{
    "type": "genome",
    "identifier": "GCF_000520655.1",
    "organism": "Paenibacillus graminis RSA19",
    "title": "Paenibacillus graminis RSA19",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "China Agricultural University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_000520655.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN02597343",
        "wgs_master": "ASSG00000000.1",
        "refseq_category": "na",
        "taxid": "1333858",
        "species_taxid": "189425",
        "organism_name": "Paenibacillus graminis RSA19",
        "infraspecific_name": "strain=RSA19",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2014/01/15",
        "asm_name": "s2",
        "asm_submitter": "China Agricultural University",
        "gbrs_paired_asm": "GCA_000520655.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/520/655/GCF_000520655.1_s2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6986194",
        "genome_size_ungapped": "6986194",
        "gc_percent": "50.500000",
        "replicon_count": "0",
        "scaffold_count": "795",
        "contig_count": "795",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_000520655.1-RS_2024_03_21",
        "annotation_date": "2024-03-21",
        "total_gene_count": "6675",
        "protein_coding_gene_count": "6312",
        "non_coding_gene_count": "67",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2014-01-15",
    "dateModified": "2014-01-15",
    "datePublished": "2014-01-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Paenibacillus graminis RSA19"
        ],
        "sample_taxid": [
            "1333858"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [],
        "sample_host_location_id": [],
        "data_size": "2.009 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 8.33,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6986194",
        "Number of Sequences": "795",
        "Longest Sequences (bp)": "171039",
        "N50 (bp)": "16408",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "50.3",
        "Number of CDSs": "5739",
        "Average Protein Length": "301.7",
        "Coding Ratio (%)": "74.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "56",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Paenibacillus graminis",
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                "species_taxid": 189425,
                "relation_to_type": "type",
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                "matched_fragments": 1933,
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                "status": "inconclusive"
            },
            {
                "organism_name": "Paenibacillus graminis",
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                "species_taxid": 189425,
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                "status": "inconclusive"
            },
            {
                "organism_name": "Paenibacillus azotifigens",
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                "taxid": 2047734,
                "species_taxid": 2047734,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_001546055.1",
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                "species_taxid": 682956,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus jilunlii",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus sonchi",
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                "species_taxid": 373687,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_000316285.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus tianjinensis",
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                "species_taxid": 2810347,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Paenibacillus piscarius",
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus agri",
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                "accession": "GCA_013359945.1",
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                "validated": true,
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                "matched_fragments": 512,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus sinensis",
                "strain": "strain=HN-1",
                "accession": "GCA_019904155.1",
                "taxid": 2834413,
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                "validated": true,
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                "matched_fragments": 403,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus aceti",
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                "accession": "GCA_003614185.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenibacillus aceti",
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                "accession": "GCA_014642755.1",
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                "status": "below_threshold"
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        ],
        "cc_result": {
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        "gtdb_result": [
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                "accession": "GCF_000758705.1",
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                "mean_intra_species_ani": "N/A",
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            },
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "bacillus_cell_shape": 1.0,
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    "_genome_taxon": [
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        "graminis",
        "RSA19"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}