# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00020	sequence1:1189..1992(+)	internal_stop_codon	1054..1056(+)		WP_011182898.1	chromosomal replication initiator protein DnaA	99.3	59.8	42.1
MGA_4	LOCUS_00040	sequence1:3459..3578(+)	internal_stop_codon	3576..3578(+)		WP_138821006.1	DNA topoisomerase IV subunit B	100.0	5.7	82.1
MGA_5	LOCUS_00050	sequence1:3807..5150(+)	internal_stop_codon	5148..5150(+),3576..3578(+)		WP_011166217.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	99.6	69.2	58.2
MGA_6	LOCUS_00060	sequence1:5205..5387(+)	internal_stop_codon	5148..5150(+)		WP_003723769.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	9.3	63.3
MGA_8	LOCUS_00080	sequence1:7874..8260(+)	internal_stop_codon	8258..8260(+)		WP_011166277.1	serine--tRNA ligase	100.0	30.8	40.8
MGA_9	LOCUS_00090	sequence1:8408..8893(+)	internal_stop_codon	8258..8260(+),8891..8893(+)		WP_010880145.1	serine--tRNA ligase	100.0	37.9	63.4
MGA_10	LOCUS_00100	sequence1:8894..9142(+)	internal_stop_codon	8891..8893(+)		WP_002295265.1	serine--tRNA ligase	98.8	19.1	65.4
MGA_15	LOCUS_00150	sequence1:12177..12470(+)	frameshift,internal_stop_codon	12174..12176(+),12468..12470(+)	12064	WP_003020731.1	recombination mediator RecR	99.0	48.0	39.6
MGA_16	LOCUS_00160	sequence1:12598..12783(+)	internal_stop_codon	12781..12783(+)		WP_011166257.1	dTMP kinase	96.7	27.7	57.6
MGA_17	LOCUS_00170	sequence1:12823..13245(+)	internal_stop_codon	12781..12783(+)		WP_011166257.1	dTMP kinase	95.0	61.0	47.4
MGA_18	LOCUS_00180	sequence1:13235..13918(+)	partial			WP_011183571.1	DNA polymerase III subunit delta'	76.7	66.0	31.0
MGA_26	LOCUS_00260	sequence1:19651..19980(+)	frameshift,internal_stop_codon	20050..20052(+),19461..19463(+),19978..19980(+)	19619	WP_011674999.1	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase	100.0	33.4	60.6
MGA_27	LOCUS_00270	sequence1:20190..20423(+)	partial			WP_002386630.1	Sapep family Mn(2+)-dependent dipeptidase	97.4	17.4	49.3
MGA_29	LOCUS_00290	sequence1:21004..21222(+)	internal_stop_codon	20998..21000(+)		WP_000686962.1	dipeptidase	94.4	15.3	44.1
MGA_34	LOCUS_00340	sequence1:24008..24934(+)	partial			WP_011182916.1	ABC transporter ATP-binding protein	90.3	46.2	70.6
MGA_37	LOCUS_00370	sequence1:27088..27348(+)	internal_stop_codon	27346..27348(+)		WP_011166775.1	ABC transporter permease	98.8	5.7	40.0
MGA_38	LOCUS_00380	sequence1:27430..27675(+)	internal_stop_codon	27346..27348(+),27673..27675(+)		WP_011183300.1	ABC transporter permease	93.8	5.4	40.8
MGA_40	LOCUS_00400	sequence1:28753..29202(+)	internal_stop_codon	29200..29202(+),29320..29322(+)		WP_011166775.1	ABC transporter permease	94.6	10.9	27.8
MGA_42	LOCUS_00420	sequence1:30001..30276(+)	frameshift,internal_stop_codon	29977..29979(+),30094..30096(+),30100..30102(+),30317..30319(+)	30226,30036,30117	WP_011166279.1	tRNA dihydrouridine synthase DusB	96.7	26.5	45.5
MGA_44	LOCUS_00440	sequence1:30563..31516(+)	internal_stop_codon	31514..31516(+),31523..31525(+),31568..31570(+)		WP_011182927.1	lysine--tRNA ligase	100.0	63.5	56.0
MGA_45	LOCUS_00450	sequence1:31577..32065(+)	internal_stop_codon	31514..31516(+),31523..31525(+),31568..31570(+)		WP_011166280.1	lysine--tRNA ligase	98.8	32.0	67.5
MGA_48	LOCUS_00480	sequence1:32629..33027(+)	partial			WP_002212256.1	aspartate--ammonia ligase	86.4	37.3	30.9
MGA_49	LOCUS_00490	sequence1:33081..33635(+)	frameshift		33632	WP_000288284.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	94.6	76.5	34.5
MGA_50	LOCUS_00500	sequence1:33890..34276(+)	partial			WP_011182977.1	30S ribosomal protein S6	100.0	43.8	43.0
MGA_51	LOCUS_00510	sequence1:34363..34509(+)	internal_stop_codon	34507..34509(+)		WP_011166237.1	single-stranded DNA-binding protein	97.9	33.6	53.1
MGA_52	LOCUS_00520	sequence1:34528..34818(+)	internal_stop_codon	34507..34509(+)		WP_003721668.1	single-stranded DNA-binding protein	94.8	59.6	36.8
MGA_54	LOCUS_00540	sequence1:35592..35966(+)	frameshift,internal_stop_codon	36174..36176(+),35964..35966(+),36177..36179(+),36129..36131(+),35967..35969(+)	35599	WP_011183548.1	dicarboxylate/amino acid:cation symporter	100.0	21.4	45.7
MGA_56	LOCUS_00560	sequence1:36366..36839(+)	frameshift,internal_stop_codon	36174..36176(+),36129..36131(+),36177..36179(+)	36251,36359	WP_011167161.1	dicarboxylate/amino acid:cation symporter	60.5	17.4	48.4
MGA_57	LOCUS_00570	sequence1:37024..37323(+)	frameshift		36961,36930	WP_003439500.1	FAD-dependent oxidoreductase	81.8	14.9	37.0
MGA_66	LOCUS_00660	sequence1:42140..42493(+)	internal_stop_codon	42491..42493(+)		WP_000583238.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	94.0	35.4	53.6
MGA_71	LOCUS_00710	sequence1:44558..44998(+)	internal_stop_codon	44996..44998(+)		WP_011183530.1	peptide chain release factor 1	99.3	39.9	54.5
MGA_72	LOCUS_00720	sequence1:45008..45634(+)	internal_stop_codon	44996..44998(+)		WP_011183530.1	peptide chain release factor 1	99.0	56.7	71.4
MGA_74	LOCUS_00740	sequence1:45856..46329(+)	internal_stop_codon	45802..45804(+),46327..46329(+)		WP_003227647.1	peptide chain release factor N(5)-glutamine methyltransferase	99.4	54.2	46.2
MGA_89	LOCUS_00890	sequence1:57312..57563(+)	frameshift,internal_stop_codon	57615..57617(+),57561..57563(+),57679..57681(+),57570..57572(+)	57699,57635	WP_004082660.1	ABC transporter permease	100.0	24.1	47.0
MGA_90	LOCUS_00900	sequence1:57759..58166(+)	internal_stop_codon	58176..58178(+),58164..58166(+),57561..57563(+),57615..57617(+),57693..57695(+),57570..57572(+)		WP_011166220.1	ABC transporter permease	98.5	15.3	48.1
MGA_92	LOCUS_00920	sequence1:59227..59922(+)	internal_stop_codon	59989..59991(+),59920..59922(+),60004..60006(+)		WP_011166219.1	ABC transporter permease	94.4	72.9	44.3
MGA_94	LOCUS_00940	sequence1:61336..63438(+)	internal_stop_codon	61051..61053(+),63436..63438(+),61141..61143(+),61300..61302(+)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	96.6	52.1	60.4
MGA_95	LOCUS_00950	sequence1:63667..64827(+)	internal_stop_codon	63436..63438(+)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	93.5	29.2	71.4
MGA_96	LOCUS_00960	sequence1:65036..65680(+)	frameshift,internal_stop_codon	65678..65680(+),64918..64920(+)	65052	WP_011167153.1	DNA-directed RNA polymerase subunit beta'	96.3	16.5	56.2
MGA_97	LOCUS_00970	sequence1:65681..66199(+)	internal_stop_codon	66197..66199(+),65678..65680(+)		WP_011183495.1	DNA-directed RNA polymerase subunit beta'	100.0	13.7	82.6
MGA_98	LOCUS_00980	sequence1:66203..66829(+)	internal_stop_codon	66827..66829(+),67115..67117(+),66197..66199(+)		WP_011183495.1	DNA-directed RNA polymerase subunit beta'	88.0	14.6	71.0
MGA_99	LOCUS_00990	sequence1:66917..67117(+)	internal_stop_codon	67115..67117(+),66827..66829(+)		WP_011167153.1	DNA-directed RNA polymerase subunit beta'	100.0	5.3	62.1
MGA_100	LOCUS_01000	sequence1:67190..68599(+)	internal_stop_codon	67115..67117(+)		WP_011167153.1	DNA-directed RNA polymerase subunit beta'	100.0	37.5	65.4
MGA_101	LOCUS_01010	sequence1:68957..69220(+)	internal_stop_codon	68849..68851(+)		WP_011183521.1	30S ribosomal protein S12	96.6	61.3	92.9
MGA_102	LOCUS_01020	sequence1:69265..69570(+)	internal_stop_codon	69568..69570(+)		WP_011166360.1	30S ribosomal protein S7	100.0	65.2	80.2
MGA_103	LOCUS_01030	sequence1:69607..69729(+)	internal_stop_codon	69568..69570(+)		WP_001137495.1	30S ribosomal protein S7	100.0	25.6	85.0
MGA_104	LOCUS_01040	sequence1:69767..69922(+)	internal_stop_codon	70124..70126(+),69980..69982(+),69920..69922(+)		WP_011166361.1	elongation factor G	100.0	7.4	96.1
MGA_105	LOCUS_01050	sequence1:69989..70126(+)	internal_stop_codon	70124..70126(+),69980..69982(+),69920..69922(+)		WP_000090364.1	elongation factor G	97.8	6.4	97.7
MGA_106	LOCUS_01060	sequence1:70175..71080(+)	internal_stop_codon	71078..71080(+),69980..69982(+),69920..69922(+),71288..71290(+),70124..70126(+)		WP_011183519.1	elongation factor G	100.0	43.7	71.8
MGA_107	LOCUS_01070	sequence1:71117..71290(+)	internal_stop_codon	71078..71080(+),71288..71290(+)		WP_010874584.1	elongation factor G	100.0	8.3	82.5
MGA_108	LOCUS_01080	sequence1:71330..71851(+)	internal_stop_codon	71078..71080(+),71288..71290(+)		WP_011183519.1	elongation factor G	97.1	24.4	69.6
MGA_109	LOCUS_01090	sequence1:71958..72512(+)	internal_stop_codon	72510..72512(+)		WP_011183518.1	elongation factor Tu	98.9	46.2	83.0
MGA_110	LOCUS_01100	sequence1:72525..73142(+)	internal_stop_codon	72510..72512(+)		WP_001040568.1	elongation factor Tu	100.0	52.0	78.0
MGA_111	LOCUS_01110	sequence1:73447..73956(+)	internal_stop_codon	73954..73956(+)		WP_002898080.1	LemA family protein	87.0	78.3	34.5
MGA_113	LOCUS_01130	sequence1:75928..76230(+)	internal_stop_codon	75835..75837(+),75901..75903(+),76228..76230(+)		WP_011166679.1	class I mannose-6-phosphate isomerase	100.0	32.7	58.4
MGA_114	LOCUS_01140	sequence1:76330..76557(+)	internal_stop_codon	76228..76230(+)		WP_012027535.1	mannose-6-phosphate isomerase, class I	93.3	24.3	44.7
MGA_115	LOCUS_01150	sequence1:76803..77069(+)	internal_stop_codon	77067..77069(+)		WP_005478378.1	fructose-specific PTS transporter subunit EIIC	100.0	14.1	40.9
MGA_116	LOCUS_01160	sequence1:77076..77804(+)	internal_stop_codon	77067..77069(+)		WP_011705322.1	fructose-specific PTS transporter subunit EIIC	91.3	34.5	38.8
MGA_117	LOCUS_01170	sequence1:77925..78134(+)	internal_stop_codon	78132..78134(+),78267..78269(+),78264..78266(+),78282..78284(+)		WP_005478109.1	fructose-specific PTS transporter subunit EIIC	100.0	9.8	52.2
MGA_118	LOCUS_01180	sequence1:78348..78494(+)	internal_stop_codon	78132..78134(+),78492..78494(+),78264..78266(+),78282..78284(+),78267..78269(+)		WP_005478109.1	fructose-specific PTS transporter subunit EIIC	100.0	7.6	72.9
MGA_119	LOCUS_01190	sequence1:78531..78758(+)	internal_stop_codon	78492..78494(+)		WP_011705322.1	fructose-specific PTS transporter subunit EIIC	88.0	10.4	48.5
MGA_123	LOCUS_01230	sequence1:79592..82552(+)	partial			WP_010989651.1	dihydrolipoyllysine-residue acetyltransferase	23.3	42.1	34.8
MGA_124	LOCUS_01240	sequence1:82646..83110(-)	partial			WP_164919770.1	YigZ family protein	87.7	72.6	35.0
MGA_129	LOCUS_01290	sequence1:86123..86290(+)	internal_stop_codon	86321..86323(+),86105..86107(+),86288..86290(+),86060..86062(+),86084..86086(+),85970..85972(+)		WP_003130958.1	DUF402 domain-containing protein	96.4	30.1	56.6
MGA_137	LOCUS_01370	sequence1:91923..92216(+)	frameshift,internal_stop_codon	91848..91850(+),91718..91720(+)	91762,92204,92278,92220	WP_001253339.1	DUF871 domain-containing protein	91.8	24.0	33.7
MGA_139	LOCUS_01390	sequence1:93812..94141(+)	internal_stop_codon	93785..93787(+)		WP_011167044.1	F0F1 ATP synthase subunit A	83.5	31.4	64.8
MGA_140	LOCUS_01400	sequence1:94478..94726(+)	partial			WP_011183007.1	ATP synthase subunit C	90.2	71.2	56.8
MGA_143	LOCUS_01430	sequence1:95900..96646(+)	internal_stop_codon	96644..96646(+)		WP_011183010.1	F0F1 ATP synthase subunit alpha	100.0	47.2	74.2
MGA_144	LOCUS_01440	sequence1:96647..97240(+)	internal_stop_codon	97238..97240(+),96644..96646(+),97451..97453(+)		WP_011183010.1	F0F1 ATP synthase subunit alpha	100.0	37.5	75.6
