.9	50.7	46.2
MGA_289	LOCUS_02870	sequence02:94741..94935(+)	frameshift		94600,94739,94564	WP_000350744.1	NUDIX hydrolase	79.7	33.6	58.8
MGA_299	LOCUS_02970	sequence02:105409..106641(+)	partial			WP_010922714.1	M protein	79.8	56.8	27.8
MGA_395	LOCUS_03920	sequence03:32140..32430(-)	partial			WP_002993627.1	ABC transporter ATP-binding protein	99.0	41.7	90.5
MGA_396	LOCUS_03930	sequence03:32354..33010(-)	partial			WP_010922148.1	efflux RND transporter periplasmic adaptor subunit	95.9	49.2	69.9
MGA_402	LOCUS_03990	sequence03:41155..41577(+)	partial			WP_002383106.1	VTT domain-containing protein	98.6	68.3	49.3
MGA_443	LOCUS_04400	sequence03:83403..83579(-)	partial			WP_000048058.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_487	LOCUS_04840	sequence03:135664..136518(-)	partial			WP_000221586.1	DnaD domain-containing protein	30.3	39.1	39.8
MGA_492	LOCUS_04890	sequence03:137495..137743(-)	partial			WP_012775263.1	hypothetical protein	93.9	60.7	43.9
MGA_517	LOCUS_05140	sequence03:161539..161694(+)	internal_stop_codon	161692..161694(+)		WP_002901967.1	GntR family transcriptional regulator	90.2	19.3	67.4
MGA_518	LOCUS_05150	sequence03:161866..162258(+)	internal_stop_codon	161692..161694(+)		WP_004194099.1	GntR family transcriptional regulator	96.9	53.4	44.4
MGA_519	LOCUS_05160	sequence03:162348..>163010(-)	partial			WP_002983521.1	tagatose-bisphosphate aldolase	100.0	67.7	80.5
MGA_585	LOCUS_05810	sequence04:67673..67822(-)	frameshift		67830	WP_002994467.1	Asp23/Gls24 family envelope stress response protein	98.0	29.6	72.9
MGA_586	LOCUS_05820	sequence04:67819..68124(-)	frameshift		67830	WP_002984475.1	Asp23/Gls24 family envelope stress response protein	90.1	50.8	76.9
MGA_587	LOCUS_05830	sequence04:68057..68485(-)	partial			WP_010922368.1	alkaline shock response membrane anchor protein AmaP	93.0	66.0	63.4
MGA_621	LOCUS_06170	sequence04:114651..114926(-)	partial			WP_002989987.1	hypothetical protein	83.5	70.4	60.5
MGA_676	LOCUS_06710	sequence05:14733..14951(-)	frameshift		14959	WP_115283723.1	IS3 family transposase	98.6	15.8	87.3
MGA_677	LOCUS_06720	sequence05:14915..15199(-)	frameshift		15275,14959	WP_115283723.1	IS3 family transposase	85.1	17.8	75.0
MGA_678	LOCUS_06730	sequence05:15255..15572(-)	frameshift		15274,15643	WP_165694720.1	IS3-like element IS861 family transposase	94.3	22.1	68.7
MGA_679	LOCUS_06740	sequence05:15548..15736(-)	partial			WP_081026662.1	IS3 family transposase	98.4	26.1	62.3
MGA_702	LOCUS_06970	sequence05:41957..42244(-)	frameshift,internal_stop_codon	42286..42288(-)	42405	WP_011837716.1	HAD family hydrolase	97.9	44.2	44.2
MGA_711	LOCUS_07060	sequence05:47540..48313(-)	internal_stop_codon	47540..47542(-)		WP_013529345.1	IS1595 family transposase	96.5	82.9	33.8
MGA_745	LOCUS_07400	sequence05:90880..91140(+)	partial			WP_002263406.1	threonine synthase	82.6	14.4	60.6
MGA_777	LOCUS_07700	sequence06:1472..2170(-)	partial			WP_002367673.1	pheromone response LPXTG-anchored adhesin PrgC	87.5	61.1	30.7
MGA_783	LOCUS_07760	sequence06:5515..5973(-)	partial			WP_002983685.1	ComF family protein	100.0	68.8	67.8
MGA_827	LOCUS_08200	sequence06:47993..49387(-)	partial			WP_010922693.1	adhesin Scl1	58.0	69.3	37.7
