{ "type": "genome", "identifier": "GCF_000429905.1", "organism": "Desulfatibacillum aliphaticivorans DSM 15576", "title": "Desulfatibacillum aliphaticivorans DSM 15576", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000429905.1", "bioproject": "PRJNA224116", "biosample": "SAMN02441551", "wgs_master": "AUCT00000000.1", "refseq_category": "na", "taxid": "1121392", "species_taxid": "218208", "organism_name": "Desulfatibacillum aliphaticivorans DSM 15576", "infraspecific_name": "strain=DSM 15576", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/07/15", "asm_name": "ASM42990v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_000429905.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/429/905/GCF_000429905.1_ASM42990v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6469960", "genome_size_ungapped": "6466389", "gc_percent": "54.500000", "replicon_count": "0", "scaffold_count": "64", "contig_count": "68", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_000429905.1-RS_2024_05_15", "annotation_date": "2024-05-15", "total_gene_count": "5354", "protein_coding_gene_count": "5245", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-07-15", "dateModified": "2013-07-15", "datePublished": "2013-07-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Desulfatibacillum aliphaticivorans DSM 15576" ], "sample_taxid": [ "1121392" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "France" ], "sample_host_location_id": [], "data_size": "1.833 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "6469960", "Number of Sequences": "64", "Longest Sequences (bp)": "487707", "N50 (bp)": "203700", "Gap Ratio (%)": "0.055194", "GCcontent (%)": "54.4", "Number of CDSs": "5301", "Average Protein Length": "349.0", "Coding Ratio (%)": "85.8", "Number of rRNAs": "3", "Number of tRNAs": "51", "Number of CRISPRs": "6" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Desulfatibacillum aliphaticivorans", "strain": "strain=DSM 15576", "accession": "GCA_000429905.1", "taxid": 218208, "species_taxid": 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