MGA_157	LOCUS_01570	sequence1:104229..104516(+)	internal_stop_codon	104514..104516(+)		WP_010890755.1	Cof-type HAD-IIB family hydrolase	94.7	31.4	41.1
MGA_159	LOCUS_01590	sequence1:104889..105071(+)	partial			WP_000278836.1	Cof-type HAD-IIB family hydrolase	90.0	19.8	40.7
MGA_162	LOCUS_01620	sequence1:106005..106301(+)	partial			WP_011182965.1	preprotein translocase subunit SecG	67.3	75.0	66.7
MGA_163	LOCUS_01630	sequence1:106366..107745(+)	internal_stop_codon	107743..107745(+)		WP_011167012.1	ribonuclease R	100.0	64.8	38.0
MGA_164	LOCUS_01640	sequence1:107746..108480(+)	internal_stop_codon	107743..107745(+)		WP_000391086.1	ribonuclease R	99.6	30.1	47.3
MGA_166	LOCUS_01660	sequence1:109344..109769(+)	frameshift		109321	WP_003721367.1	NCS2 family permease	74.5	24.6	48.1
MGA_167	LOCUS_01670	sequence1:110223..110408(+)	frameshift,internal_stop_codon	110407..110409(+),110017..110019(+)	110541,110190	WP_011183312.1	NCS2 family permease	98.4	11.8	43.3
MGA_171	LOCUS_01710	sequence1:113001..113258(+)	partial			WP_002797817.1	CRISPR-associated endonuclease Cas2	92.9	53.8	36.7
MGA_172	LOCUS_01720	sequence1:113865..114539(+)	internal_stop_codon	114537..114539(+)		WP_002456033.1	zinc-dependent alcohol dehydrogenase family protein	98.2	65.4	38.3
MGA_173	LOCUS_01730	sequence1:114757..115251(+)	internal_stop_codon	115249..115251(+)		WP_011183134.1	signal recognition particle-docking protein FtsY	97.6	42.2	48.8
MGA_174	LOCUS_01740	sequence1:115276..115743(+)	internal_stop_codon	115249..115251(+)		WP_000007656.1	signal recognition particle-docking protein FtsY	92.9	43.8	65.3
MGA_176	LOCUS_01760	sequence1:116074..116553(+)	internal_stop_codon	116551..116553(+)		WP_020862745.1	TIGR00282 family metallophosphoesterase	100.0	62.3	56.9
MGA_177	LOCUS_01770	sequence1:116581..116871(+)	internal_stop_codon	116551..116553(+)		WP_003245138.1	2',3'-cyclic-nucleotide 2'-phosphodiesterase	94.8	33.7	52.7
MGA_182	LOCUS_01820	sequence1:119358..119627(+)	internal_stop_codon	119625..119627(+)		WP_011166676.1	methionine adenosyltransferase	95.5	22.0	72.9
MGA_183	LOCUS_01830	sequence1:119679..120512(+)	internal_stop_codon	119625..119627(+)		WP_011166676.1	methionine adenosyltransferase	96.4	68.5	68.9
MGA_184	LOCUS_01840	sequence1:120561..120884(+)	internal_stop_codon	120948..120950(+),120882..120884(+)		WP_011166968.1	HAD family hydrolase	95.3	36.6	38.1
MGA_186	LOCUS_01860	sequence1:121486..121824(-)	internal_stop_codon	121486..121488(-),121837..121839(-),122035..122037(-)		WP_004451047.1	sulfite exporter TauE/SafE family protein	94.6	32.5	56.6
MGA_189	LOCUS_01890	sequence1:123264..123470(+)	internal_stop_codon	123468..123470(+)		WP_011183409.1	ABC transporter ATP-binding protein	100.0	19.4	76.5
MGA_190	LOCUS_01900	sequence1:123537..123956(+)	internal_stop_codon	124182..124184(+),123468..123470(+),123954..123956(+)		WP_011166424.1	spermidine/putrescine ABC transporter ATP-binding protein	99.3	39.3	67.4
MGA_192	LOCUS_01920	sequence1:124817..125023(+)	internal_stop_codon	124784..124786(+),124808..124810(+),125252..125254(+),125021..125023(+)		WP_011166425.1	ABC transporter permease	100.0	20.6	54.4
MGA_193	LOCUS_01930	sequence1:125081..125254(+)	internal_stop_codon	124808..124810(+),125252..125254(+),125021..125023(+)		WP_011183408.1	ABC transporter permease	66.7	11.5	60.5
MGA_195	LOCUS_01950	sequence1:125490..125810(+)	internal_stop_codon	125808..125810(+),125424..125426(+),126030..126032(+),126021..126023(+)		WP_011166426.1	extracellular solute-binding protein	100.0	10.2	63.2
MGA_196	LOCUS_01960	sequence1:125871..126023(+)	internal_stop_codon	125808..125810(+),126030..126032(+),126021..126023(+)		WP_011183407.1	ABC transporter permease subunit	72.0	3.3	75.0
MGA_198	LOCUS_01980	sequence1:126507..127076(+)	internal_stop_codon	127074..127076(+),126435..126437(+),127164..127166(+)		WP_011166426.1	extracellular solute-binding protein	92.6	14.2	34.1
MGA_199	LOCUS_01990	sequence1:127224..127901(+)	internal_stop_codon	127164..127166(+)		WP_011183407.1	ABC transporter permease subunit	94.2	20.6	29.7
MGA_204	LOCUS_02040	sequence1:131027..131410(+)	frameshift,internal_stop_codon	130783..130785(+),130882..130884(+),130867..130869(+)	130971,130815	WP_020862472.1	MBL fold metallo-hydrolase	86.6	16.9	39.3
MGA_206	LOCUS_02060	sequence1:132409..133140(+)	partial			WP_011183265.1	hypothetical protein	88.9	46.8	32.0
MGA_207	LOCUS_02070	sequence1:133264..133929(+)	partial			WP_011183265.1	hypothetical protein	33.5	15.5	40.5
MGA_210	LOCUS_02100	sequence1:134956..135324(+)	frameshift		135288,135334	WP_041272642.1	threonine ammonia-lyase	91.0	27.5	51.4
MGA_211	LOCUS_02110	sequence1:135330..135737(+)	frameshift,internal_stop_codon	135750..135752(+)	135334,135725,135294	WP_004083156.1	threonine ammonia-lyase	97.0	32.7	44.3
MGA_213	LOCUS_02130	sequence1:136520..136771(+)	frameshift,internal_stop_codon	136779..136781(+),136818..136820(+)	136762	WP_005790561.1	anaerobic ribonucleoside triphosphate reductase	95.2	9.9	58.2
MGA_214	LOCUS_02140	sequence1:137586..137807(+)	frameshift,internal_stop_codon	137339..137341(+),137405..137407(+),137543..137545(+)	137512,137329,137971	WP_005790561.1	anaerobic ribonucleoside triphosphate reductase	67.1	5.9	59.2
MGA_215	LOCUS_02150	sequence1:137810..138031(+)	frameshift,internal_stop_codon	137541..137543(+)	137971,138140	WP_008766366.1	anaerobic ribonucleoside triphosphate reductase	72.6	6.6	52.8
MGA_216	LOCUS_02160	sequence1:137946..138173(+)	frameshift,internal_stop_codon	138417..138419(+)	138146,137971	WP_005790561.1	anaerobic ribonucleoside triphosphate reductase	78.7	7.4	72.9
MGA_217	LOCUS_02170	sequence1:138209..138418(+)	frameshift,internal_stop_codon	138417..138419(+)	138146,137971	WP_005790561.1	anaerobic ribonucleoside triphosphate reductase	94.2	8.2	58.5
MGA_219	LOCUS_02190	sequence1:140745..140972(-)	internal_stop_codon	140976..140978(-),141024..141026(-)		WP_011166365.1	M17 family metallopeptidase	98.7	16.4	50.7
MGA_220	LOCUS_02200	sequence1:141024..141533(-)	frameshift,internal_stop_codon	140976..140978(-),141024..141026(-)	141610,141588	WP_011182968.1	M17 family metallopeptidase	100.0	37.6	67.5
MGA_221	LOCUS_02210	sequence1:141593..142099(-)	frameshift		141625,141588	WP_011166365.1	M17 family metallopeptidase	97.0	36.4	40.9
MGA_223	LOCUS_02230	sequence1:142894..143274(+)	internal_stop_codon	143272..143274(+),143371..143373(+)		WP_011166436.1	oligoendopeptidase F	99.2	20.5	47.2
MGA_224	LOCUS_02240	sequence1:143425..143643(+)	internal_stop_codon	143641..143643(+),143272..143274(+),143371..143373(+),143776..143778(+)		WP_011166436.1	oligoendopeptidase F	100.0	12.1	68.1
MGA_226	LOCUS_02260	sequence1:144048..144443(-)	internal_stop_codon	144489..144491(-)		WP_004081762.1	cob(I)yrinic acid a,c-diamide adenosyltransferase	78.6	59.4	35.0
MGA_230	LOCUS_02300	sequence1:146199..146618(+)	internal_stop_codon	146616..146618(+)		WP_001250625.1	class II fructose-bisphosphatase	90.6	37.5	41.3
MGA_237	LOCUS_02370	sequence1:150000..150380(-)	internal_stop_codon	150486..150488(-),150399..150401(-)		WP_011166439.1	Cof-type HAD-IIB family hydrolase	100.0	44.4	48.5
MGA_238	LOCUS_02380	sequence1:150486..150860(-)	internal_stop_codon	150486..150488(-),150399..150401(-)		WP_011166439.1	Cof-type HAD-IIB family hydrolase	99.2	42.0	56.1
MGA_239	LOCUS_02390	sequence1:151063..152013(+)	internal_stop_codon	152011..152013(+),152251..152253(+)		WP_002288348.1	ATP-dependent chaperone ClpB	95.9	34.9	72.3
MGA_240	LOCUS_02400	sequence1:152509..153204(+)	internal_stop_codon	152251..152253(+)		WP_011183317.1	AAA family ATPase	95.7	31.4	69.5
MGA_243	LOCUS_02430	sequence1:155076..155327(+)	internal_stop_codon	155325..155327(+)		WP_000034662.1	molecular chaperone DnaK	100.0	13.7	77.1
MGA_244	LOCUS_02440	sequence1:155421..155702(+)	internal_stop_codon	155325..155327(+),155700..155702(+)		WP_011101636.1	molecular chaperone DnaK	98.9	14.8	84.8
MGA_245	LOCUS_02450	sequence1:155703..156878(+)	internal_stop_codon	155700..155702(+)		WP_011183314.1	molecular chaperone DnaK	94.4	62.3	62.9
MGA_262	LOCUS_02620	sequence1:169177..169425(+)	partial			WP_010874783.1	Cof-type HAD-IIB family hydrolase	93.9	27.6	40.0
MGA_263	LOCUS_02630	sequence1:169561..169992(+)	internal_stop_codon	169549..169551(+),169423..169425(+)		WP_011166283.1	Cof-type HAD-IIB family hydrolase	97.2	51.1	39.0
MGA_264	LOCUS_02640	sequence1:170138..170341(+)	internal_stop_codon	170120..170122(+)		WP_011166282.1	thioredoxin	98.5	64.7	48.5
MGA_265	LOCUS_02650	sequence1:170869..171462(+)	internal_stop_codon	171460..171462(+)		WP_011947930.1	arginine deiminase	98.0	48.1	50.8
MGA_266	LOCUS_02660	sequence1:171658..171882(+)	internal_stop_codon	172051..172053(+),171460..171462(+),171880..171882(+)		WP_011836692.1	arginine deiminase	100.0	18.6	44.7
MGA_267	LOCUS_02670	sequence1:171898..172053(+)	internal_stop_codon	172051..172053(+),171880..171882(+)		WP_002557431.1	arginine deiminase	100.0	12.4	60.8
MGA_268	LOCUS_02680	sequence1:172105..172485(+)	internal_stop_codon	172483..172485(+),172681..172683(+)		WP_000793596.1	ornithine carbamoyltransferase	97.6	37.0	71.5
MGA_269	LOCUS_02690	sequence1:172519..172683(+)	internal_stop_codon	172804..172806(+),172834..172836(+),172483..172485(+),172681..172683(+)		WP_002682235.1	ornithine carbamoyltransferase	100.0	15.7	63.0
MGA_270	LOCUS_02700	sequence1:172876..173106(+)	internal_stop_codon	172804..172806(+),172834..172836(+),172681..172683(+)		WP_011861433.1	ornithine carbamoyltransferase	97.4	21.8	68.0
MGA_271	LOCUS_02710	sequence1:173524..173769(+)	internal_stop_codon	173782..173784(+),173767..173769(+),173284..173286(+),173506..173508(+),173821..173823(+)		WP_001290378.1	YfcC family protein	100.0	15.1	53.1
MGA_274	LOCUS_02740	sequence1:174259..174588(+)	internal_stop_codon	174157..174159(+),174586..174588(+),174040..174042(+),174253..174255(+),173998..174000(+)		WP_011182912.1	YfcC family protein	67.0	14.0	58.9
MGA_275	LOCUS_02750	sequence1:174811..175278(+)	internal_stop_codon	175276..175278(+)		WP_011167019.1	carbamate kinase	100.0	50.0	63.9
MGA_276	LOCUS_02760	sequence1:175315..175746(+)	internal_stop_codon	175276..175278(+)		WP_011986908.1	carbamate kinase	97.9	44.6	55.7
MGA_281	LOCUS_02810	sequence1:177629..177928(+)	internal_stop_codon	178157..178159(+),177566..177568(+),178190..178192(+),177986..177988(+),177926..177928(+)		WP_003246072.1	leucine--tRNA ligase	100.0	12.3	77.8
MGA_282	LOCUS_02820	sequence1:178007..178159(+)	internal_stop_codon	178157..178159(+),178190..178192(+),177986..177988(+),177926..177928(+)		WP_015545302.1	leucine--tRNA ligase	100.0	6.2	70.0
MGA_283	LOCUS_02830	sequence1:178205..178492(+)	internal_stop_codon	178157..178159(+),178490..178492(+),178190..178192(+),177986..177988(+),177926..177928(+)		WP_003246072.1	leucine--tRNA ligase	98.9	11.7	54.3
MGA_284	LOCUS_02840	sequence1:178505..178939(+)	internal_stop_codon	179171..179173(+),178490..178492(+),179102..179104(+),179015..179017(+),179000..179002(+),178937..178939(+)		WP_001830785.1	leucine--tRNA ligase	98.6	17.8	62.9
MGA_285	LOCUS_02850	sequence1:179243..179386(+)	internal_stop_codon	179618..179620(+),179384..179386(+),179417..179419(+),179171..179173(+),179102..179104(+),179015..179017(+),179000..179002(+)		WP_011183388.1	leucine--tRNA ligase	100.0	5.9	78.7
