# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00020	sequence01:2378..3070(+)	partial			WP_000745322.1	CPBP family intramembrane metalloprotease	63.5	54.2	40.4
MGA_21	LOCUS_00210	sequence01:27827..30895(+)	partial			WP_011082715.1	YSIRK signal domain/LPXTG anchor domain surface protein	43.7	12.1	20.8
MGA_48	LOCUS_00470	sequence01:56899..59199(+)	partial			WP_012583909.1	endopeptidase La	76.4	73.6	53.8
MGA_59	LOCUS_00580	sequence01:66469..67104(-)	partial			WP_000413738.1	transcriptional repressor LexA	58.3	61.2	45.7
MGA_76	LOCUS_00750	sequence01:80135..80572(+)	frameshift,internal_stop_codon	79992..79994(+)	80096	WP_001148136.1	SH3 domain-containing protein	65.5	23.1	32.4
MGA_100	LOCUS_00990	sequence01:101864..102178(-)	internal_stop_codon	101864..101866(-)		WP_002262605.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	100.0	49.8	47.6
MGA_108	LOCUS_01070	sequence01:108833..112681(-)	partial			WP_010922617.1	heme-binding protein Shr	64.5	65.4	25.3
MGA_129	LOCUS_01280	sequence01:135660..137504(-)	partial			WP_010989838.1	ATP-dependent DNA helicase DinG	39.7	26.8	30.2
MGA_139	LOCUS_01380	sequence01:148460..149350(-)	partial			WP_010965345.1	3D domain-containing protein	53.0	27.0	32.7
MGA_211	LOCUS_02100	sequence01:224792..225772(-)	frameshift		224809	WP_041272556.1	recombinase family protein	95.7	58.6	53.1
MGA_213	LOCUS_02120	sequence01:226108..227025(-)	frameshift		226113,227044	WP_081586538.1	recombinase family protein	99.7	63.8	51.1
MGA_220	LOCUS_02190	sequence01:231107..231580(-)	frameshift		231121	WP_164920606.1	aspartate/glutamate racemase family protein	95.5	63.7	28.0
MGA_223	LOCUS_02220	sequence01:236013..237977(+)	partial			WP_002222406.1	type III restriction-modification system endonuclease	99.2	65.6	34.1
MGA_238	LOCUS_02370	sequence01:255995..257920(-)	partial			WP_010990137.1	DNA internalization-related competence protein ComEC/Rec2	80.7	68.5	25.0
MGA_255	LOCUS_02540	sequence01:273447..273935(-)	partial			WP_002672271.1	peptide-methionine (R)-S-oxide reductase MsrB	100.0	45.8	58.0
MGA_281	LOCUS_02800	sequence01:297046..297984(+)	partial			WP_001830662.1	FAD-dependent oxidoreductase	100.0	68.7	55.3
MGA_296	LOCUS_02950	sequence01:310658..311449(-)	partial			WP_000728266.1	phosphorylcholine esterase CbpE	84.4	36.1	34.4
MGA_305	LOCUS_03020	sequence02:7943..8257(-)	frameshift		8246	WP_040804636.1	GIY-YIG nuclease family protein	75.0	23.5	60.3
MGA_307	LOCUS_03040	sequence02:8975..9817(-)	partial			WP_003700662.1	DNA polymerase III subunit delta'	63.6	52.4	37.2
MGA_330	LOCUS_03270	sequence02:32729..32983(+)	partial			WP_000431159.1	NifU family protein	58.3	62.8	49.0
MGA_362	LOCUS_03590	sequence02:69663..69926(-)	partial			WP_010947718.1	preprotein translocase subunit YajC	93.1	73.0	44.4
MGA_375	LOCUS_03720	sequence02:82137..83030(+)	partial			WP_011836412.1	low temperature requirement protein A	82.5	66.1	20.5
MGA_386	LOCUS_03830	sequence02:94279..95724(-)	partial			WP_002355000.1	peptidase C39 family protein	34.1	64.3	33.9
