{ "type": "genome", "identifier": "GCF_000425805.1", "organism": "Pseudomonas vranovensis DSM 16006", "title": "Pseudomonas vranovensis DSM 16006", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000425805.1", "bioproject": "PRJNA224116", "biosample": "SAMN02441181", "wgs_master": "AUED00000000.1", "refseq_category": "na", "taxid": "1292031", "species_taxid": "321661", "organism_name": "Pseudomonas vranovensis DSM 16006", "infraspecific_name": "strain=DSM 16006", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/07/11", "asm_name": "ASM42580v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000425805.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/425/805/GCF_000425805.1_ASM42580v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5697807", "genome_size_ungapped": "5696297", "gc_percent": "61.500000", "replicon_count": "0", "scaffold_count": "36", "contig_count": "42", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000425805.1-RS_2024_04_29", "annotation_date": "2024-04-29", "total_gene_count": "5324", "protein_coding_gene_count": "5185", "non_coding_gene_count": "68", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-07-11", "dateModified": "2013-07-11", "datePublished": "2013-07-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas vranovensis DSM 16006" ], "sample_taxid": [ "1292031" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"GCA_001695625.1", "taxid": 1876757, "species_taxid": 1876757, "relation_to_type": "type", "validated": true, "ani": 83.238, "matched_fragments": 989, "total_fragments": 1881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas laurentiana", "strain": "strain=JCM 32154", "accession": "GCA_014648275.1", "taxid": 2364649, "species_taxid": 2364649, "relation_to_type": "type", "validated": true, "ani": 83.2239, "matched_fragments": 1058, "total_fragments": 1881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas kermanshahensis", "strain": "strain=SWRI100", "accession": "GCA_014269205.2", "taxid": 2745482, "species_taxid": 2745482, "relation_to_type": "type", "validated": true, "ani": 83.1156, "matched_fragments": 1161, "total_fragments": 1881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas guariconensis", "strain": "strain=LMG 27394", "accession": "GCA_900102675.1", "taxid": 1288410, 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