MGA_286	LOCUS_02860	sequence1:179429..179620(+)	internal_stop_codon	179618..179620(+),179384..179386(+),179417..179419(+),179171..179173(+),179717..179719(+)		WP_011183388.1	leucine--tRNA ligase	98.4	7.7	56.5
MGA_303	LOCUS_03030	sequence1:191991..192248(+)	internal_stop_codon	192246..192248(+)		WP_011166223.1	methionine--tRNA ligase	91.8	15.3	67.9
MGA_304	LOCUS_03040	sequence1:192312..192686(+)	internal_stop_codon	192684..192686(+),192759..192761(+),192246..192248(+),192828..192830(+)		WP_003733137.1	methionine--tRNA ligase	100.0	19.9	51.5
MGA_305	LOCUS_03050	sequence1:192837..193298(+)	internal_stop_codon	192684..192686(+),192759..192761(+),193296..193298(+),192828..192830(+)		WP_011182933.1	methionine--tRNA ligase	100.0	30.3	53.2
MGA_307	LOCUS_03070	sequence1:193591..193860(+)	internal_stop_codon	193858..193860(+)		WP_011183567.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	98.9	14.1	72.7
MGA_308	LOCUS_03080	sequence1:193903..194973(+)	internal_stop_codon	193858..193860(+),194971..194973(+)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	100.0	56.8	60.5
MGA_309	LOCUS_03090	sequence1:194992..195474(+)	internal_stop_codon	194971..194973(+)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	87.5	22.4	48.2
MGA_310	LOCUS_03100	sequence1:195474..196016(+)	internal_stop_codon	196014..196016(+),196053..196055(+),196074..196076(+)		WP_011182984.1	cysteine--tRNA ligase	99.4	40.6	50.3
MGA_311	LOCUS_03110	sequence1:196263..196718(+)	internal_stop_codon	196014..196016(+),196716..196718(+),196053..196055(+),196074..196076(+)		WP_011167108.1	cysteine--tRNA ligase	91.4	29.5	32.9
MGA_312	LOCUS_03120	sequence1:196744..197337(+)	frameshift,internal_stop_codon	197335..197337(+)	197367	WP_011183430.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	77.7	32.7	41.7
MGA_313	LOCUS_03130	sequence1:197426..197767(+)	frameshift,internal_stop_codon	197335..197337(+)	197367	WP_011922419.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	87.6	22.3	44.4
MGA_314	LOCUS_03140	sequence1:197884..198393(+)	internal_stop_codon	198391..198393(+)		WP_002287441.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	97.0	57.7	40.0
MGA_318	LOCUS_03180	sequence1:200308..200547(+)	internal_stop_codon	200209..200211(+)		WP_005904074.1	transcription termination/antitermination protein NusG	74.7	30.6	44.1
MGA_319	LOCUS_03190	sequence1:200561..200779(+)	internal_stop_codon	200777..200779(+)		WP_001148797.1	DNA-3-methyladenine glycosylase	86.1	30.2	45.2
MGA_320	LOCUS_03200	sequence1:200816..201157(+)	internal_stop_codon	200777..200779(+)		WP_172636477.1	DNA-3-methyladenine glycosylase	100.0	60.6	38.6
MGA_322	LOCUS_03220	sequence1:202198..202356(-)	internal_stop_codon	202198..202200(-),202165..202167(-)		WP_011183237.1	isochorismatase family protein	100.0	31.9	59.6
MGA_327	LOCUS_03270	sequence1:204880..205767(+)	internal_stop_codon	205765..205767(+)		WP_011183556.1	redox-regulated ATPase YchF	100.0	80.5	60.3
MGA_328	LOCUS_03280	sequence1:205992..206171(+)	internal_stop_codon	206169..206171(+)		WP_011015827.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	98.3	36.2	55.2
MGA_329	LOCUS_03290	sequence1:206193..206444(+)	internal_stop_codon	206169..206171(+)		WP_010963756.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	78.3	41.9	44.6
MGA_340	LOCUS_03400	sequence1:213090..213284(+)	internal_stop_codon	213282..213284(+)		WP_011183547.1	glutamate--tRNA ligase	93.8	12.4	83.3
MGA_341	LOCUS_03410	sequence1:213285..213647(+)	internal_stop_codon	213282..213284(+),213645..213647(+)		WP_002287447.1	glutamate--tRNA ligase	99.2	24.3	42.0
MGA_342	LOCUS_03420	sequence1:213690..213950(+)	internal_stop_codon	213948..213950(+),214059..214061(+),213645..213647(+),214164..214166(+)		WP_003732826.1	glutamate--tRNA ligase	100.0	17.5	69.8
MGA_344	LOCUS_03440	sequence1:214386..214553(+)	internal_stop_codon	214353..214355(+),214164..214166(+)		WP_011166335.1	glutamate--tRNA ligase	78.2	8.9	74.4
MGA_345	LOCUS_03450	sequence1:214648..215136(+)	internal_stop_codon	214600..214602(+),215134..215136(+)		WP_011183546.1	HD domain-containing protein	100.0	38.1	54.3
MGA_346	LOCUS_03460	sequence1:215230..215775(+)	internal_stop_codon	215134..215136(+)		WP_011183546.1	HD domain-containing protein	91.2	41.8	31.6
MGA_347	LOCUS_03470	sequence1:216401..217231(+)	internal_stop_codon	217229..217231(+),217382..217384(+)		WP_011183544.1	CTP synthase	99.3	51.5	68.2
MGA_348	LOCUS_03480	sequence1:217241..217384(+)	internal_stop_codon	217229..217231(+),217382..217384(+)		WP_011027968.1	CTP synthase	97.9	8.4	54.3
MGA_349	LOCUS_03490	sequence1:217436..217765(+)	internal_stop_codon	217229..217231(+),217763..217765(+),217382..217384(+)		WP_209320045.1	CTP synthase (glutamine hydrolyzing)	100.0	20.4	60.9
MGA_350	LOCUS_03500	sequence1:217814..218002(+)	internal_stop_codon	217763..217765(+)		WP_011183544.1	CTP synthase	100.0	11.3	69.4
MGA_351	LOCUS_03510	sequence1:218107..218484(-)	partial			WP_003416869.1	thioredoxin-disulfide reductase	45.6	18.1	61.4
MGA_352	LOCUS_03520	sequence1:218824..219168(-)	internal_stop_codon	218641..218643(-),218818..218820(-),218824..218826(-)		WP_008763049.1	sugar kinase	99.1	32.6	36.3
MGA_356	LOCUS_03560	sequence1:220066..220398(-)	internal_stop_codon	220066..220068(-),219931..219933(-)		WP_011728678.1	GntR family transcriptional regulator	86.4	40.4	41.1
MGA_358	LOCUS_03580	sequence1:221876..222307(+)	frameshift,internal_stop_codon	222478..222480(+),222517..222519(+)	222386,222405,222534,222295,222317	WP_010963683.1	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	97.9	53.5	47.9
MGA_360	LOCUS_03600	sequence1:224027..224758(+)	internal_stop_codon	223865..223867(+),224960..224962(+),224756..224758(+),223931..223933(+)		WP_004254838.1	adenylosuccinate synthase	100.0	56.5	57.2
MGA_361	LOCUS_03610	sequence1:224768..224962(+)	internal_stop_codon	224960..224962(+),224756..224758(+)		WP_010966856.1	adenylosuccinate synthase	100.0	15.0	42.2
MGA_362	LOCUS_03620	sequence1:225301..226020(+)	internal_stop_codon	226018..226020(+),225226..225228(+),225166..225168(+),225193..225195(+)		WP_020862972.1	adenylosuccinate lyase	100.0	55.3	64.4
MGA_363	LOCUS_03630	sequence1:226084..226428(+)	internal_stop_codon	226018..226020(+)		WP_011182972.1	adenylosuccinate lyase	98.2	26.2	46.9
MGA_364	LOCUS_03640	sequence1:226430..226570(+)	internal_stop_codon	226568..226570(+)		WP_004597952.1	aminoacyl-tRNA hydrolase	93.5	23.8	56.8
MGA_365	LOCUS_03650	sequence1:226622..226999(+)	internal_stop_codon	226568..226570(+)		WP_011167103.1	aminoacyl-tRNA hydrolase	98.4	65.6	42.7
MGA_381	LOCUS_03810	sequence1:237586..238158(+)	internal_stop_codon	238156..238158(+)		WP_001557331.1	type I DNA topoisomerase	100.0	27.5	54.4
MGA_382	LOCUS_03820	sequence1:238285..238671(+)	internal_stop_codon	238156..238158(+),238669..238671(+)		WP_005902939.1	type I DNA topoisomerase	96.1	16.4	53.2
MGA_383	LOCUS_03830	sequence1:238714..239208(+)	internal_stop_codon	238669..238671(+),239206..239208(+)		WP_012047858.1	type I DNA topoisomerase	100.0	23.9	40.4
MGA_384	LOCUS_03840	sequence1:239239..239586(+)	internal_stop_codon	239206..239208(+)		WP_009892959.1	type I DNA topoisomerase	65.2	10.9	46.1
MGA_387	LOCUS_03870	sequence1:240289..240936(+)	internal_stop_codon	240253..240255(+),240244..240246(+),240934..240936(+)		WP_011166689.1	glucose-6-phosphate isomerase	100.0	50.1	63.4
MGA_388	LOCUS_03880	sequence1:241069..241287(+)	internal_stop_codon	241285..241287(+),240934..240936(+)		WP_011166689.1	glucose-6-phosphate isomerase	100.0	16.9	51.4
MGA_390	LOCUS_03900	sequence1:242050..243129(+)	internal_stop_codon	243127..243129(+)		WP_011166497.1	ribonuclease J	100.0	61.4	44.6
MGA_391	LOCUS_03910	sequence1:243133..243717(+)	internal_stop_codon	243127..243129(+)		WP_011166497.1	ribonuclease J	99.5	33.3	52.0
MGA_399	LOCUS_03990	sequence1:249108..249974(+)	partial			WP_011166888.1	energy-coupling factor transporter ATPase	96.9	68.4	61.6
MGA_401	LOCUS_04010	sequence1:250891..251169(+)	partial			WP_011183051.1	energy-coupling factor transporter transmembrane component T	92.4	25.6	54.1
MGA_402	LOCUS_04020	sequence1:251287..251721(+)	partial			WP_011166886.1	energy-coupling factor transporter transmembrane component T	88.9	38.1	73.4
MGA_403	LOCUS_04030	sequence1:252159..252596(+)	internal_stop_codon	251907..251909(+),252027..252029(+)		WP_011183052.1	tRNA pseudouridine(38-40) synthase TruA	100.0	59.0	43.7
MGA_407	LOCUS_04070	sequence1:254549..256057(+)	internal_stop_codon	256055..256057(+),256280..256282(+),256160..256162(+)		WP_166508209.1	ferrous iron transport protein B	97.8	74.0	55.6
MGA_408	LOCUS_04080	sequence1:256286..256477(+)	internal_stop_codon	256475..256477(+),256055..256057(+),256280..256282(+),256160..256162(+)		WP_166508209.1	ferrous iron transport protein B	100.0	9.6	63.5
MGA_412	LOCUS_04120	sequence1:258137..258961(+)	internal_stop_codon	258959..258961(+)		WP_011182981.1	replicative DNA helicase	95.6	58.5	35.7
MGA_413	LOCUS_04130	sequence1:259055..259366(+)	internal_stop_codon	259364..259366(+),258959..258961(+)		WP_011182981.1	replicative DNA helicase	93.2	21.2	74.0
MGA_422	LOCUS_04220	sequence1:263472..263837(+)	internal_stop_codon	263400..263402(+),263454..263456(+),263277..263279(+)		WP_011166912.1	50S ribosomal protein L4	99.2	57.7	57.5
MGA_424	LOCUS_04240	sequence1:264174..264794(+)	internal_stop_codon	264927..264929(+),264792..264794(+),264816..264818(+)		WP_011183023.1	50S ribosomal protein L2	100.0	73.7	72.5
MGA_426	LOCUS_04260	sequence1:265904..266386(+)	internal_stop_codon	265838..265840(+),265868..265870(+),265826..265828(+),266384..266386(+)		WP_011166907.1	30S ribosomal protein S3	98.1	67.4	69.4
MGA_427	LOCUS_04270	sequence1:266507..266629(+)	internal_stop_codon	266699..266701(+),266783..266785(+),266687..266689(+),266627..266629(+)		WP_011183027.1	50S ribosomal protein L16	100.0	29.2	70.0
MGA_428	LOCUS_04280	sequence1:266920..267717(+)	partial			WP_011166905.1	50S ribosomal protein L29	40.8	74.6	40.7
MGA_439	LOCUS_04390	sequence1:271989..272339(+)	internal_stop_codon	272337..272339(+),272469..272471(+),272388..272390(+),272559..272561(+)		WP_011183039.1	preprotein translocase subunit SecY	94.8	24.5	58.8
MGA_440	LOCUS_04400	sequence1:272739..273008(+)	internal_stop_codon	272670..272672(+),272559..272561(+),273006..273008(+)		WP_011166894.1	preprotein translocase subunit SecY	97.8	17.8	69.0
MGA_441	LOCUS_04410	sequence1:273054..273413(+)	internal_stop_codon	273006..273008(+)		WP_011166894.1	preprotein translocase subunit SecY	88.2	21.8	72.4
MGA_442	LOCUS_04420	sequence1:273438..273683(+)	internal_stop_codon	273681..273683(+)		WP_008760056.1	adenylate kinase	85.2	36.5	58.0
MGA_443	LOCUS_04430	sequence1:273807..274049(+)	internal_stop_codon	273681..273683(+)		WP_011183041.1	nucleoside monophosphate kinase	80.0	30.2	62.5
MGA_446	LOCUS_04460	sequence1:274856..274987(+)	internal_stop_codon	274985..274987(+)		WP_008362476.1	30S ribosomal protein S11	76.7	25.6	78.8