MGA_410	LOCUS_04070	sequence02:124696..125064(+)	partial			WP_003722410.1	monovalent cation/H(+) antiporter subunit G	63.1	38.6	41.6
MGA_452	LOCUS_04490	sequence02:169471..170628(-)	frameshift		170848	WP_011837092.1	ATP-binding cassette domain-containing protein	94.8	72.6	38.6
MGA_453	LOCUS_04500	sequence02:170843..171010(-)	frameshift		170857	WP_011837092.1	ATP-binding cassette domain-containing protein	96.4	10.4	54.7
MGA_456	LOCUS_04530	sequence02:173945..175093(-)	partial			WP_010964354.1	pyruvate kinase	73.6	59.7	43.6
MGA_460	LOCUS_04570	sequence02:177344..177898(-)	frameshift		178140	WP_011837330.1	LPXTG cell wall anchor domain-containing protein	100.0	25.5	53.9
MGA_461	LOCUS_04580	sequence02:178105..179388(-)	frameshift		178143	WP_011837330.1	LPXTG cell wall anchor domain-containing protein	90.4	51.4	68.1
MGA_470	LOCUS_04670	sequence02:184104..185585(+)	frameshift		184020	WP_002680024.1	recombinase family protein	96.1	77.0	36.1
MGA_473	LOCUS_04700	sequence02:186842..187513(+)	partial			WP_011241757.1	MobQ family relaxase	93.3	30.2	47.1
MGA_488	LOCUS_04850	sequence02:197163..197915(-)	frameshift		197950	WP_002263157.1	voltage-gated chloride channel family protein	99.6	61.1	38.4
MGA_489	LOCUS_04860	sequence02:197927..198322(-)	frameshift		197938	WP_010905754.1	voltage-gated chloride channel family protein	96.9	31.8	31.2
MGA_529	LOCUS_05260	sequence02:239533..240189(-)	partial			WP_011948771.1	ABC transporter ATP-binding protein	97.2	62.2	44.3
MGA_533	LOCUS_05300	sequence02:243201..248108(-)	partial			WP_226990688.1	leucine-rich repeat protein	40.5	40.3	27.8
MGA_577	LOCUS_05720	sequence02:301327..301722(-)	frameshift		301723,301351,301903	WP_003243055.1	zinc metalloprotease LiaK	94.7	50.0	44.2
MGA_580	LOCUS_05750	sequence02:302387..302725(-)	frameshift,internal_stop_codon	302386..302388(-),302344..302346(-),302834..302836(-)	302184,302854,302767	WP_003242609.1	YydG family radical SAM peptide epimerase	93.8	33.2	41.5
MGA_593	LOCUS_05880	sequence03:6929..8089(-)	partial			WP_012583778.1	glycosyltransferase	97.7	73.1	23.4
MGA_597	LOCUS_05920	sequence03:10330..10713(+)	partial			WP_000163009.1	IS30-like element ISSmi1 family transposase	80.3	24.5	51.0
MGA_598	LOCUS_05930	sequence03:11001..11432(-)	partial			WP_002681291.1	type II CRISPR-associated endonuclease Cas1	100.0	49.0	53.1
MGA_618	LOCUS_06130	sequence03:31356..31718(-)	partial			WP_011861830.1	helix-turn-helix transcriptional regulator	56.7	47.5	39.7
MGA_638	LOCUS_06330	sequence03:58566..59384(+)	partial			WP_011017006.1	sugar phosphate nucleotidyltransferase	88.2	47.0	29.2
MGA_680	LOCUS_06750	sequence03:111346..111672(-)	partial			WP_001830073.1	cell division protein FtsL	82.4	66.9	36.0
MGA_694	LOCUS_06890	sequence03:125122..125523(-)	frameshift		125552	WP_001240806.1	ATP-binding cassette domain-containing protein	89.5	37.6	29.0
MGA_695	LOCUS_06900	sequence03:125547..126077(-)	frameshift		125552	WP_030865419.1	ATP-binding cassette domain-containing protein	97.2	50.1	47.1
