{ "type": "genome", "identifier": "GCF_000427905.1", "organism": "Thermocrispum agreste DSM 44070", "title": "Thermocrispum agreste DSM 44070", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000427905.1", "bioproject": "PRJNA224116", "biosample": "SAMN02441562", "wgs_master": "ATYX00000000.1", "refseq_category": "reference genome", "taxid": "1111738", "species_taxid": "37925", "organism_name": "Thermocrispum agreste DSM 44070", "infraspecific_name": "strain=DSM 44070", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/07/15", "asm_name": "ASM42790v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000427905.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/427/905/GCF_000427905.1_ASM42790v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4196086", "genome_size_ungapped": "4195841", "gc_percent": "70.000000", "replicon_count": "0", "scaffold_count": "14", "contig_count": "16", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000427905.1-RS_2024_05_02", "annotation_date": "2024-05-02", "total_gene_count": "3821", "protein_coding_gene_count": "3713", "non_coding_gene_count": "59", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-07-15", "dateModified": "2013-07-15", "datePublished": "2013-07-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Thermocrispum agreste DSM 44070" ], "sample_taxid": [ "1111738" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"GCA_000244975.1", "taxid": 40989, "species_taxid": 40989, "relation_to_type": "type", "validated": true, "ani": 78.8678, "matched_fragments": 471, "total_fragments": 1393, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis australiensis", "strain": "strain=DSM 44671", "accession": "GCA_900119165.1", "taxid": 546364, "species_taxid": 546364, "relation_to_type": "type", "validated": true, "ani": 78.6774, "matched_fragments": 648, "total_fragments": 1393, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix tamanrassetensis", "strain": "strain=CECT 8640", "accession": "GCA_014203665.1", "taxid": 1051531, "species_taxid": 1051531, "relation_to_type": "type", "validated": true, "ani": 78.6749, "matched_fragments": 526, "total_fragments": 1393, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharopolyspora rectivirgula", "strain": "strain=DSM 43747", "accession": "GCA_000497205.1", "taxid": 28042, 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"validated": true, "ani": 78.4393, "matched_fragments": 616, "total_fragments": 1393, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharomonospora amisosensis", "strain": "strain=DSM 45685", "accession": "GCA_011761185.1", "taxid": 1128677, "species_taxid": 1128677, "relation_to_type": "type", "validated": true, "ani": 78.4238, "matched_fragments": 446, "total_fragments": 1393, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kutzneria kofuensis", "strain": "strain=DSM 43851", "accession": "GCA_014203355.1", "taxid": 103725, "species_taxid": 103725, "relation_to_type": "type", "validated": true, "ani": 78.3333, "matched_fragments": 596, "total_fragments": 1393, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kutzneria buriramensis", "strain": "strain=DSM 45791", "accession": "GCA_003387475.1", "taxid": 1045776, "species_taxid": 1045776, "relation_to_type": "type", "validated": true, "ani": 78.2895, 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