MGA_447	LOCUS_04470	sequence1:275003..275245(+)	internal_stop_codon	274985..274987(+)		WP_008362476.1	30S ribosomal protein S11	100.0	62.0	72.5
MGA_453	LOCUS_04530	sequence1:278313..280178(+)	partial			WP_020862895.1	ABC transporter permease	99.0	42.3	27.7
MGA_456	LOCUS_04560	sequence1:280899..281531(+)	internal_stop_codon	281529..281531(+)		WP_011183053.1	ABC transporter permease	98.6	14.0	31.7
MGA_457	LOCUS_04570	sequence1:281856..282227(+)	internal_stop_codon	282225..282227(+),281772..281774(+)		WP_020862895.1	ABC transporter permease	100.0	9.0	34.7
MGA_465	LOCUS_04650	sequence1:286520..287053(+)	internal_stop_codon	286508..286510(+)		WP_011166938.1	RDD family protein	93.2	64.5	31.3
MGA_466	LOCUS_04660	sequence1:287094..287255(+)	internal_stop_codon	287535..287537(+),287346..287348(+),287253..287255(+)		WP_011707891.1	DNA helicase Rep	73.6	5.8	74.4
MGA_467	LOCUS_04670	sequence1:287829..289079(+)	internal_stop_codon	287724..287726(+),289146..289148(+),289077..289079(+),287604..287606(+),287799..287801(+)		WP_011166937.1	UvrD-helicase domain-containing protein	99.5	57.2	40.8
MGA_471	LOCUS_04710	sequence1:290751..291398(+)	internal_stop_codon	291396..291398(+)		WP_011166293.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	100.0	67.4	56.7
MGA_472	LOCUS_04720	sequence1:291501..291701(+)	internal_stop_codon	291396..291398(+)		WP_011166293.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	92.4	19.7	50.8
MGA_473	LOCUS_04730	sequence1:291731..292375(+)	internal_stop_codon	292373..292375(+),292445..292447(+)		WP_011183381.1	MurR/RpiR family transcriptional regulator	98.6	82.3	35.5
MGA_475	LOCUS_04750	sequence1:293473..293973(+)	internal_stop_codon	293971..293973(+)		WP_011183561.1	purine-nucleoside phosphorylase	99.4	69.8	64.8
MGA_476	LOCUS_04760	sequence1:294007..294183(+)	internal_stop_codon	293971..293973(+)		WP_011183561.1	purine-nucleoside phosphorylase	98.3	24.3	64.9
MGA_477	LOCUS_04770	sequence1:294205..294903(+)	internal_stop_codon	294901..294903(+),295168..295170(+)		WP_011166290.1	asparagine--tRNA ligase	93.1	47.1	65.3
MGA_478	LOCUS_04780	sequence1:294904..295170(+)	internal_stop_codon	295426..295428(+),294901..294903(+),295168..295170(+)		WP_011166290.1	asparagine--tRNA ligase	98.9	19.2	50.6
MGA_479	LOCUS_04790	sequence1:295174..295428(+)	internal_stop_codon	295426..295428(+),294901..294903(+),295168..295170(+)		WP_011166290.1	asparagine--tRNA ligase	100.0	18.6	70.2
MGA_485	LOCUS_04850	sequence1:299510..299650(+)	internal_stop_codon	299849..299851(+),299906..299908(+),299648..299650(+)		WP_011166460.1	FAD-dependent oxidoreductase	100.0	10.1	80.4
MGA_486	LOCUS_04860	sequence1:299732..299851(+)	internal_stop_codon	299849..299851(+),299906..299908(+),299648..299650(+)		WP_011166460.1	FAD-dependent oxidoreductase	100.0	8.6	59.0
MGA_487	LOCUS_04870	sequence1:300062..300232(+)	internal_stop_codon	299906..299908(+),300230..300232(+),299849..299851(+)		WP_011166460.1	FAD-dependent oxidoreductase	100.0	12.3	57.1
MGA_488	LOCUS_04880	sequence1:300260..300517(+)	internal_stop_codon	300650..300652(+),300515..300517(+),300230..300232(+)		WP_011166460.1	FAD-dependent oxidoreductase	98.8	18.5	56.0
MGA_489	LOCUS_04890	sequence1:301295..301579(+)	internal_stop_codon	301577..301579(+)		WP_011986275.1	lipoate--protein ligase	97.9	28.4	42.6
MGA_490	LOCUS_04900	sequence1:301649..301861(+)	internal_stop_codon	301577..301579(+)		WP_011166461.1	lipoate--protein ligase	97.1	20.4	55.9
MGA_491	LOCUS_04910	sequence1:301894..302160(+)	internal_stop_codon	302191..302193(+),302158..302160(+)		WP_011166462.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	98.9	23.5	65.5
MGA_492	LOCUS_04920	sequence1:302212..302793(+)	internal_stop_codon	302191..302193(+),302158..302160(+),302791..302793(+),302857..302859(+)		WP_011166462.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	100.0	52.2	62.2
MGA_493	LOCUS_04930	sequence1:302997..303728(+)	internal_stop_codon	303726..303728(+)		WP_011182937.1	alpha-ketoacid dehydrogenase subunit beta	100.0	73.9	70.4
MGA_494	LOCUS_04940	sequence1:303738..303986(+)	internal_stop_codon	303726..303728(+)		WP_011166463.1	alpha-ketoacid dehydrogenase subunit beta	98.8	24.6	64.2
MGA_496	LOCUS_04960	sequence1:305307..305555(+)	internal_stop_codon	305553..305555(+)		WP_011182939.1	dihydrolipoyl dehydrogenase	100.0	13.8	62.7
MGA_497	LOCUS_04970	sequence1:305562..306692(+)	internal_stop_codon	305553..305555(+)		WP_011182939.1	dihydrolipoyl dehydrogenase	97.9	62.3	58.2
MGA_500	LOCUS_05000	sequence1:308640..309128(+)	frameshift,internal_stop_codon	309127..309129(+)	308634	WP_010990051.1	fructose-specific PTS transporter subunit EIIC	79.6	19.8	39.5
MGA_501	LOCUS_05010	sequence1:309210..309578(+)	internal_stop_codon	309576..309578(+),309126..309128(+),309001..309003(+)		WP_003245781.1	PTS mannose transporter subunit IIABC	70.5	12.5	36.0
MGA_502	LOCUS_05020	sequence1:309560..309772(-)	frameshift,internal_stop_codon	309785..309787(-),309978..309980(-),309884..309886(-),309754..309756(-),309860..309862(-)	309902	WP_011861812.1	PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC	61.4	6.7	55.8
MGA_505	LOCUS_05050	sequence1:310701..310940(+)	internal_stop_codon	310557..310559(+),310938..310940(+)		WP_012027496.1	pyridoxal phosphate-dependent aminotransferase	94.9	19.4	42.7
MGA_526	LOCUS_05260	sequence1:322173..322508(+)	internal_stop_codon	322506..322508(+),322797..322799(+)		WP_005051985.1	ATPase RavA	98.2	22.1	61.8
MGA_527	LOCUS_05270	sequence1:322596..322799(+)	internal_stop_codon	322986..322988(+),322506..322508(+),322797..322799(+),322914..322916(+)		WP_011202758.1	AAA family ATPase	97.0	12.4	50.8
MGA_531	LOCUS_05310	sequence1:324462..325073(+)	internal_stop_codon	324396..324398(+)		WP_005817735.1	VWA domain-containing protein	92.6	41.0	35.1
MGA_553	LOCUS_05530	sequence1:337562..338017(+)	internal_stop_codon	338015..338017(+)		WP_011166595.1	(d)CMP kinase	99.3	67.6	46.7
MGA_555	LOCUS_05550	sequence1:338235..338381(+)	internal_stop_codon	338379..338381(+)		WP_003640588.1	ribosome biogenesis GTPase Der	93.8	10.3	82.2
MGA_556	LOCUS_05560	sequence1:338460..339125(+)	internal_stop_codon	339123..339125(+),338379..338381(+)		WP_011166596.1	ribosome biogenesis GTPase Der	100.0	50.8	57.0
MGA_557	LOCUS_05570	sequence1:339156..339551(+)	internal_stop_codon	339123..339125(+)		WP_011183096.1	ribosome biogenesis GTPase Der	96.9	29.2	62.2
MGA_561	LOCUS_05610	sequence1:342315..342458(-)	partial			WP_011166447.1	PTS transporter subunit EIIB	80.9	10.1	65.8
MGA_563	LOCUS_05630	sequence1:342771..343055(-)	frameshift,internal_stop_codon	342770..342772(-)	343193,343049	WP_020862581.1	MurR/RpiR family transcriptional regulator	98.9	33.6	53.8
MGA_564	LOCUS_05640	sequence1:343137..343355(-)	frameshift		343193,343052	WP_020862581.1	MurR/RpiR family transcriptional regulator	86.1	22.0	53.2
MGA_565	LOCUS_05650	sequence1:344077..344487(+)	internal_stop_codon	344485..344487(+),344713..344715(+),344548..344550(+)		WP_011166447.1	PTS transporter subunit EIIB	98.5	33.7	54.5
MGA_566	LOCUS_05660	sequence1:345172..345348(+)	frameshift,internal_stop_codon	345347..345349(+),345143..345145(+),345167..345169(+)	345028	WP_011817229.1	PTS N-acetylmuramic acid transporter subunit IIBC	87.9	10.6	52.9
MGA_568	LOCUS_05680	sequence1:345782..345982(+)	frameshift,internal_stop_codon	346061..346063(+)	346024,346093,345973	WP_011166445.1	N-acetylmuramic acid 6-phosphate etherase	92.4	20.2	47.5
MGA_569	LOCUS_05690	sequence1:346090..346689(+)	frameshift,internal_stop_codon	346061..346063(+)	346024,346093,345973	WP_011166445.1	N-acetylmuramic acid 6-phosphate etherase	98.5	64.6	57.1
MGA_573	LOCUS_05730	sequence1:348449..348697(+)	internal_stop_codon	348695..348697(+),348290..348292(+)		WP_012545097.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	90.2	12.7	41.9
MGA_574	LOCUS_05740	sequence1:349247..349909(+)	internal_stop_codon	349907..349909(+),349175..349177(+),350018..350020(+)		WP_011339403.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	98.6	29.1	37.1
MGA_585	LOCUS_05850	sequence1:353620..353919(+)	partial			WP_010974920.1	type IV secretion system ATPase VirD4	69.7	9.6	46.4
MGA_586	LOCUS_05860	sequence1:354139..354657(+)	internal_stop_codon	354655..354657(+)		WP_011244838.1	type IV secretory system conjugative DNA transfer family protein	45.3	9.0	38.0
MGA_590	LOCUS_05900	sequence1:356649..357233(+)	internal_stop_codon	357231..357233(+)		WP_044682503.1	ATPase AAA	92.3	22.9	26.7
MGA_600	LOCUS_06000	sequence1:361837..362331(+)	partial			WP_011107551.1	magnesium-translocating P-type ATPase	92.7	17.2	54.6
MGA_608	LOCUS_06080	sequence1:368144..368851(+)	partial			WP_003548928.1	ABC transporter ATP-binding protein	90.2	73.9	35.8
MGA_616	LOCUS_06160	sequence1:373003..373710(+)	internal_stop_codon	373708..373710(+),373780..373782(+)		WP_011183211.1	DEAD/DEAH box helicase family protein	55.3	14.4	54.6
MGA_617	LOCUS_06170	sequence1:373792..374769(+)	frameshift,internal_stop_codon	373708..373710(+),373780..373782(+)	374760	WP_011183211.1	DEAD/DEAH box helicase family protein	98.2	35.1	55.5
MGA_618	LOCUS_06180	sequence1:374744..375103(+)	frameshift,internal_stop_codon	375101..375103(+)	374760	WP_011183211.1	DEAD/DEAH box helicase family protein	94.1	12.4	68.8
MGA_619	LOCUS_06190	sequence1:375197..375631(+)	internal_stop_codon	375629..375631(+),375101..375103(+),375824..375826(+)		WP_011183211.1	DEAD/DEAH box helicase family protein	94.4	15.0	47.1
MGA_636	LOCUS_06360	sequence1:384472..384807(+)	internal_stop_codon	384820..384822(+),384847..384849(+),384805..384807(+),384883..384885(+)		WP_011183406.1	Pr6Pr family membrane protein	77.5	27.9	36.4
MGA_638	LOCUS_06380	sequence1:386454..387653(+)	partial			WP_011183423.1	DEAD/DEAH box helicase	93.0	55.7	45.6
MGA_640	LOCUS_06400	sequence1:389802..390182(+)	frameshift,internal_stop_codon	389722..389724(+)	389808	WP_002289801.1	AEC family transporter	79.4	28.1	39.0
MGA_643	LOCUS_06430	sequence1:392134..392259(+)	internal_stop_codon	392437..392439(+),392263..392265(+),391966..391968(+),392257..392259(+)		WP_001830862.1	valine--tRNA ligase	97.6	4.5	70.0
MGA_644	LOCUS_06440	sequence1:392503..392637(+)	internal_stop_codon	392437..392439(+),392263..392265(+),392635..392637(+),392257..392259(+)		WP_011166500.1	valine--tRNA ligase	100.0	4.9	77.3
MGA_645	LOCUS_06450	sequence1:392650..392991(+)	internal_stop_codon	393136..393138(+),392989..392991(+),393226..393228(+),393139..393141(+),392635..392637(+),393094..393096(+),392437..392439(+)		WP_011183252.1	valine--tRNA ligase	100.0	13.1	62.3
MGA_646	LOCUS_06460	sequence1:393385..393639(+)	internal_stop_codon	393136..393138(+),393226..393228(+),393754..393756(+),393373..393375(+),393853..393855(+),393139..393141(+),393637..393639(+),393295..393297(+)		WP_000072238.1	valine--tRNA ligase	100.0	9.5	75.0
MGA_647	LOCUS_06470	sequence1:393934..394545(+)	internal_stop_codon	393754..393756(+),393853..393855(+)		WP_011166500.1	valine--tRNA ligase	99.5	22.8	40.4
MGA_648	LOCUS_06480	sequence1:394547..394699(+)	frameshift,internal_stop_codon	394952..394954(+),394868..394870(+)	394690	WP_011183430.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	92.0	10.3	80.4