MGA_703	LOCUS_06980	sequence03:133203..134024(+)	partial			WP_201626951.1	cyclically-permuted mutarotase family protein	96.0	70.9	37.3
MGA_707	LOCUS_07010	sequence04:3328..3699(-)	partial			WP_011124669.1	histidine phosphatase family protein	74.0	20.1	42.9
MGA_713	LOCUS_07070	sequence04:9246..9797(+)	partial			WP_000798967.1	DUF1450 domain-containing protein	50.8	82.3	48.4
MGA_743	LOCUS_07370	sequence04:35904..36077(-)	partial			WP_000048060.1	30S ribosomal protein S21	75.4	74.1	95.3
MGA_744	LOCUS_07380	sequence04:36319..36504(-)	frameshift		36493	WP_004454365.1	phenylalanine--tRNA ligase beta subunit-related protein	93.4	24.5	52.6
MGA_745	LOCUS_07390	sequence04:36491..36748(-)	frameshift		36994,36867,36492	WP_011948697.1	phenylalanine--tRNA ligase beta subunit-related protein	98.8	35.8	61.9
MGA_791	LOCUS_07850	sequence04:82017..84299(+)	partial			WP_011674291.1	transglycosylase domain-containing protein	86.8	73.7	36.6
MGA_805	LOCUS_07980	sequence05:1148..3172(-)	partial			WP_010905675.1	glycosyltransferase family 39 protein	51.9	70.4	23.6
MGA_810	LOCUS_08030	sequence05:8559..8966(+)	partial			WP_010966688.1	MarR family winged helix-turn-helix transcriptional regulator	73.3	64.5	39.0
MGA_836	LOCUS_08290	sequence05:37906..38505(-)	partial			WP_000610856.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	67.3	74.2	35.6
MGA_837	LOCUS_08300	sequence05:38495..39469(-)	partial			WP_001831275.1	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	91.0	34.0	33.4
MGA_850	LOCUS_08430	sequence05:54715..56910(+)	partial			WP_004398589.1	PBP1A family penicillin-binding protein	88.5	69.9	40.0
MGA_870	LOCUS_08630	sequence05:81250..81960(-)	partial			WP_001829583.1	hypothetical protein	72.0	84.4	29.1
MGA_896	LOCUS_08870	sequence06:28487..29329(-)	partial			WP_010963473.1	ABC transporter ATP-binding protein	70.0	65.1	24.5
MGA_910	LOCUS_09010	sequence06:46134..46649(-)	partial			WP_000551762.1	CtsR family transcriptional regulator	66.7	73.9	57.9
MGA_911	LOCUS_09020	sequence06:47232..47390(-)	frameshift,internal_stop_codon	47229..47231(-)	47546,47387,47615	WP_011861352.1	ClbS/DfsB family four-helix bundle protein	100.0	30.8	49.1
MGA_922	LOCUS_09130	sequence06:58265..58453(-)	frameshift		58291	WP_005787134.1	Imm51 family immunity protein	87.1	41.5	42.6
MGA_946	LOCUS_09350	sequence07:11048..12229(-)	partial			WP_001097917.1	AraC family transcriptional regulator	38.7	38.6	34.2
MGA_957	LOCUS_09460	sequence07:20254..20631(-)	partial			WP_011460983.1	VanZ family protein	75.2	56.8	37.2
MGA_1017	LOCUS_10030	sequence08:22402..22548(-)	frameshift		22547	WP_011860792.1	DEAD/DEAH box helicase family protein	95.8	1.6	82.6
MGA_1022	LOCUS_10080	sequence08:26677..27369(-)	partial			WP_010963464.1	ABC transporter ATP-binding protein	90.0	69.2	41.5
MGA_1029	LOCUS_10150	sequence08:31691..32038(-)	partial			WP_011461193.1	IS110-like element ISDha10 family transposase	80.9	21.5	43.0
