{
    "type": "genome",
    "identifier": "GCF_000485945.1",
    "organism": "Franconibacter helveticus 513",
    "title": "Franconibacter helveticus 513",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "OARSA, CFSAN",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000485945.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02364109",
        "wgs_master": "AXDK00000000.1",
        "refseq_category": "na",
        "taxid": "1405120",
        "species_taxid": "357240",
        "organism_name": "Franconibacter helveticus 513",
        "infraspecific_name": "strain=513 (LMG 23732)",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2013/10/29",
        "asm_name": "Ehel513.sqn",
        "asm_submitter": "OARSA, CFSAN",
        "gbrs_paired_asm": "GCA_000485945.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/485/945/GCF_000485945.1_Ehel513.sqn",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4841867",
        "genome_size_ungapped": "4841867",
        "gc_percent": "55.500000",
        "replicon_count": "0",
        "scaffold_count": "377",
        "contig_count": "377",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)",
        "annotation_date": "2024-01-16",
        "total_gene_count": "4887",
        "protein_coding_gene_count": "4644",
        "non_coding_gene_count": "71",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2013-10-29",
    "dateModified": "2013-10-29",
    "datePublished": "2013-10-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Franconibacter helveticus 513"
        ],
        "sample_taxid": [
            "1405120"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Switzerland"
        ],
        "sample_host_location_id": [],
        "data_size": "1.376 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 98.96,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4841867",
        "Number of Sequences": "377",
        "Longest Sequences (bp)": "115664",
        "N50 (bp)": "24526",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.4",
        "Number of CDSs": "4336",
        "Average Protein Length": "299.0",
        "Coding Ratio (%)": "80.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "58",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
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            },
            {
                "organism_name": "Franconibacter daqui",
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                "accession": "GCA_014644275.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "organism_name": "Cronobacter dublinensis subsp. lausannensis",
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                "accession": "GCA_000409365.1",
                "taxid": 413500,
                "species_taxid": 413497,
                "relation_to_type": "type",
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                "ani": 82.8425,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cronobacter universalis",
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                "accession": "GCA_000409325.1",
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                "validated": true,
                "ani": 82.7721,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cronobacter dublinensis subsp. lactaridi",
                "strain": "strain=LMG 23825",
                "accession": "GCA_000409345.1",
                "taxid": 413499,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 82.7617,
                "matched_fragments": 909,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cronobacter universalis",
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                "accession": "GCA_900447325.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Cronobacter dublinensis subsp. dublinensis",
                "strain": "strain=LMG 23823",
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                "status": "below_threshold"
            },
            {
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                "ani": 82.6884,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cronobacter muytjensii",
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                "relation_to_type": "type",
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            },
            {
                "organism_name": "Cronobacter sakazakii",
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                "matched_fragments": 851,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter roggenkampii",
                "strain": "strain=DSM 16690",
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            },
            {
                "organism_name": "Enterobacter wuhouensis",
                "strain": "strain=WCHEW120002",
                "accession": "GCA_004331265.1",
                "taxid": 2529381,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Citrobacter rodentium",
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                "accession": "GCA_021278985.1",
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            {
                "organism_name": "Pseudocitrobacter corydidari",
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                "accession": "GCA_021172065.1",
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                "species_taxid": 2891570,
                "relation_to_type": "type",
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                "accession": "GCF_000463115.2",
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    },
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}