MGA_649	LOCUS_06490	sequence1:394744..394869(+)	frameshift,internal_stop_codon	394952..394954(+),394868..394870(+)	394978,394693	WP_011836971.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	95.1	8.8	66.7
MGA_650	LOCUS_06500	sequence1:395097..395351(+)	frameshift,internal_stop_codon	394867..394869(+),394951..394953(+)	394977,395322,395422	WP_002262867.1	methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	77.4	14.6	55.4
MGA_653	LOCUS_06530	sequence1:396378..397097(+)	internal_stop_codon	396360..396362(+),397095..397097(+),396189..396191(+)		WP_011166693.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	100.0	50.7	58.6
MGA_654	LOCUS_06540	sequence1:397116..397397(+)	internal_stop_codon	397095..397097(+)		WP_011166693.1	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	98.9	19.5	64.1
MGA_655	LOCUS_06550	sequence1:397449..397628(+)	internal_stop_codon	397626..397628(+)		WP_003416451.1	RidA family protein	100.0	46.8	57.6
MGA_657	LOCUS_06570	sequence1:398453..398842(+)	internal_stop_codon	398840..398842(+)		WP_011166264.1	peroxiredoxin	93.8	83.2	37.9
MGA_658	LOCUS_06580	sequence1:398993..399703(+)	internal_stop_codon	399701..399703(+)		WP_011948764.1	MATE family efflux transporter	89.4	40.9	23.2
MGA_663	LOCUS_06630	sequence1:402859..403098(+)	internal_stop_codon	403105..403107(+),403237..403239(+),403096..403098(+),403327..403329(+)		WP_011203420.1	thymidylate synthase	100.0	29.9	68.4
MGA_664	LOCUS_06640	sequence1:403351..403728(+)	internal_stop_codon	403105..403107(+),403237..403239(+),403096..403098(+),403327..403329(+)		WP_003598632.1	thymidylate synthase	100.0	39.2	70.4
MGA_666	LOCUS_06660	sequence1:404429..405007(+)	internal_stop_codon	404366..404368(+),404408..404410(+)		WP_020862806.1	lysophospholipid acyltransferase family protein	99.0	61.9	49.7
MGA_671	LOCUS_06710	sequence1:408602..409072(+)	internal_stop_codon	409070..409072(+),409100..409102(+)		WP_011166577.1	deoxynucleoside kinase	100.0	76.6	50.3
MGA_672	LOCUS_06720	sequence1:409399..409596(-)	internal_stop_codon	409399..409401(-),409291..409293(-),409663..409665(-)		WP_011183442.1	inorganic diphosphatase	100.0	34.8	76.9
MGA_673	LOCUS_06730	sequence1:409663..409827(-)	internal_stop_codon	409399..409401(-),409663..409665(-)		WP_011183442.1	inorganic diphosphatase	100.0	28.9	87.0
MGA_679	LOCUS_06790	sequence1:414508..414777(+)	internal_stop_codon	414775..414777(+)		WP_020862721.1	endopeptidase La	82.0	9.3	41.1
MGA_680	LOCUS_06800	sequence1:414826..415410(+)	internal_stop_codon	415408..415410(+),415429..415431(+),414775..414777(+)		WP_001047611.1	endopeptidase La	97.4	24.3	30.2
MGA_681	LOCUS_06810	sequence1:415474..416847(+)	internal_stop_codon	415408..415410(+),415429..415431(+)		WP_011183303.1	endopeptidase La	99.1	57.6	74.4
MGA_694	LOCUS_06940	sequence1:425698..426069(+)	internal_stop_codon	426067..426069(+)		WP_011166632.1	hypothetical protein	82.1	49.3	50.5
MGA_697	LOCUS_06970	sequence1:427480..428043(+)	frameshift,internal_stop_codon	428041..428043(+)	428142	WP_011183309.1	DUF2779 domain-containing protein	96.3	23.3	40.3
MGA_698	LOCUS_06980	sequence1:428159..428431(+)	frameshift,internal_stop_codon	428041..428043(+)	428148	WP_011183309.1	DUF2779 domain-containing protein	97.8	12.4	53.4
MGA_699	LOCUS_06990	sequence1:428448..429146(+)	internal_stop_codon	429144..429146(+)		WP_011183308.1	methionyl-tRNA formyltransferase	99.1	73.2	53.0
MGA_702	LOCUS_07020	sequence1:430966..431397(+)	frameshift,internal_stop_codon	431435..431437(+),431395..431397(+)	431406	WP_003709193.1	DeoR/GlpR family DNA-binding transcription regulator	93.0	52.2	36.8
MGA_703	LOCUS_07030	sequence1:431453..431668(+)	frameshift,internal_stop_codon	431435..431437(+),431395..431397(+)	431403	WP_011183076.1	DeoR/GlpR family DNA-binding transcription regulator	95.8	30.0	44.9
MGA_704	LOCUS_07040	sequence1:431731..431928(+)	frameshift,internal_stop_codon	431926..431928(+)	432000,432126	WP_011166991.1	fructose-specific PTS transporter subunit EIIC	92.3	8.8	40.0
MGA_705	LOCUS_07050	sequence1:432097..432543(+)	frameshift,internal_stop_codon	432518..432520(+),432506..432508(+),432548..432550(+),432551..432553(+),431926..431928(+)	432000,432496,432126	WP_011166991.1	fructose-specific PTS transporter subunit EIIC	81.1	18.4	53.6
MGA_707	LOCUS_07070	sequence1:432654..433001(+)	frameshift,internal_stop_codon	432547..432549(+),432505..432507(+),432550..432552(+),432517..432519(+),433073..433075(+),433039..433041(+)	433138,432996,433062,432495	WP_011166991.1	fructose-specific PTS transporter subunit EIIC	96.5	16.1	46.8
MGA_708	LOCUS_07080	sequence1:433154..433357(+)	frameshift,internal_stop_codon	433357..433359(+),433038..433040(+),433072..433074(+)	432995,433061,433143	WP_011166991.1	fructose-specific PTS transporter subunit EIIC	97.0	9.6	49.2
MGA_709	LOCUS_07090	sequence1:433408..433647(+)	frameshift,internal_stop_codon	433645..433647(+)	433725	WP_011183077.1	1-phosphofructokinase	62.0	15.8	63.3
MGA_711	LOCUS_07110	sequence1:433898..434128(+)	frameshift,internal_stop_codon	434175..434177(+),434112..434114(+)	434101	WP_011986316.1	1-phosphofructokinase	93.4	22.9	46.5
MGA_712	LOCUS_07120	sequence1:434211..434393(+)	frameshift,internal_stop_codon	434175..434177(+),434112..434114(+)	434101	WP_003549796.1	1-phosphofructokinase	98.3	19.4	45.8
MGA_718	LOCUS_07180	sequence1:438521..439537(+)	frameshift,internal_stop_codon	439535..439537(+),439641..439643(+)	439577,439540	WP_011166623.1	GTPase ObgE	98.8	77.6	58.0
MGA_719	LOCUS_07190	sequence1:439995..440240(+)	internal_stop_codon	440238..440240(+),439866..439868(+),440385..440387(+)		WP_011183419.1	NAD(+) synthase	100.0	34.0	43.4
MGA_721	LOCUS_07210	sequence1:440734..441108(+)	partial			WP_011254221.1	ribosome-associated translation inhibitor RaiA	83.9	56.7	33.7
MGA_736	LOCUS_07360	sequence1:453681..453893(+)	frameshift,internal_stop_codon	454017..454019(+),453567..453569(+),453891..453893(+),454065..454067(+)	453532	WP_011166496.1	APC family permease	71.4	9.3	50.0
MGA_737	LOCUS_07370	sequence1:454602..455066(+)	internal_stop_codon	455064..455066(+)		WP_004398802.1	YebC/PmpR family DNA-binding transcriptional regulator	99.4	64.6	57.4
MGA_738	LOCUS_07380	sequence1:455097..455336(+)	internal_stop_codon	455064..455066(+)		WP_010965592.1	YebC/PmpR family DNA-binding transcriptional regulator	98.7	30.1	39.7
MGA_741	LOCUS_07410	sequence1:456555..456869(+)	frameshift,internal_stop_codon	456802..456804(+),456351..456353(+),456519..456521(+)	457065,456746,457141	WP_011166725.1	Holliday junction branch migration DNA helicase RuvB	58.7	19.9	62.3
MGA_745	LOCUS_07450	sequence1:458339..459250(+)	internal_stop_codon	459248..459250(+)		WP_003021278.1	protein translocase subunit SecD	45.2	21.2	25.4
MGA_752	LOCUS_07520	sequence1:461604..462443(+)	internal_stop_codon	461574..461576(+),461598..461600(+),462441..462443(+)		WP_011183175.1	RelA/SpoT family protein	100.0	36.6	63.6
MGA_753	LOCUS_07530	sequence1:462597..463007(+)	frameshift,internal_stop_codon	463005..463007(+),462441..462443(+)	463169	WP_011166659.1	RelA/SpoT family protein	100.0	18.1	59.6
MGA_754	LOCUS_07540	sequence1:463225..463395(+)	frameshift,internal_stop_codon	463005..463007(+),463393..463395(+)	463175	WP_011183175.1	RelA/SpoT family protein	98.2	7.3	55.4
MGA_760	LOCUS_07600	sequence1:466741..467091(+)	internal_stop_codon	467089..467091(+)		WP_012544951.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	99.1	46.7	58.3
MGA_761	LOCUS_07610	sequence1:467122..467529(+)	internal_stop_codon	467089..467091(+)		WP_011183226.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	97.8	49.1	47.0
MGA_762	LOCUS_07620	sequence1:467622..468122(+)	partial			WP_011073211.1	thiol peroxidase	78.3	66.0	42.3
MGA_768	LOCUS_07680	sequence1:474661..475020(+)	partial			WP_020862581.1	MurR/RpiR family transcriptional regulator	77.3	32.1	33.7
MGA_770	LOCUS_07700	sequence1:475589..475984(+)	frameshift		475981	WP_003017863.1	type I DNA topoisomerase	85.5	14.3	39.3
MGA_773	LOCUS_07730	sequence1:478181..478309(+)	internal_stop_codon	477941..477943(+),478346..478348(+),478457..478459(+),478001..478003(+),478307..478309(+)		WP_011166626.1	nicotinate-nucleotide adenylyltransferase	100.0	11.4	69.0
MGA_774	LOCUS_07740	sequence1:478481..478687(+)	internal_stop_codon	478307..478309(+),478346..478348(+),478457..478459(+)		WP_011183272.1	nicotinate-nucleotide adenylyltransferase	97.1	17.9	42.4
MGA_775	LOCUS_07750	sequence1:478930..479385(+)	internal_stop_codon	478828..478830(+)		WP_011166627.1	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	97.4	64.7	31.3
MGA_782	LOCUS_07820	sequence1:481789..482115(+)	internal_stop_codon	482137..482139(+),482401..482403(+),482206..482208(+),482113..482115(+)		WP_011183510.1	alanine--tRNA ligase	100.0	12.1	83.3
MGA_783	LOCUS_07830	sequence1:482707..484047(+)	internal_stop_codon	484135..484137(+),482614..482616(+),484045..484047(+)		WP_011166380.1	alanine--tRNA ligase	100.0	49.8	51.1
MGA_794	LOCUS_07940	sequence1:491694..492074(+)	partial			WP_000203630.1	transcription antitermination factor NusB	65.1	59.0	31.7
MGA_795	LOCUS_07950	sequence1:492176..492814(+)	internal_stop_codon	492812..492814(+)		WP_000415249.1	exodeoxyribonuclease VII large subunit	100.0	46.7	48.1
MGA_798	LOCUS_07980	sequence1:494369..495274(+)	internal_stop_codon	495272..495274(+)		WP_010880536.1	1-deoxy-D-xylulose-5-phosphate synthase	93.0	45.7	41.4
MGA_799	LOCUS_07990	sequence1:495344..495796(+)	internal_stop_codon	495272..495274(+)		WP_010932029.1	1-deoxy-D-xylulose-5-phosphate synthase	89.3	20.7	45.5
MGA_803	LOCUS_08030	sequence1:498171..498305(+)	frameshift,internal_stop_codon	498443..498445(+),497983..497985(+),498305..498307(+)	498165,497930,497979,498141	WP_010890797.1	B3/4 domain-containing protein	95.5	17.0	61.9
MGA_827	LOCUS_08270	sequence1:512782..512976(+)	internal_stop_codon	512731..512733(+),512974..512976(+)		WP_011183502.1	amino acid permease	79.7	11.0	51.0
MGA_833	LOCUS_08330	sequence1:517645..517851(-)	partial			WP_004138603.1	ABC transporter ATP-binding protein	73.5	19.7	48.0
MGA_843	LOCUS_08430	sequence1:526707..527426(+)	internal_stop_codon	527688..527690(+),527424..527426(+),526686..526688(+)		WP_011166529.1	aspartate--tRNA ligase	100.0	41.3	56.5
MGA_844	LOCUS_08440	sequence1:527427..527690(+)	internal_stop_codon	527688..527690(+),527907..527909(+),527841..527843(+),527424..527426(+),527880..527882(+)		WP_010881092.1	aspartate--tRNA ligase	93.1	13.6	46.3
MGA_845	LOCUS_08450	sequence1:528093..528362(+)	internal_stop_codon	527880..527882(+),527907..527909(+),527841..527843(+)		WP_011166529.1	aspartate--tRNA ligase	96.6	15.0	54.7
MGA_847	LOCUS_08470	sequence1:529083..529235(+)	internal_stop_codon	529233..529235(+)		WP_000067891.1	transketolase	90.0	6.8	71.1
MGA_848	LOCUS_08480	sequence1:529398..529592(+)	internal_stop_codon	529233..529235(+),529590..529592(+),529701..529703(+)		WP_002295818.1	transketolase	100.0	9.6	73.4
MGA_850	LOCUS_08500	sequence1:530178..530804(+)	internal_stop_codon	530175..530177(+),530898..530900(+),529899..529901(+),530802..530804(+),529989..529991(+)		WP_011183246.1	transketolase	99.5	31.8	62.2