MGA_873	LOCUS_08660	sequence06:93999..94199(-)	internal_stop_codon	94230..94232(-)		WP_011675009.1	isochorismatase family protein	81.8	32.3	44.4
MGA_874	LOCUS_08670	sequence06:94230..94535(-)	internal_stop_codon	94230..94232(-)		WP_003429214.1	cysteine hydrolase family protein	87.1	52.6	45.1
MGA_880	LOCUS_08730	sequence06:97957..98295(+)	frameshift		98271	WP_000475501.1	FtsK/SpoIIIE domain-containing protein	81.2	20.7	85.7
MGA_881	LOCUS_08740	sequence06:98292..98576(+)	frameshift		98271	WP_000475501.1	FtsK/SpoIIIE domain-containing protein	98.9	21.2	87.1
MGA_882	LOCUS_08750	sequence06:99001..99390(+)	partial			WP_012972428.1	hypothetical protein	71.3	77.3	91.3
MGA_883	LOCUS_08760	sequence06:99380..99526(+)	partial			WP_001074366.1	metallophosphoesterase	81.2	16.0	59.0
MGA_886	LOCUS_08790	sequence06:100701..100868(+)	frameshift		100841	WP_001007697.1	site-specific integrase	85.5	12.5	93.6
MGA_887	LOCUS_08800	sequence06:100915..101823(+)	frameshift		100841	WP_001007697.1	site-specific integrase	96.4	77.2	85.6
MGA_925	LOCUS_09170	sequence07:46887..48308(+)	partial			WP_010922693.1	adhesin Scl1	51.8	66.4	35.7
MGA_964	LOCUS_09550	sequence08:12075..12350(-)	frameshift		12316	WP_000178080.1	hypothetical protein	86.8	44.6	55.7
MGA_965	LOCUS_09560	sequence08:12275..12601(-)	frameshift		12316	WP_000178080.1	hypothetical protein	83.3	52.0	50.0
MGA_989	LOCUS_09800	sequence08:41638..42207(-)	partial			WP_011986620.1	BMC domain-containing protein	47.6	34.0	52.2
MGA_993	LOCUS_09840	sequence08:44013..44663(-)	partial			WP_011986623.1	hypothetical protein	59.3	59.9	30.3
MGA_1005	LOCUS_09960	sequence08:55878..56168(+)	frameshift,internal_stop_codon	56290..56292(+)	56159	WP_088197863.1	IS3-like element ISSag2 family transposase	100.0	26.1	85.4
MGA_1006	LOCUS_09970	sequence08:56204..56983(+)	frameshift		56159	WP_088197863.1	IS3-like element ISSag2 family transposase	99.2	69.8	81.7
MGA_1009	LOCUS_10000	sequence08:58422..60377(+)	partial			WP_127742798.1	class III lanthionine synthetase LanKC	49.9	37.8	26.4
MGA_1013	LOCUS_10020	sequence09:2413..2733(-)	internal_stop_codon	2413..2415(-)		WP_029172398.1	IS200/IS605-like element ISSsu4 family transposase	100.0	68.8	77.4
MGA_1021	LOCUS_10100	sequence09:9548..9931(-)	frameshift		9935	WP_011836981.1	aspartate-semialdehyde dehydrogenase	97.6	34.6	79.8
MGA_1022	LOCUS_10110	sequence09:9921..10436(-)	frameshift		9941,10413	WP_011836981.1	aspartate-semialdehyde dehydrogenase	95.3	45.3	76.1
MGA_1024	LOCUS_10130	sequence09:11122..11358(-)	frameshift,internal_stop_codon	10939..10941(-)	11133	WP_000120562.1	beta-glucoside-specific PTS transporter subunit IIABC	79.5	10.3	44.4
MGA_1051	LOCUS_10400	sequence09:36052..38148(-)	partial			WP_000700513.1	pneumococcal-type histidine triad protein	79.8	51.7	39.9
MGA_1054	LOCUS_10430	sequence09:40586..41041(-)	partial			WP_000754587.1	pneumococcal-type histidine triad protein	80.1	14.8	52.5
MGA_1077	LOCUS_10650	sequence10:5506..5856(+)	frameshift		5847	WP_088197863.1	IS3-like element ISSag2 family transposase	62.9	20.7	77.6
MGA_1078	LOCUS_10660	sequence10:5943..6392(+)	frameshift,internal_stop_codon	6655..6657(+)	6330,6342,5847	WP_088197863.1	IS3-like element ISSag2 family transposase	85.2	34.8	76.6