MGA_1036	LOCUS_10220	sequence08:36288..36902(-)	partial			WP_011860792.1	DEAD/DEAH box helicase family protein	99.0	7.0	87.7
MGA_1037	LOCUS_10230	sequence08:37295..38815(-)	frameshift		37303	WP_011860792.1	DEAD/DEAH box helicase family protein	99.6	17.3	86.1
MGA_1044	LOCUS_10300	sequence08:45949..46398(-)	frameshift		46400	WP_007789938.1	ATP-binding protein	100.0	18.4	100.0
MGA_1045	LOCUS_10310	sequence08:46302..48377(-)	frameshift		46400	WP_007789938.1	ATP-binding protein	96.2	82.2	92.6
MGA_1049	LOCUS_10350	sequence08:49846..50061(-)	partial			WP_011861358.1	Maff2 family protein	71.8	71.8	100.0
MGA_1053	LOCUS_10390	sequence08:53054..53269(-)	frameshift		53301	WP_011861354.1	PcfB family protein	100.0	44.1	83.1
MGA_1054	LOCUS_10400	sequence08:53296..53538(-)	frameshift		53301	WP_011861354.1	PcfB family protein	98.8	49.1	62.0
MGA_1060	LOCUS_10460	sequence08:59361..65432(-)	partial			WP_011836870.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	89.4	61.8	28.9
MGA_1073	LOCUS_10570	sequence09:7398..9671(+)	partial			WP_011837563.1	Cna B-type domain-containing protein	48.3	23.7	45.2
MGA_1075	LOCUS_10590	sequence09:11479..13845(+)	partial			WP_001044255.1	membrane protein	31.1	54.9	29.0
MGA_1077	LOCUS_10610	sequence09:14344..17472(+)	partial			WP_000713812.1	type VII secretion protein EsaA	38.4	33.3	25.1
MGA_1083	LOCUS_10670	sequence09:24341..26752(+)	partial			WP_009930426.1	DUF2974 domain-containing protein	31.5	61.4	42.4
MGA_1084	LOCUS_10680	sequence09:26919..27155(+)	partial			WP_010974226.1	Ti-type conjugative transfer relaxase TraA	89.7	5.5	50.0
MGA_1086	LOCUS_10690	sequence09:28808..31192(+)	partial			WP_000031236.1	lipase	13.9	23.4	34.1
MGA_1090	LOCUS_10730	sequence09:35783..36457(-)	partial			WP_010922095.1	glucosaminidase domain-containing protein	92.0	56.0	35.3
MGA_1107	LOCUS_10900	sequence09:50601..51455(+)	partial			WP_002294549.1	diacylglycerol kinase family protein	73.9	70.4	27.9
MGA_1119	LOCUS_11020	sequence09:61966..63042(+)	partial			WP_011101284.1	acyltransferase	68.4	68.3	28.3
MGA_1122	LOCUS_11050	sequence09:65225..65794(+)	partial			WP_010886813.1	metallo-endopeptidase IrrE	53.4	30.8	33.3
MGA_1133	LOCUS_11160	sequence10:6145..7062(+)	partial			WP_003547443.1	hypothetical protein	35.1	56.1	37.4
MGA_1141	LOCUS_11240	sequence10:13979..15778(+)	partial			WP_010906178.1	MFS transporter	60.6	81.9	51.2
MGA_1145	LOCUS_11280	sequence10:19521..20102(-)	partial			WP_002262179.1	TlpA disulfide reductase family protein	73.6	75.9	57.0
MGA_1147	LOCUS_11300	sequence10:21664..22623(+)	partial			WP_007052354.1	NlpC/P60 family protein	34.2	46.4	42.2
MGA_1149	LOCUS_11320	sequence10:24081..25085(+)	partial			WP_001044255.1	membrane protein	91.9	72.8	26.6
MGA_1172	LOCUS_11550	sequence10:55824..56036(+)	partial			WP_014206134.1	nuclear transport factor 2 family protein	95.7	27.0	37.7
MGA_1175	LOCUS_11580	sequence10:58323..59909(-)	partial			WP_012027584.1	YSIRK-type signal peptide-containing protein	88.8	62.6	37.6
