{ "type": "genome", "identifier": "GCF_000429145.1", "organism": "Aestuariibacter salexigens DSM 15300", "title": "Aestuariibacter salexigens DSM 15300", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000429145.1", "bioproject": "PRJNA224116", "biosample": "SAMN02441210", "wgs_master": "AUBH00000000.1", "refseq_category": "reference genome", "taxid": "1120953", "species_taxid": "226010", "organism_name": "Aestuariibacter salexigens DSM 15300", "infraspecific_name": "strain=DSM 15300", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/09/05", "asm_name": "ASM42914v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000429145.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/145/GCF_000429145.1_ASM42914v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3783840", "genome_size_ungapped": "3782675", "gc_percent": "48.500000", "replicon_count": "0", "scaffold_count": "22", "contig_count": "23", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000429145.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "3455", "protein_coding_gene_count": "3381", "non_coding_gene_count": "60", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-09-05", "dateModified": "2013-09-05", "datePublished": "2013-09-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Aestuariibacter salexigens DSM 15300" ], "sample_taxid": [ "1120953" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], "sample_host_location_id": [], "data_size": "1.085 MB", "sample_ph_range": { "min": 78.0, "max": 78.0 }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3783840", "Number of Sequences": "22", "Longest Sequences (bp)": "922576", "N50 (bp)": "325861", "Gap Ratio (%)": "0.030789", "GCcontent (%)": "48.5", "Number of CDSs": "3363", "Average Protein Length": "342.0", "Coding Ratio (%)": "91.2", "Number of rRNAs": "4", "Number of tRNAs": "45", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Aestuariibacter salexigens", "strain": "strain=DSM 15300", "accession": "GCA_000429145.1", "taxid": 226010, "species_taxid": 226010, 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