MGA_858	LOCUS_08580	sequence1:538250..538447(-)	internal_stop_codon	538130..538132(-),538208..538210(-),538205..538207(-),538187..538189(-),538562..538564(-),538250..538252(-),538460..538462(-)		WP_011166321.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	98.5	24.0	54.7
MGA_860	LOCUS_08600	sequence1:539857..539991(+)	internal_stop_codon	539989..539991(+)		WP_011183206.1	DNA topoisomerase IV subunit B	88.6	6.0	82.1
MGA_861	LOCUS_08610	sequence1:540400..541518(+)	internal_stop_codon	541735..541737(+),541615..541617(+),541516..541518(+)		WP_002381887.1	DNA topoisomerase IV subunit B	99.5	54.6	58.0
MGA_864	LOCUS_08640	sequence1:542725..543018(+)	internal_stop_codon	543016..543018(+)		WP_011183207.1	DNA topoisomerase IV subunit A	97.9	10.5	73.7
MGA_865	LOCUS_08650	sequence1:543043..544242(+)	internal_stop_codon	544240..544242(+),544333..544335(+),543016..543018(+)		WP_011183207.1	DNA topoisomerase IV subunit A	100.0	43.9	58.9
MGA_866	LOCUS_08660	sequence1:544426..544959(+)	internal_stop_codon	544240..544242(+),544333..544335(+)		WP_001147466.1	DNA topoisomerase IV subunit A	94.4	21.1	35.9
MGA_868	LOCUS_08680	sequence1:545927..546706(+)	partial			WP_009902391.1	ABC transporter ATP-binding protein	77.2	68.2	32.4
MGA_898	LOCUS_08980	sequence1:567440..567865(+)	internal_stop_codon	567872..567874(+),567905..567907(+),567863..567865(+)		WP_011182943.1	FMN-dependent NADH-azoreductase	98.6	69.8	56.8
MGA_901	LOCUS_09010	sequence1:569237..569587(+)	internal_stop_codon	569585..569587(+),569186..569188(+),569183..569185(+)		WP_011070558.1	AbgT family transporter	89.7	20.2	47.6
MGA_914	LOCUS_09140	sequence1:579046..579321(+)	frameshift,internal_stop_codon	579505..579507(+)	579312	WP_011166731.1	DNA polymerase IV	92.3	20.9	44.0
MGA_921	LOCUS_09210	sequence1:583707..584012(+)	internal_stop_codon	584103..584105(+),584010..584012(+)		WP_011183360.1	ATP-binding cassette domain-containing protein	71.3	7.5	47.2
MGA_922	LOCUS_09220	sequence1:584160..584642(+)	internal_stop_codon	584103..584105(+),584010..584012(+)		WP_011166519.1	ABC transporter ATP-binding protein	53.1	36.3	36.0
MGA_938	LOCUS_09380	sequence1:596311..596577(-)	internal_stop_codon	596311..596313(-)		WP_002366931.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	95.5	27.2	51.2
MGA_939	LOCUS_09390	sequence1:597201..597554(-)	partial			WP_014584372.1	Cof-type HAD-IIB family hydrolase	59.0	24.0	40.6
MGA_942	LOCUS_09420	sequence1:599424..599945(-)	internal_stop_codon	600105..600107(-)		WP_011183222.1	SGNH/GDSL hydrolase family protein	76.9	32.0	27.1
MGA_943	LOCUS_09430	sequence1:600105..600476(-)	internal_stop_codon	600105..600107(-)		WP_011183222.1	SGNH/GDSL hydrolase family protein	95.1	28.5	38.8
MGA_948	LOCUS_09480	sequence1:603697..604134(+)	internal_stop_codon	604132..604134(+),604273..604275(+)		WP_010880999.1	(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	100.0	40.6	55.2
MGA_950	LOCUS_09500	sequence1:604285..604755(+)	internal_stop_codon	604132..604134(+),604273..604275(+)		WP_010886567.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	98.7	41.9	47.5
MGA_954	LOCUS_09540	sequence1:608292..608531(-)	internal_stop_codon	608553..608555(-),608292..608294(-)		WP_011183171.1	YitT family protein	75.9	11.7	45.0
MGA_961	LOCUS_09610	sequence1:611653..611964(-)	internal_stop_codon	612151..612153(-)		WP_011183203.1	uridine kinase	94.2	46.6	64.9
MGA_962	LOCUS_09620	sequence1:612151..612303(-)	internal_stop_codon	612151..612153(-)		WP_011183203.1	uridine kinase	82.0	20.2	66.7
MGA_963	LOCUS_09630	sequence1:612775..613023(-)	internal_stop_codon	613024..613026(-),613219..613221(-),613063..613065(-),612775..612777(-),613108..613110(-),612727..612729(-),613147..613149(-)		WP_011183501.1	ABC transporter	100.0	9.6	52.4
MGA_967	LOCUS_09670	sequence1:615464..615727(-)	internal_stop_codon	615734..615736(-),615728..615730(-)		WP_011166496.1	APC family permease	96.6	16.5	38.2
MGA_970	LOCUS_09700	sequence1:618100..618399(-)	internal_stop_codon	617926..617928(-),618100..618102(-)		WP_011183306.1	elongation factor P	98.0	52.4	60.8
MGA_974	LOCUS_09740	sequence1:621549..622052(-)	frameshift,internal_stop_codon	621408..621410(-),622314..622316(-)	621587	WP_011166322.1	ABC-F family ATP-binding cassette domain-containing protein	97.0	31.8	52.1
MGA_975	LOCUS_09750	sequence1:622314..622904(-)	internal_stop_codon	622314..622316(-)		WP_011166322.1	ABC-F family ATP-binding cassette domain-containing protein	100.0	38.3	60.7
MGA_976	LOCUS_09760	sequence1:622925..623077(-)	internal_stop_codon	623081..623083(-)		WP_011101675.1	ATP-dependent RecD-like DNA helicase	100.0	5.9	48.0
MGA_978	LOCUS_09780	sequence1:625088..625255(-)	internal_stop_codon	625364..625366(-),625325..625327(-)		WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	96.4	14.3	50.9
MGA_979	LOCUS_09790	sequence1:625364..625828(-)	internal_stop_codon	625364..625366(-),625967..625969(-),625325..625327(-)		WP_011183311.1	tRNA 2-thiouridine(34) synthase MnmA	99.4	40.9	66.0
MGA_980	LOCUS_09800	sequence1:625967..626221(-)	internal_stop_codon	625967..625969(-)		WP_011183311.1	tRNA 2-thiouridine(34) synthase MnmA	88.1	19.8	60.8
MGA_988	LOCUS_09880	sequence1:637300..637506(-)	internal_stop_codon	637618..637620(-)		WP_011183273.1	tRNA (cytidine(34)-2'-O)-methyltransferase	98.5	37.4	62.7
MGA_989	LOCUS_09890	sequence1:637618..637821(-)	internal_stop_codon	637618..637620(-)		WP_011166791.1	tRNA (cytidine(34)-2'-O)-methyltransferase	94.0	36.5	66.7
MGA_990	LOCUS_09900	sequence1:637808..638065(-)	internal_stop_codon	638150..638152(-)		WP_001830169.1	XTP/dITP diphosphatase	96.5	40.5	41.5
MGA_991	LOCUS_09910	sequence1:638150..638416(-)	internal_stop_codon	638150..638152(-)		WP_011476167.1	XTP/dITP diphosphatase	100.0	44.2	50.0
MGA_992	LOCUS_09920	sequence1:638499..639161(+)	partial			WP_197712461.1	phosphorylcholine kinase LicA	56.4	38.0	30.8
MGA_997	LOCUS_09970	sequence1:642052..642345(+)	partial			WP_011166844.1	hypothetical protein	93.8	24.2	37.4
MGA_1001	LOCUS_10010	sequence1:644164..645645(-)	partial			WP_011183432.1	ABC transporter ATP-binding protein	99.4	70.6	46.4
MGA_1007	LOCUS_10070	sequence1:647985..648602(-)	internal_stop_codon	648645..648647(-)		WP_012869172.1	hemolysin family protein	70.7	33.6	29.5
MGA_1013	LOCUS_10130	sequence1:652290..653297(-)	frameshift,internal_stop_codon	653376..653378(-)	653024,652990	WP_011182998.1	excinuclease ABC subunit UvrC	98.2	56.1	40.2
MGA_1014	LOCUS_10140	sequence1:653376..654071(-)	internal_stop_codon	653376..653378(-)		WP_011182998.1	excinuclease ABC subunit UvrC	98.3	38.6	62.1
MGA_1015	LOCUS_10150	sequence1:654629..654751(-)	internal_stop_codon	654806..654808(-)		WP_011183087.1	50S ribosomal protein L20	95.0	31.7	73.7
MGA_1016	LOCUS_10160	sequence1:654806..654988(-)	internal_stop_codon	654806..654808(-)		WP_001138362.1	50S ribosomal protein L20	78.3	39.8	72.3
MGA_1027	LOCUS_10270	sequence1:663030..664049(-)	internal_stop_codon	664098..664100(-)		WP_011183074.1	threonine--tRNA ligase	100.0	53.3	64.7
MGA_1028	LOCUS_10280	sequence1:664098..664319(-)	internal_stop_codon	664341..664343(-),664098..664100(-)		WP_001830850.1	threonine--tRNA ligase	100.0	11.3	60.3
MGA_1031	LOCUS_10310	sequence1:665365..665796(-)	internal_stop_codon	665281..665283(-),665365..665367(-),665839..665841(-)		WP_011183072.1	pyruvate kinase	100.0	29.9	79.7
MGA_1032	LOCUS_10320	sequence1:665839..666462(-)	frameshift,internal_stop_codon	665839..665841(-)	666454	WP_011183072.1	pyruvate kinase	99.5	43.1	66.5
MGA_1033	LOCUS_10330	sequence1:666419..666649(-)	frameshift		666460	WP_011166458.1	pyruvate kinase	81.6	13.0	71.0
MGA_1034	LOCUS_10340	sequence1:666709..667395(-)	internal_stop_codon	667501..667503(-),667546..667548(-)		WP_011183071.1	6-phosphofructokinase	93.0	65.3	56.1
MGA_1035	LOCUS_10350	sequence1:667546..667692(-)	internal_stop_codon	667501..667503(-),667546..667548(-)		WP_013447579.1	6-phosphofructokinase	97.9	14.4	72.3
MGA_1037	LOCUS_10370	sequence1:668485..668868(-)	internal_stop_codon	668914..668916(-)		WP_003733232.1	translation elongation factor Ts	94.5	39.5	55.8
MGA_1038	LOCUS_10380	sequence1:668914..669105(-)	internal_stop_codon	668914..668916(-),669262..669264(-)		WP_003547835.1	translation elongation factor Ts	100.0	18.8	45.3
MGA_1039	LOCUS_10390	sequence1:669449..670099(-)	internal_stop_codon	670271..670273(-),670175..670177(-),670325..670327(-),670214..670216(-)		WP_106517497.1	30S ribosomal protein S2	72.2	49.0	36.9
MGA_1043	LOCUS_10430	sequence1:672369..672848(+)	internal_stop_codon	672846..672848(+)		WP_000071586.1	ribonuclease HIII	75.5	41.5	38.0
MGA_1051	LOCUS_10510	sequence1:676999..677649(-)	internal_stop_codon	677806..677808(-),676999..677001(-),677836..677838(-),677881..677883(-),677707..677709(-)		WP_011166763.1	isoleucine--tRNA ligase	92.1	21.7	58.8
MGA_1052	LOCUS_10520	sequence1:677881..678057(-)	internal_stop_codon	677806..677808(-),677836..677838(-),677881..677883(-),677707..677709(-),678082..678084(-),678184..678186(-)		WP_003245512.1	isoleucine--tRNA ligase	94.8	5.9	56.4
MGA_1053	LOCUS_10530	sequence1:678184..678537(-)	internal_stop_codon	678826..678828(-),678550..678552(-),678691..678693(-),678676..678678(-),678082..678084(-),678184..678186(-)		WP_011166763.1	isoleucine--tRNA ligase	95.7	12.5	56.1
MGA_1054	LOCUS_10540	sequence1:678826..679053(-)	internal_stop_codon	678826..678828(-),678550..678552(-),678691..678693(-),679099..679101(-),679111..679113(-),678676..678678(-),679288..679290(-)		WP_011166763.1	isoleucine--tRNA ligase	100.0	8.2	53.3
MGA_1063	LOCUS_10630	sequence1:683847..684284(-)	internal_stop_codon	684330..684332(-)		WP_003731975.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	97.2	44.9	47.9
MGA_1064	LOCUS_10640	sequence1:684330..684788(-)	internal_stop_codon	684330..684332(-)		WP_002355891.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	98.7	47.8	58.6
MGA_1066	LOCUS_10660	sequence1:685075..685254(-)	internal_stop_codon	685066..685068(-),685075..685077(-)		WP_011183294.1	division/cell wall cluster transcriptional repressor MraZ	100.0	35.8	49.2
MGA_1070	LOCUS_10700	sequence1:686880..687221(+)	frameshift,internal_stop_codon	687132..687134(+)	687050,687395	WP_011183542.1	ABC transporter ATP-binding protein	46.0	22.2	51.9
MGA_1071	LOCUS_10710	sequence1:687439..687603(+)	frameshift		687394	WP_011183542.1	ABC transporter ATP-binding protein	100.0	23.1	53.7
MGA_1074	LOCUS_10740	sequence1:689809..690636(-)	frameshift,internal_stop_codon	690678..690680(-)	690920	WP_002288046.1	phenylalanine--tRNA ligase subunit beta	89.8	31.6	26.6
MGA_1075	LOCUS_10750	sequence1:690679..691446(-)	internal_stop_codon	690679..690681(-),691453..691455(-)		WP_011166772.1	phenylalanine--tRNA ligase subunit beta	97.3	29.8	29.6
MGA_1076	LOCUS_10760	sequence1:691453..692061(-)	internal_stop_codon	691453..691455(-),692179..692181(-)		WP_011183297.1	phenylalanine--tRNA ligase subunit beta	96.5	24.6	33.7
MGA_1077	LOCUS_10770	sequence1:692215..692385(-)	internal_stop_codon	692407..692409(-),692563..692565(-)		WP_000388219.1	phenylalanine--tRNA ligase subunit alpha	94.6	15.7	70.4