MGA_1182	LOCUS_11630	sequence11:4010..4573(-)	partial			WP_011459566.1	TlpA disulfide reductase family protein	75.9	70.9	30.8
MGA_1216	LOCUS_11970	sequence11:23954..24844(-)	partial			WP_001829468.1	DNA-processing protein DprA	68.6	70.0	43.3
MGA_1217	LOCUS_11980	sequence11:24867..25910(-)	partial			WP_011101689.1	competence protein CoiA family protein	46.1	43.8	28.0
MGA_1222	LOCUS_12030	sequence11:31196..33082(-)	frameshift		33147	WP_011948591.1	ABC transporter ATP-binding protein/permease	100.0	81.4	37.6
MGA_1223	LOCUS_12040	sequence11:33142..33519(-)	frameshift		33153	WP_011254626.1	ABC transporter ATP-binding protein/permease	99.2	15.9	59.7
MGA_1243	LOCUS_12230	sequence12:1..629(+)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	75.5	11.2	52.4
MGA_1244	LOCUS_12240	sequence12:787..1473(+)	partial			WP_011836393.1	GBS Bsp-like repeat-containing protein	72.4	17.2	42.2
MGA_1246	LOCUS_12260	sequence12:2896..4017(+)	partial			WP_078232918.1	Ltp family lipoprotein	42.9	17.5	44.4
MGA_1281	LOCUS_12580	sequence12:36673..40431(+)	partial			WP_010966554.1	leucine-rich repeat domain-containing protein	33.9	50.9	25.4
MGA_1290	LOCUS_12670	sequence12:49211..52225(+)	partial			WP_004190216.1	Cna B-type domain-containing protein	48.5	77.0	36.5
MGA_1292	LOCUS_12680	sequence13:1..3398(+)	partial			WP_002505516.1	isopeptide-forming domain-containing fimbrial protein	55.6	65.0	23.5
MGA_1307	LOCUS_12830	sequence13:19844..20842(+)	partial			WP_002894257.1	LysM peptidoglycan-binding domain-containing protein	49.1	84.7	51.5
MGA_1309	LOCUS_12840	sequence13:24874..27699(+)	partial			WP_011082831.1	MSCRAMM family adhesin SdrF	75.9	38.5	20.3
MGA_1315	LOCUS_12900	sequence13:33949..34830(+)	internal_stop_codon	34828..34830(+)		WP_011986734.1	peptide MFS transporter	99.0	63.2	40.1
MGA_1316	LOCUS_12910	sequence13:34936..35367(+)	internal_stop_codon	34828..34830(+)		WP_011986662.1	peptide MFS transporter	93.7	28.6	50.0
MGA_1318	LOCUS_12930	sequence13:36028..36828(+)	partial			WP_001832670.1	DUF1444 domain-containing protein	77.4	71.8	36.1
MGA_1385	LOCUS_13580	sequence15:1..3398(+)	partial			WP_002505516.1	isopeptide-forming domain-containing fimbrial protein	55.6	65.0	23.5
MGA_1410	LOCUS_13830	sequence15:26257..26754(+)	partial			WP_001024075.1	two-component system response regulator RR06	77.6	59.0	53.1
MGA_1411	LOCUS_13840	sequence15:26657..26869(+)	partial			WP_000697956.1	response regulator transcription factor VncR	90.0	28.9	57.1
MGA_1419	LOCUS_13920	sequence15:35516..38392(+)	partial			WP_011109529.1	BspA family leucine-rich repeat surface protein	25.9	24.5	29.0
MGA_1427	LOCUS_14000	sequence15:47030..47806(+)	frameshift		47800	WP_002352221.1	cell surface antigen I/II	87.6	18.3	27.9
MGA_1431	LOCUS_14020	sequence16:1869..5228(+)	partial			WP_010922617.1	heme-binding protein Shr	18.9	16.1	28.6
MGA_1450	LOCUS_14210	sequence16:26063..26833(-)	partial			WP_011107326.1	ABC transporter permease	74.6	52.6	23.6
MGA_1451	LOCUS_14220	sequence16:26835..27650(-)	partial			WP_010867543.1	daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein	84.9	74.5	53.6