MGA_1079	LOCUS_10670	sequence10:6418..6654(+)	frameshift,internal_stop_codon	6652..6654(+)	6338	WP_088197863.1	IS3-like element ISSag2 family transposase	100.0	21.2	84.6
MGA_1085	LOCUS_10730	sequence10:10200..10814(-)	frameshift		10837	WP_000122833.1	MobV family relaxase	100.0	48.8	91.7
MGA_1086	LOCUS_10740	sequence10:10832..11053(-)	frameshift		10836,11151	WP_000122833.1	MobV family relaxase	98.6	17.2	91.7
MGA_1087	LOCUS_10750	sequence10:11044..11454(-)	frameshift		10836,11151	WP_000122833.1	MobV family relaxase	76.5	24.9	92.3
MGA_1094	LOCUS_10820	sequence10:15734..16381(+)	internal_stop_codon	16379..16381(+)		WP_000022160.1	site-specific integrase	100.0	56.0	94.4
MGA_1095	LOCUS_10830	sequence10:16739..16888(+)	partial			WP_000022160.1	site-specific integrase	100.0	12.8	93.9
MGA_1099	LOCUS_10870	sequence10:19547..20728(+)	partial			WP_011791573.1	radical SAM protein	42.5	29.3	27.3
MGA_1105	LOCUS_10930	sequence10:24960..25199(-)	partial			WP_012775525.1	DUF5962 family protein	93.7	74.7	55.4
MGA_1113	LOCUS_11010	sequence10:31132..32844(-)	partial			WP_027348389.1	AlwI family type II restriction endonuclease	57.7	49.4	24.1
MGA_1116	LOCUS_11040	sequence10:34266..35117(-)	partial			WP_011705890.1	ImmA/IrrE family metallo-endopeptidase	61.5	48.8	30.7
MGA_1124	LOCUS_11120	sequence10:40202..41371(+)	partial			WP_011074490.1	FtsK/SpoIIIE domain-containing protein	99.5	69.2	44.1
MGA_1137	LOCUS_11250	sequence10:51753..52085(+)	partial			WP_016381870.1	hypothetical protein	90.0	58.9	32.3
MGA_1208	LOCUS_11930	sequence12:12782..13207(-)	frameshift		13395	WP_051188335.1	hypothetical protein	90.8	44.8	38.3
MGA_1210	LOCUS_11950	sequence12:14694..14924(+)	frameshift,internal_stop_codon	14633..14635(+),14693..14695(+)	14896,14623,14522,14601,14938,14559	WP_054278179.1	site-specific integrase	89.5	17.6	80.9
MGA_1240	LOCUS_12250	sequence12:50248..50916(-)	partial			WP_023605339.1	RluA family pseudouridine synthase	99.1	72.6	68.2
MGA_1247	LOCUS_12310	sequence13:5990..6229(-)	internal_stop_codon	6284..6286(-)		WP_012027911.1	MFS transporter	77.2	14.3	54.1
MGA_1250	LOCUS_12340	sequence13:8298..8495(-)	frameshift,internal_stop_codon	8573..8575(-),8648..8650(-)	8677	WP_002922537.1	carbonic anhydrase	83.1	32.7	70.4
MGA_1270	LOCUS_12540	sequence13:29226..29582(-)	partial			WP_011861100.1	plasmid mobilization relaxosome protein MobC	68.6	74.3	28.4
MGA_1287	LOCUS_12710	sequence13:46523..>47709(-)	partial			WP_196792563.1	LPXTG cell wall anchor domain-containing protein	95.4	44.5	67.4
MGA_1288	LOCUS_12720	sequence14:1..1165(+)	partial			WP_196792563.1	LPXTG cell wall anchor domain-containing protein	97.2	44.5	68.0
MGA_1291	LOCUS_12750	sequence14:3137..3436(+)	partial			WP_010922073.1	hypothetical protein	88.9	55.7	47.7
MGA_1293	LOCUS_12770	sequence14:3790..6882(+)	partial			WP_011476607.1	type IV secretory system conjugative DNA transfer family protein	72.7	77.0	38.5
MGA_1323	LOCUS_13060	sequence14:28726..31020(+)	partial			WP_000520455.1	MobP2 family relaxase	48.0	83.0	24.5
MGA_1330	LOCUS_13130	sequence14:40252..42543(+)	partial			WP_001247520.1	GBS Bsp-like repeat-containing protein	22.8	19.8	39.8