MGA_1078	LOCUS_10780	sequence1:692563..692790(-)	internal_stop_codon	692407..692409(-),693037..693039(-),692563..692565(-)		WP_011166773.1	phenylalanine--tRNA ligase subunit alpha	100.0	22.3	56.4
MGA_1079	LOCUS_10790	sequence1:693037..693252(-)	internal_stop_codon	693037..693039(-)		WP_003736387.1	phenylalanine--tRNA ligase subunit alpha	97.2	19.7	39.1
MGA_1092	LOCUS_10920	sequence1:701781..702062(-)	frameshift,internal_stop_codon	702117..702119(-)	702198	WP_011166519.1	ABC transporter ATP-binding protein	91.4	36.3	34.9
MGA_1093	LOCUS_10930	sequence1:702272..702547(-)	frameshift,internal_stop_codon	702117..702119(-)	702289,702198	WP_011387452.1	ABC transporter ATP-binding protein	73.6	11.0	46.3
MGA_1099	LOCUS_10990	sequence1:704672..705424(-)	frameshift,internal_stop_codon	705696..705698(-)	705440	WP_003229999.1	translation elongation factor 4	100.0	40.8	65.2
MGA_1100	LOCUS_11000	sequence1:705330..705659(-)	frameshift,internal_stop_codon	705696..705698(-)	705440	WP_013447641.1	translation elongation factor 4	70.6	12.8	71.4
MGA_1101	LOCUS_11010	sequence1:705696..706475(-)	frameshift,internal_stop_codon	705696..705698(-)	705443	WP_013447641.1	translation elongation factor 4	100.0	43.2	78.4
MGA_1103	LOCUS_11030	sequence1:707121..707537(-)	internal_stop_codon	707571..707573(-)		WP_014584346.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	19.2	87.7
MGA_1104	LOCUS_11040	sequence1:707571..709280(-)	internal_stop_codon	707571..707573(-)		WP_011183426.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	100.0	79.2	71.8
MGA_1106	LOCUS_11060	sequence1:709766..710248(-)	internal_stop_codon	710345..710347(-),709766..709768(-)		WP_011183428.1	class 1b ribonucleoside-diphosphate reductase subunit beta	100.0	47.1	85.6
MGA_1111	LOCUS_11110	sequence1:713895..714215(-)	internal_stop_codon	713673..713675(-),713895..713897(-),714261..714263(-)		WP_226990850.1	sodium-dependent transporter	84.9	18.0	35.6
MGA_1113	LOCUS_11130	sequence1:714968..715447(-)	partial			WP_011183231.1	riboflavin kinase	98.1	57.7	32.9
MGA_1118	LOCUS_11180	sequence1:718138..718626(-)	internal_stop_codon	718648..718650(-),718819..718821(-)		WP_010880496.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	87.0	35.8	39.0
MGA_1125	LOCUS_11250	sequence1:721898..722947(-)	internal_stop_codon	723095..723097(-),723056..723058(-)		WP_001985392.1	formate--tetrahydrofolate ligase	98.3	61.7	38.2
MGA_1126	LOCUS_11260	sequence1:723095..723502(-)	internal_stop_codon	723095..723097(-),723056..723058(-)		WP_000845308.1	formate--tetrahydrofolate ligase	100.0	24.6	54.0
MGA_1129	LOCUS_11290	sequence1:725576..726058(-)	frameshift		726137,726047	WP_011860736.1	ABC transporter ATP-binding protein	83.8	60.4	38.1
MGA_1136	LOCUS_11360	sequence1:729433..729708(-)	partial			WP_011183040.1	cytidine deaminase	98.9	66.7	57.8
MGA_1148	LOCUS_11480	sequence1:734887..735447(+)	internal_stop_codon	735445..735447(+)		WP_011166261.1	GMP reductase	100.0	58.1	69.9
MGA_1149	LOCUS_11490	sequence1:735460..735849(+)	internal_stop_codon	735445..735447(+)		WP_011183067.1	GMP reductase	100.0	40.3	80.6
MGA_1156	LOCUS_11560	sequence1:740008..740196(-)	internal_stop_codon	740458..740460(-),740218..740220(-),740008..740010(-),740296..740298(-),739975..739977(-)		WP_003131609.1	L-lactate dehydrogenase	98.4	19.4	59.0
MGA_1157	LOCUS_11570	sequence1:740642..740857(-)	frameshift,internal_stop_codon	740458..740460(-),740557..740559(-),740521..740523(-)	740677	WP_011183494.1	L-lactate dehydrogenase	80.3	18.0	56.1
MGA_1164	LOCUS_11640	sequence1:744303..744692(-)	partial			WP_011387629.1	ABC transporter ATP-binding protein	86.0	47.9	39.3
MGA_1170	LOCUS_11700	sequence1:747301..747585(-)	internal_stop_codon	747301..747303(-)		WP_011166276.1	hypothetical protein	93.6	31.8	35.2
MGA_1172	LOCUS_11720	sequence1:748039..749145(-)	internal_stop_codon	748039..748041(-)		WP_011166653.1	DEAD/DEAH box helicase	99.2	81.2	51.9
MGA_1179	LOCUS_11790	sequence1:752022..752249(-)	frameshift,internal_stop_codon	752336..752338(-),752525..752527(-),752522..752524(-)	752410,752044	WP_003596501.1	L-ribulose-5-phosphate 4-epimerase	88.0	27.3	43.9
MGA_1180	LOCUS_11800	sequence1:752938..753102(-)	frameshift,internal_stop_codon	752937..752939(-),752757..752759(-),753114..753116(-)	753221	WP_002386621.1	L-ribulose-5-phosphate 3-epimerase	98.1	18.5	54.7
MGA_1181	LOCUS_11810	sequence1:753198..753509(-)	frameshift,internal_stop_codon	753522..753524(-),753790..753792(-),753721..753723(-),753513..753515(-),753114..753116(-)	753212,753702	WP_002292381.1	L-ribulose-5-phosphate 3-epimerase	93.2	19.4	44.3
MGA_1182	LOCUS_11820	sequence1:753522..753746(-)	frameshift,internal_stop_codon	753790..753792(-),753943..753945(-),753814..753816(-)	753726	WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	78.4	26.6	53.4
MGA_1184	LOCUS_11840	sequence1:753943..754164(-)	frameshift,internal_stop_codon	753790..753792(-),753943..753945(-),753814..753816(-)	753726	WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	97.3	32.6	60.6
MGA_1197	LOCUS_11970	sequence1:762514..762762(-)	internal_stop_codon	762781..762783(-),762514..762516(-)		WP_011183542.1	ABC transporter ATP-binding protein	100.0	35.5	43.4
MGA_1198	LOCUS_11980	sequence1:762781..763023(-)	partial			WP_045053120.1	LPS export ABC transporter ATP-binding protein	87.5	29.8	45.8
MGA_1207	LOCUS_12070	sequence1:769478..769798(+)	internal_stop_codon	769796..769798(+)		WP_010990127.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	99.1	31.1	39.3
MGA_1208	LOCUS_12080	sequence1:769895..770359(+)	internal_stop_codon	769796..769798(+)		WP_010990127.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	94.2	42.6	40.4
MGA_1209	LOCUS_12090	sequence1:770535..770879(-)	internal_stop_codon	770535..770537(-)		WP_011166652.1	Nif3-like dinuclear metal center hexameric protein	99.1	44.2	31.6
MGA_1211	LOCUS_12110	sequence1:771806..772462(-)	internal_stop_codon	772529..772531(-),772526..772528(-)		WP_020862729.1	sigma-70 family RNA polymerase sigma factor	100.0	43.1	67.6
MGA_1212	LOCUS_12120	sequence1:772529..773164(-)	internal_stop_codon	772529..772531(-),772526..772528(-)		WP_011183167.1	sigma-70 family RNA polymerase sigma factor	99.1	48.0	51.8
MGA_1214	LOCUS_12140	sequence1:775041..775421(-)	internal_stop_codon	775560..775562(-),775710..775712(-)		WP_011166648.1	glycine--tRNA ligase	97.6	27.0	58.5
MGA_1215	LOCUS_12150	sequence1:775560..775688(-)	internal_stop_codon	775560..775562(-),775710..775712(-)		WP_001030080.1	glycine--tRNA ligase	100.0	9.1	50.0
MGA_1216	LOCUS_12160	sequence1:775710..775976(-)	internal_stop_codon	776268..776270(-),775560..775562(-),776196..776198(-),776073..776075(-),775710..775712(-)		WP_011166648.1	glycine--tRNA ligase	100.0	19.3	88.6
MGA_1219	LOCUS_12190	sequence1:777246..777545(-)	internal_stop_codon	777726..777728(-)		WP_002359745.1	GTPase Era	100.0	33.3	50.0
MGA_1220	LOCUS_12200	sequence1:777726..778142(-)	internal_stop_codon	777726..777728(-)		WP_011183163.1	GTPase Era	100.0	46.2	54.7
MGA_1222	LOCUS_12220	sequence1:779469..779921(-)	internal_stop_codon	780066..780068(-),779991..779993(-)		WP_011166548.1	PolC-type DNA polymerase III	100.0	9.9	48.3
MGA_1223	LOCUS_12230	sequence1:780066..780194(-)	internal_stop_codon	780066..780068(-),779991..779993(-),780270..780272(-)		WP_011986794.1	PolC-type DNA polymerase III	95.2	2.8	67.5
MGA_1224	LOCUS_12240	sequence1:780270..780566(-)	internal_stop_codon	780066..780068(-),780270..780272(-),780606..780608(-),779991..779993(-)		WP_011183185.1	PolC-type DNA polymerase III	100.0	6.6	73.5
MGA_1225	LOCUS_12250	sequence1:780606..781166(-)	internal_stop_codon	780606..780608(-),781230..781232(-)		WP_011166548.1	PolC-type DNA polymerase III	100.0	12.6	67.9
MGA_1226	LOCUS_12260	sequence1:781230..782258(-)	internal_stop_codon	782307..782309(-),781230..781232(-)		WP_011166548.1	PolC-type DNA polymerase III	100.0	23.6	52.0
MGA_1227	LOCUS_12270	sequence1:782307..782585(-)	internal_stop_codon	782307..782309(-),782610..782612(-),782778..782780(-)		WP_011183185.1	PolC-type DNA polymerase III	100.0	6.2	51.1
MGA_1232	LOCUS_12320	sequence1:784892..785194(-)	internal_stop_codon	784892..784894(-),784778..784780(-)		WP_011183184.1	site-2 protease family protein	82.0	19.9	56.0
MGA_1233	LOCUS_12330	sequence1:785231..785779(-)	internal_stop_codon	785783..785785(-)		WP_011861463.1	1-deoxy-D-xylulose-5-phosphate reductoisomerase	98.9	47.4	42.6
MGA_1234	LOCUS_12340	sequence1:785783..786151(-)	internal_stop_codon	785783..785785(-),786209..786211(-)		WP_008766370.1	1-deoxy-D-xylulose-5-phosphate reductoisomerase	92.6	29.2	46.1
MGA_1236	LOCUS_12360	sequence1:787541..787777(-)	internal_stop_codon	787541..787543(-),787862..787864(-),787967..787969(-)		WP_011964194.1	isoprenyl transferase	94.9	32.1	57.0
MGA_1238	LOCUS_12380	sequence1:788556..788987(-)	internal_stop_codon	788556..788558(-),788469..788471(-),788553..788555(-)		WP_011166321.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	89.5	48.1	50.0
MGA_1239	LOCUS_12390	sequence1:789096..789269(-)	internal_stop_codon	789291..789293(-)		WP_011705096.1	ribosome recycling factor	100.0	32.4	48.3
MGA_1240	LOCUS_12400	sequence1:789291..789644(-)	internal_stop_codon	789291..789293(-)		WP_010947438.1	ribosome recycling factor	98.3	62.2	47.0
MGA_1245	LOCUS_12450	sequence1:795263..795628(-)	internal_stop_codon	795263..795265(-),795209..795211(-)		WP_011020219.1	ferritin	95.0	62.3	23.5
MGA_1247	LOCUS_12470	sequence1:796608..796856(-)	frameshift,internal_stop_codon	796608..796610(-)	796379	WP_003588846.1	NADH-dependent flavin oxidoreductase	87.8	18.9	49.3
MGA_1252	LOCUS_12520	sequence1:799418..799837(-)	frameshift,internal_stop_codon	799922..799924(-),799949..799951(-),799426..799428(-)	799444,800036	WP_000195485.1	formate C-acetyltransferase	97.8	18.3	65.0
MGA_1253	LOCUS_12530	sequence1:800034..800192(-)	frameshift,internal_stop_codon	800256..800258(-),799922..799924(-),799949..799951(-)	800036	WP_000195485.1	formate C-acetyltransferase	100.0	6.9	80.8
MGA_1254	LOCUS_12540	sequence1:800256..800453(-)	frameshift,internal_stop_codon	800720..800722(-),800609..800611(-),800522..800524(-),800663..800665(-),800255..800257(-)	800674	WP_005653814.1	formate C-acetyltransferase	100.0	8.4	70.8
MGA_1255	LOCUS_12550	sequence1:800720..800899(-)	frameshift,internal_stop_codon	800660..800662(-),800606..800608(-),800519..800521(-),800717..800719(-)	801160,801001,800674,801163	WP_003721911.1	formate C-acetyltransferase	96.6	7.8	62.1
MGA_1256	LOCUS_12560	sequence1:800965..801168(-)	frameshift,internal_stop_codon	801206..801208(-),800717..800719(-)	801160,801010,801242,801163	WP_003565434.1	formate C-acetyltransferase	80.6	7.2	64.8
MGA_1258	LOCUS_12580	sequence1:802965..803402(-)	internal_stop_codon	803502..803504(-)		WP_011166487.1	ribosome biogenesis GTP-binding protein YihA/YsxC	98.6	73.0	51.0
MGA_1265	LOCUS_12650	sequence1:806407..806628(-)	internal_stop_codon	806908..806910(-),806632..806634(-),806407..806409(-)		WP_010896089.1	leucyl aminopeptidase	94.5	13.6	43.5
MGA_1266	LOCUS_12660	sequence1:806632..806886(-)	internal_stop_codon	806632..806634(-),806908..806910(-),807007..807009(-),806407..806409(-)		WP_011182968.1	M17 family metallopeptidase	98.8	18.1	54.2