MGA_1464	LOCUS_14350	sequence16:38736..39566(-)	partial			WP_000022803.1	protein jag	55.1	74.1	44.2
MGA_1490	LOCUS_14600	sequence17:22648..23127(-)	partial			WP_003723588.1	LysM peptidoglycan-binding domain-containing protein	69.8	47.3	34.2
MGA_1493	LOCUS_14630	sequence17:24800..25060(-)	partial			WP_147367085.1	YhdT family protein	55.8	48.5	47.9
MGA_1508	LOCUS_14780	sequence17:39409..40608(-)	partial			WP_010989462.1	class 1 internalin InlA	72.9	36.6	31.4
MGA_1530	LOCUS_14990	sequence18:17078..17401(-)	partial			WP_000918378.1	metalloregulator ArsR/SmtB family transcription factor	86.9	74.4	46.2
MGA_1533	LOCUS_15020	sequence18:21297..21590(+)	partial			WP_001831895.1	DUF1027 domain-containing protein	88.7	68.2	37.5
MGA_1540	LOCUS_15090	sequence18:29137..29376(-)	frameshift		29495	WP_010989662.1	tyrosine-type recombinase/integrase	88.6	17.5	72.9
MGA_1541	LOCUS_15100	sequence18:29490..29762(-)	frameshift		29496,29892,29925	WP_011861907.1	site-specific integrase	98.9	22.6	59.6
MGA_1542	LOCUS_15110	sequence18:29923..30246(-)	frameshift		29931,29892	WP_002287015.1	site-specific integrase	97.2	27.2	45.9
MGA_1544	LOCUS_15130	sequence18:30777..31007(-)	frameshift,internal_stop_codon	31182..31184(-),31080..31082(-)	30716,30797	WP_002387574.1	Rep protein	92.1	26.0	55.6
MGA_1545	LOCUS_15140	sequence18:31553..31732(-)	internal_stop_codon	31553..31555(-)		WP_002381040.1	hypothetical protein	98.3	49.5	53.4
MGA_1548	LOCUS_15170	sequence18:33212..34636(+)	frameshift		34626,33180,33222	WP_027348389.1	AlwI family type II restriction endonuclease	98.1	70.5	77.6
MGA_1549	LOCUS_15180	sequence18:34617..35051(+)	frameshift		34624	WP_027348389.1	AlwI family type II restriction endonuclease	96.5	21.1	89.9
MGA_1550	LOCUS_15190	sequence18:35051..36523(+)	partial			WP_010957062.1	TIR domain-containing protein	60.0	79.6	33.9
MGA_1556	LOCUS_15250	sequence18:41270..41455(+)	partial			WP_002383579.1	site-specific integrase	98.4	15.4	50.0
MGA_1563	LOCUS_15310	sequence19:4489..4971(-)	partial			WP_000818207.1	peptide-methionine (R)-S-oxide reductase MsrB	86.9	44.6	68.3
MGA_1588	LOCUS_15560	sequence19:35127..40430(+)	partial			WP_012775274.1	pneumococcal-type histidine triad protein	27.2	51.6	47.4
MGA_1600	LOCUS_15660	sequence20:9677..11170(+)	partial			WP_000727870.1	phosphorylcholine esterase CbpE	85.1	69.7	41.9
MGA_1602	LOCUS_15680	sequence20:12196..13557(-)	partial			WP_034537005.1	O-antigen ligase family protein	74.2	75.9	22.1
MGA_1666	LOCUS_16300	sequence22:22078..23589(+)	partial			WP_000751576.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	30.0	7.7	34.0
MGA_1688	LOCUS_16500	sequence23:18723..19613(-)	partial			WP_011837107.1	ATP-binding protein	90.2	49.9	23.1
MGA_1691	LOCUS_16510	sequence24:2239..3147(+)	partial			WP_003226718.1	nucleoside triphosphate pyrophosphohydrolase	73.5	45.2	40.3
MGA_1712	LOCUS_16610	sequence30:1..1120(+)	partial			WP_011837107.1	ATP-binding protein	80.1	56.4	25.6