{ "type": "genome", "identifier": "GCF_000495775.1", "organism": "Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896", "title": "Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Indiana University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_000495775.1", "bioproject": "PRJNA224116", "biosample": "SAMN02469914", "wgs_master": "AWGB00000000.1", "refseq_category": "na", "taxid": "1121022", "species_taxid": "347481", "organism_name": "Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896", "infraspecific_name": "strain=DSM 16100", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2013/11/06", "asm_name": "AbenevWGS1.0", "asm_submitter": "Indiana University", "gbrs_paired_asm": "GCA_000495775.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/495/775/GCF_000495775.1_AbenevWGS1.0", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5005544", "genome_size_ungapped": "5005544", "gc_percent": "58.500000", "replicon_count": "0", "scaffold_count": "200", "contig_count": "200", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-02-03", "total_gene_count": "4615", "protein_coding_gene_count": "4485", "non_coding_gene_count": "54", "pubmed_id": "24463524" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2013-11-06", "dateModified": "2013-11-06", "datePublished": "2013-11-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896" ], "sample_taxid": [ "1121022" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Russia" ], "sample_host_location_id": [], "data_size": "1.423 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5005544", "Number of Sequences": "200", "Longest Sequences (bp)": "236590", "N50 (bp)": "80388", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "58.4", "Number of CDSs": "4509", "Average Protein Length": "313.5", "Coding Ratio (%)": "84.7", "Number of rRNAs": "3", "Number of tRNAs": "47", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Asticcacaulis benevestitus", "strain": "strain=DSM 16100", "accession": "GCA_000495775.1", "taxid": 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