{
    "type": "genome",
    "identifier": "GCF_000516535.1",
    "organism": "Pseudoleptotrichia goodfellowii DSM 19756",
    "title": "Pseudoleptotrichia goodfellowii DSM 19756",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000516535.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02597279",
        "wgs_master": "AZXW00000000.1",
        "refseq_category": "na",
        "taxid": "714315",
        "species_taxid": "157692",
        "organism_name": "Pseudoleptotrichia goodfellowii DSM 19756",
        "infraspecific_name": "strain=DSM 19756",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/01/07",
        "asm_name": "ASM51653v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_000516535.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/516/535/GCF_000516535.1_ASM51653v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2281162",
        "genome_size_ungapped": "2280962",
        "gc_percent": "31.500000",
        "replicon_count": "0",
        "scaffold_count": "1",
        "contig_count": "3",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000516535.1-RS_2024_09_10",
        "annotation_date": "2024-09-10",
        "total_gene_count": "2255",
        "protein_coding_gene_count": "2171",
        "non_coding_gene_count": "51",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-01-07",
    "dateModified": "2014-01-07",
    "datePublished": "2014-01-07",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pseudoleptotrichia goodfellowii DSM 19756"
        ],
        "sample_taxid": [
            "714315"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [
            "Opportunistic infection"
        ],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany"
        ],
        "sample_host_location_id": [],
        "data_size": "0.618 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2281162",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "2281162",
        "N50 (bp)": "2281162",
        "Gap Ratio (%)": "0.008811",
        "GCcontent (%)": "31.6",
        "Number of CDSs": "2237",
        "Average Protein Length": "305.9",
        "Coding Ratio (%)": "90.0",
        "Number of rRNAs": "7",
        "Number of tRNAs": "39",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Pseudoleptotrichia goodfellowii",
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                "accession": "GCA_000516535.1",
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                "relation_to_type": "type",
                "validated": true,
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                "total_fragments": 760,
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            },
            {
                "organism_name": "Pseudoleptotrichia goodfellowii",
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                "accession": "GCA_007990505.1",
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                "species_taxid": 157692,
                "relation_to_type": "type",
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                "total_fragments": 760,
                "ani_threshold": 95,
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            },
            {
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "taxid": 157687,
                "species_taxid": 157687,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1848,
                "matched_fragments": 152,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leptotrichia trevisanii",
                "strain": "strain=DSM 22070",
                "accession": "GCA_000482505.1",
                "taxid": 109328,
                "species_taxid": 109328,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1109,
                "matched_fragments": 175,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sebaldella termitidis",
                "strain": "strain=ATCC 33386",
                "accession": "GCA_000024405.1",
                "taxid": 826,
                "species_taxid": 826,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7908,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leptotrichia wadei",
                "strain": "strain=DSM 19758",
                "accession": "GCA_000373345.1",
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                "species_taxid": 157687,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leptotrichia shahii",
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                "accession": "GCA_000373045.1",
                "taxid": 157691,
                "species_taxid": 157691,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Sebaldella termitidis",
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                "accession": "GCA_900456835.1",
                "taxid": 826,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 76.572,
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            }
        ],
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCF_000469505.1",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
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    },
    "_genome_taxon": [
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        "goodfellowii",
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        "19756"
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}