MGA_1358	LOCUS_13400	sequence15:29106..29399(+)	partial			WP_162038636.1	IS110 family transposase	83.5	19.8	74.1
MGA_1359	LOCUS_13410	sequence15:29734..29961(-)	frameshift,internal_stop_codon	29661..29663(-)	29766	WP_002994010.1	hypothetical protein	94.7	27.1	71.8
MGA_1364	LOCUS_13460	sequence15:34262..35725(-)	partial			WP_158580290.1	YadA-like family protein	48.3	4.0	42.9
MGA_1380	LOCUS_13610	sequence16:5761..6885(-)	partial			WP_010905388.1	collagen-like protein	45.7	11.7	37.1
MGA_1383	LOCUS_13640	sequence16:9719..13651(-)	partial			WP_011475661.1	tape measure protein	30.7	30.8	24.8
MGA_1393	LOCUS_13740	sequence16:17644..18450(-)	partial			WP_063017182.1	Clp protease ClpP	67.2	43.4	30.9
MGA_1398	LOCUS_13790	sequence16:22211..22516(-)	partial			WP_002286540.1	HNH endonuclease signature motif containing protein	79.2	69.3	51.2
MGA_1404	LOCUS_13850	sequence16:24578..25405(-)	partial			WP_000646942.1	prohibitin family protein	73.8	66.6	25.1
MGA_1436	LOCUS_14160	sequence17:4189..4323(+)	frameshift,internal_stop_codon	4321..4323(+)	4329	WP_000692421.1	homoserine kinase	100.0	15.2	72.7
MGA_1466	LOCUS_14450	sequence18:1..663(+)	partial			WP_002983521.1	tagatose-bisphosphate aldolase	100.0	67.7	80.5
MGA_1471	LOCUS_14500	sequence18:4684..5361(-)	partial			WP_002994282.1	hypothetical protein	74.7	72.9	50.9
MGA_1510	LOCUS_14880	sequence19:18639..18953(+)	partial			WP_002983650.1	DNA-directed RNA polymerase subunit omega	69.2	68.6	94.4
MGA_1539	LOCUS_15150	sequence20:19608..20741(+)	partial			WP_012775646.1	IdeS family IgM protease	88.9	29.1	29.9
MGA_1580	LOCUS_15550	sequence21:29417..29689(-)	frameshift		29742	WP_011836309.1	nucleotidyltransferase family protein	98.9	47.6	60.0
MGA_1581	LOCUS_15560	sequence21:29737..29973(-)	frameshift		29742	WP_002262916.1	nucleotidyltransferase family protein	98.7	41.2	50.6
MGA_1622	LOCUS_15940	sequence23:13057..13377(-)	internal_stop_codon	12988..12990(-),13057..13059(-)		WP_029172398.1	IS200/IS605-like element ISSsu4 family transposase	100.0	68.8	78.3
MGA_1623	LOCUS_15950	sequence23:13396..13830(-)	partial			WP_010922017.1	glycoside hydrolase family 1 protein	75.7	23.0	91.7
MGA_1629	LOCUS_16010	sequence23:20195..21403(-)	partial			WP_041272556.1	recombinase family protein	86.1	66.1	37.3
MGA_1632	LOCUS_16040	sequence23:22129..23598(-)	partial			WP_010922095.1	glucosaminidase domain-containing protein	18.6	22.5	40.7
MGA_1635	LOCUS_16070	sequence23:25891..26835(-)	partial			WP_006738705.1	phage tail spike protein	100.0	32.3	90.1
MGA_1645	LOCUS_16150	sequence24:8308..8577(-)	frameshift		8590	WP_002993558.1	hypothetical protein	98.9	65.7	59.1
MGA_1658	LOCUS_16280	sequence24:22194..22478(+)	frameshift		22469	WP_009880881.1	histidine phosphatase family protein	100.0	45.4	70.2
MGA_1659	LOCUS_16290	sequence24:22484..22807(+)	frameshift		22469	WP_009880881.1	histidine phosphatase family protein	100.0	51.7	78.5
MGA_1683	LOCUS_16510	sequence25:22723..22863(+)	frameshift,internal_stop_codon	22572..22574(+),22999..23001(+)	22854,22700,22836	WP_001093389.1	S8 family serine peptidase	78.3	2.3	75.0
MGA_1684	LOCUS_16520	sequence25:23435..23791(+)	frameshift		23786,23390	WP_088197863.1	IS3-like element ISSag2 family transposase	100.0	32.1	74.6
MGA_1690	LOCUS_16560	sequence26:6753..6914(-)	internal_stop_codon	6753..6755(-)		WP_003130024.1	carboxymuconolactone decarboxylase family protein	94.3	49.0	54.0
MGA_1691	LOCUS_16570	sequence26:7214..7465(-)	partial			WP_000547676.1	MerR family transcriptional regulator	79.5	51.2	66.7
MGA_1694	LOCUS_16600	sequence26:10024..10434(-)	internal_stop_codon	10462..10464(-)		WP_002287286.1	FGGY-family carbohydrate kinase	72.1	17.5	57.1
MGA_1695	LOCUS_16610	sequence26:10462..10722(-)	internal_stop_codon	10462..10464(-),10732..10734(-)		WP_002287286.1	FGGY-family carbohydrate kinase	100.0	15.6	74.4
MGA_1696	LOCUS_16620	sequence26:10732..11091(-)	frameshift,internal_stop_codon	10459..10461(-),10729..10731(-),11242..11244(-)	11064,11292,11070	WP_007051390.1	FGGY-family carbohydrate kinase	98.3	21.4	66.7
MGA_1697	LOCUS_16630	sequence26:11266..11442(-)	frameshift,internal_stop_codon	11242..11244(-)	11088,11292	WP_002287286.1	FGGY-family carbohydrate kinase	81.0	8.5	59.6
MGA_1700	LOCUS_16660	sequence26:12301..12441(-)	frameshift		12466,12500	WP_002360544.1	NADP-dependent malic enzyme	100.0	11.8	71.7
MGA_1704	LOCUS_16700	sequence26:16985..18439(-)	partial			WP_162303169.1	family 43 glycosylhydrolase	67.4	40.5	28.9
MGA_1705	LOCUS_16710	sequence26:18590..19807(+)	partial			WP_011987065.1	helix-turn-helix domain-containing protein	31.4	19.3	33.8
MGA_1709	LOCUS_16730	sequence27:1214..3370(-)	partial			WP_010989532.1	Cna B-type domain-containing protein	51.5	23.2	24.5
MGA_1710	LOCUS_16740	sequence27:3582..3869(-)	frameshift		3912,3999	WP_088197863.1	IS3-like element ISSag2 family transposase	95.8	24.7	74.7
MGA_1711	LOCUS_16750	sequence27:3994..4194(-)	frameshift		3915,3999	WP_088197863.1	IS3-like element ISSag2 family transposase	98.5	17.7	83.1
MGA_1712	LOCUS_16760	sequence27:4262..4843(+)	partial			WP_000122904.1	AraC family transcriptional regulator	89.1	52.1	51.7
MGA_1726	LOCUS_16900	sequence28:429..1151(-)	frameshift		1260	WP_000869695.1	aspartate kinase	99.2	52.7	76.9
MGA_1727	LOCUS_16910	sequence28:1520..1783(-)	frameshift		1522,1260	WP_002262528.1	aspartate kinase	97.7	18.8	62.4
MGA_1733	LOCUS_16970	sequence28:5680..7050(+)	partial			WP_003234692.1	alpha-amylase	93.6	65.3	53.9
MGA_1756	LOCUS_17170	sequence30:1..582(+)	partial			WP_011837563.1	Cna B-type domain-containing protein	73.6	8.8	45.0
MGA_1767	LOCUS_17270	sequence30:14564..14842(+)	frameshift		14830,15023	WP_115283723.1	IS3 family transposase	96.7	19.8	55.1
MGA_1811	LOCUS_17660	sequence34:6578..7033(-)	partial			WP_000122904.1	AraC family transcriptional regulator	91.4	41.8	64.5
MGA_1812	LOCUS_17670	sequence35:1..582(+)	partial			WP_011837563.1	Cna B-type domain-containing protein	73.6	8.8	45.0
MGA_1817	LOCUS_17720	sequence35:6341..6631(+)	frameshift		6616	WP_088197863.1	IS3-like element ISSag2 family transposase	97.9	25.5	86.2
MGA_1827	LOCUS_17790	sequence37:510..1454(+)	partial			WP_023905931.1	Abi family protein	73.9	76.2	32.7
MGA_1829	LOCUS_17810	sequence38:474..1817(-)	partial			WP_010922784.1	YhgE/Pip domain-containing protein	99.6	58.9	59.6