MGA_1267	LOCUS_12670	sequence1:808109..808489(+)	frameshift,internal_stop_codon	808046..808048(+),808007..808009(+),808530..808532(+)	808468	WP_008764891.1	pyridoxal phosphate-dependent aminotransferase	94.4	43.6	27.4
MGA_1268	LOCUS_12680	sequence1:808737..809156(-)	partial			WP_011182967.1	M17 family metallopeptidase	95.7	30.1	32.6
MGA_1270	LOCUS_12700	sequence1:810584..810850(-)	internal_stop_codon	810860..810862(-)		WP_020862797.1	M20 family metallopeptidase	96.6	18.9	71.8
MGA_1271	LOCUS_12710	sequence1:810860..811444(-)	internal_stop_codon	810860..810862(-),811640..811642(-)		WP_020862797.1	M20 family metallopeptidase	95.9	41.9	43.6
MGA_1272	LOCUS_12720	sequence1:811640..811933(-)	internal_stop_codon	811640..811642(-)		WP_020862797.1	M20 family metallopeptidase	97.9	21.2	47.4
MGA_1274	LOCUS_12740	sequence1:812550..813110(-)	internal_stop_codon	812550..812552(-),812367..812369(-)		WP_004398764.1	radical SAM family heme chaperone HemW	98.9	49.3	41.0
MGA_1286	LOCUS_12860	sequence1:823410..823595(-)	internal_stop_codon	823659..823661(-)		WP_207253450.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	95.1	13.7	56.9
MGA_1287	LOCUS_12870	sequence1:823659..824441(-)	internal_stop_codon	823659..823661(-),824442..824444(-)		WP_207253450.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	98.8	60.9	47.3
MGA_1289	LOCUS_12890	sequence1:824681..825163(-)	partial			WP_011183092.1	guanylate kinase	97.5	52.5	55.8
MGA_1292	LOCUS_12920	sequence1:827939..828538(+)	internal_stop_codon	828536..828538(+)		WP_011166843.1	ribonuclease J	84.4	27.5	78.0
MGA_1293	LOCUS_12930	sequence1:828581..829324(+)	internal_stop_codon	829322..829324(+),828536..828538(+)		WP_011166843.1	ribonuclease J	100.0	40.5	66.8
MGA_1294	LOCUS_12940	sequence1:829412..829705(+)	internal_stop_codon	829322..829324(+)		WP_011183468.1	ribonuclease J	100.0	16.5	76.3
MGA_1297	LOCUS_12970	sequence1:830951..831223(-)	internal_stop_codon	830903..830905(-),830951..830953(-)		WP_011183393.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	88.9	59.7	55.4
MGA_1298	LOCUS_12980	sequence1:831402..831830(+)	internal_stop_codon	831828..831830(+),831387..831389(+)		WP_001974160.1	NAD(P)/FAD-dependent oxidoreductase	95.1	40.5	40.9
MGA_1300	LOCUS_13000	sequence1:833326..833745(-)	frameshift,internal_stop_codon	833766..833768(-),833166..833168(-),833298..833300(-),833814..833816(-),833325..833327(-)	833907,833804	WP_011183460.1	transporter	100.0	21.6	36.5
MGA_1301	LOCUS_13010	sequence1:833857..834228(-)	frameshift,internal_stop_codon	833766..833768(-),833814..833816(-)	833907,833804	WP_011183460.1	transporter	87.8	15.7	38.0
MGA_1308	LOCUS_13080	sequence1:837118..837672(-)	internal_stop_codon	837730..837732(-)		WP_011183400.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	100.0	34.8	64.9
MGA_1309	LOCUS_13090	sequence1:837730..838518(-)	internal_stop_codon	838540..838542(-),837730..837732(-),838651..838653(-),838585..838587(-)		WP_011166985.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	100.0	50.1	47.0
MGA_1310	LOCUS_13100	sequence1:839015..839326(-)	partial			WP_011183401.1	Cof-type HAD-IIB family hydrolase	89.3	33.7	35.9
MGA_1316	LOCUS_13160	sequence1:842885..843757(-)	frameshift,internal_stop_codon	843785..843787(-)	843832,843787,843844	WP_011166605.1	recombinase RecA	55.9	46.7	56.8
MGA_1317	LOCUS_13170	sequence1:843821..843988(-)	frameshift,internal_stop_codon	843785..843787(-)	843832,843787,843844	WP_011166605.1	recombinase RecA	85.5	13.6	57.4
MGA_1319	LOCUS_13190	sequence1:844859..845020(+)	internal_stop_codon	845210..845212(+),845108..845110(+),845225..845227(+),845018..845020(+),844784..844786(+)		WP_020863053.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	100.0	26.8	60.4
MGA_1321	LOCUS_13210	sequence1:845706..845963(+)	internal_stop_codon	845961..845963(+),845664..845666(+),846126..846128(+)		WP_000167663.1	SDR family oxidoreductase	100.0	31.8	43.5
MGA_1332	LOCUS_13320	sequence1:854366..854692(-)	partial			WP_118838319.1	DivIVA domain-containing protein	85.2	23.1	31.5
MGA_1338	LOCUS_13380	sequence1:858409..858849(-)	internal_stop_codon	858409..858411(-)		WP_013098856.1	Gfo/Idh/MocA family oxidoreductase	94.5	41.9	42.1
MGA_1342	LOCUS_13420	sequence1:860321..860515(-)	internal_stop_codon	860663..860665(-)		WP_010964597.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	93.8	24.0	41.7
MGA_1343	LOCUS_13430	sequence1:860663..861040(-)	internal_stop_codon	860663..860665(-)		WP_011016991.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	84.0	45.5	26.2
MGA_1346	LOCUS_13460	sequence1:862904..863461(-)	partial			WP_009892118.1	ECF transporter S component	56.8	49.5	38.1
MGA_1348	LOCUS_13480	sequence1:864215..864346(-)	internal_stop_codon	864443..864445(-)		WP_000103955.1	phosphopyruvate hydratase	86.0	8.6	70.3
MGA_1349	LOCUS_13490	sequence1:864443..864733(-)	internal_stop_codon	864443..864445(-),864737..864739(-),864947..864949(-)		WP_011166450.1	phosphopyruvate hydratase	100.0	21.3	64.6
MGA_1350	LOCUS_13500	sequence1:865046..865483(-)	internal_stop_codon	865511..865513(-),864947..864949(-),865046..865048(-)		WP_011183366.1	phosphopyruvate hydratase	98.6	31.6	76.2
MGA_1354	LOCUS_13540	sequence1:868956..869141(-)	frameshift,internal_stop_codon	869288..869290(-)	869146	WP_011166584.1	PTS ascorbate-specific subunit IIBC	95.1	9.6	69.0
MGA_1355	LOCUS_13550	sequence1:869288..869581(-)	frameshift,internal_stop_codon	869795..869797(-),869777..869779(-),869287..869289(-)	869145,869634,869758	WP_011166584.1	PTS ascorbate-specific subunit IIBC	99.0	15.9	55.2
MGA_1356	LOCUS_13560	sequence1:869623..869802(-)	frameshift,internal_stop_codon	869795..869797(-),870017..870019(-),869777..869779(-)	869637,869758	WP_011166584.1	PTS ascorbate-specific subunit IIBC	76.3	7.5	73.3
MGA_1358	LOCUS_13580	sequence1:870088..870450(-)	internal_stop_codon	870478..870480(-)		WP_011166583.1	PTS sugar transporter subunit IIA	100.0	81.9	41.8
MGA_1361	LOCUS_13610	sequence1:872467..872718(-)	internal_stop_codon	872728..872730(-),872953..872955(-),872836..872838(-)		WP_011476514.1	aldo/keto reductase	100.0	30.1	46.4
MGA_1362	LOCUS_13620	sequence1:873049..873291(-)	internal_stop_codon	873049..873051(-),872953..872955(-),872836..872838(-)		WP_001099678.1	aldo/keto reductase	88.8	25.4	59.2
MGA_1363	LOCUS_13630	sequence1:873362..873880(-)	internal_stop_codon	874058..874060(-)		WP_011166467.1	acetate kinase	98.3	43.0	52.4
MGA_1364	LOCUS_13640	sequence1:874058..874591(-)	internal_stop_codon	874058..874060(-)		WP_000040065.1	acetate kinase	92.7	40.8	51.8
MGA_1365	LOCUS_13650	sequence1:874572..874763(-)	internal_stop_codon	874902..874904(-)		WP_011182940.1	phosphate acetyltransferase	88.9	17.4	67.9
MGA_1366	LOCUS_13660	sequence1:874902..875216(-)	internal_stop_codon	875223..875225(-),874902..874904(-)		WP_011182940.1	phosphate acetyltransferase	100.0	32.3	55.8
MGA_1367	LOCUS_13670	sequence1:875223..875543(-)	internal_stop_codon	875223..875225(-)		WP_010874784.1	phosphate acetyltransferase	98.1	32.8	35.8
MGA_1369	LOCUS_13690	sequence1:876457..877362(-)	internal_stop_codon	877426..877428(-)		WP_003229412.1	DNA polymerase III subunit alpha	98.3	26.5	29.3
MGA_1370	LOCUS_13700	sequence1:877426..878886(-)	internal_stop_codon	878977..878979(-),877426..877428(-)		WP_011183481.1	DNA polymerase III subunit alpha	97.3	48.3	50.8
MGA_1372	LOCUS_13720	sequence1:879214..879504(-)	partial			WP_010896021.1	DNA polymerase III subunit alpha	95.8	8.3	36.5
MGA_1377	LOCUS_13770	sequence1:883759..884268(-)	internal_stop_codon	884344..884346(-)		WP_011166981.1	glucosamine-6-phosphate deaminase	92.9	63.5	59.2
MGA_1386	LOCUS_13860	sequence1:891456..891905(-)	frameshift,internal_stop_codon	892031..892033(-),891973..891975(-),891919..891921(-)	891912,892107,892100,892021	WP_011166334.1	PTS transporter subunit EIIC	53.7	14.5	51.9
MGA_1389	LOCUS_13890	sequence1:893071..893283(-)	frameshift,internal_stop_codon	893314..893316(-),893071..893073(-)	892947,892871	WP_011263815.1	SIS domain-containing protein	64.3	11.3	57.8
MGA_1390	LOCUS_13900	sequence1:893314..893541(-)	internal_stop_codon	893551..893553(-),893071..893073(-),893314..893316(-),893635..893637(-)		WP_002357242.1	SIS domain-containing protein	97.3	19.7	49.4
MGA_1392	LOCUS_13920	sequence1:894145..894681(+)	internal_stop_codon	894109..894111(+)		WP_010966238.1	DeoR/GlpR family DNA-binding transcription regulator	91.6	63.8	34.1
MGA_1394	LOCUS_13940	sequence1:895853..896410(-)	internal_stop_codon	896426..896428(-)		WP_011166502.1	ribulose-phosphate 3-epimerase	98.9	81.8	49.5
MGA_1395	LOCUS_13950	sequence1:896529..896819(-)	partial			WP_010906200.1	ribosome small subunit-dependent GTPase A	96.9	30.3	41.9
MGA_1396	LOCUS_13960	sequence1:896949..897410(-)	internal_stop_codon	896949..896951(-)		WP_001162036.1	ribosome small subunit-dependent GTPase A	95.4	49.3	43.0
MGA_1397	LOCUS_13970	sequence1:897416..898426(-)	partial			WP_002287377.1	Stk1 family PASTA domain-containing Ser/Thr kinase	81.2	39.6	41.0
MGA_1398	LOCUS_13980	sequence1:898949..899125(-)	internal_stop_codon	899195..899197(-)		WP_011183117.1	protein phosphatase 2C domain-containing protein	98.3	22.4	49.1
MGA_1399	LOCUS_13990	sequence1:899195..899443(-)	internal_stop_codon	899501..899503(-),899195..899197(-)		WP_011183117.1	protein phosphatase 2C domain-containing protein	100.0	32.3	40.2
MGA_1400	LOCUS_14000	sequence1:899501..899707(-)	internal_stop_codon	899501..899503(-)		WP_011166505.1	protein phosphatase 2C domain-containing protein	97.1	46.8	42.4
MGA_1402	LOCUS_14020	sequence1:900898..901359(-)	internal_stop_codon	901360..901362(-)		WP_020862982.1	PTS transporter subunit EIIC	97.4	20.0	52.7
MGA_1403	LOCUS_14030	sequence1:901360..901992(-)	internal_stop_codon	902011..902013(-),901360..901362(-),902281..902283(-),902128..902130(-),902014..902016(-)		WP_011183111.1	PTS transporter subunit EIIC	69.0	20.6	67.1
MGA_1404	LOCUS_14040	sequence1:902494..902772(-)	internal_stop_codon	902797..902799(-),902281..902283(-)		WP_011183111.1	PTS transporter subunit EIIC	54.3	7.1	64.0
MGA_1405	LOCUS_14050	sequence1:902797..902922(-)	internal_stop_codon	902797..902799(-)		WP_020862982.1	PTS transporter subunit EIIC	97.6	5.4	70.0
MGA_1408	LOCUS_14080	sequence1:904869..905189(-)	frameshift,internal_stop_codon	905205..905207(-)	905299,905244	WP_010966161.1	metal ABC transporter ATP-binding protein	83.0	40.9	41.1
MGA_1410	LOCUS_14100	sequence1:905593..906018(-)	frameshift		905986	WP_011183192.1	translation initiation factor IF-2	92.9	20.8	68.7
MGA_1411	LOCUS_14110	sequence1:905978..907447(-)	frameshift		905992	WP_011183192.1	translation initiation factor IF-2	98.0	77.1	58.4
MGA_1413	LOCUS_14130	sequence1:907874..908044(-)	internal_stop_codon	907874..907876(-)		WP_009967250.1	glucose-induced regulator RulR	89.3	54.9	64.0
MGA_1415	LOCUS_14150	sequence1:908488..909495(-)	internal_stop_codon	908431..908433(-),908488..908490(-)		WP_011166545.1	transcription termination factor NusA	100.0	57.5	43.5
MGA_1416	LOCUS_14160	sequence1:910263..910493(-)	frameshift,internal_stop_codon	910529..910531(-)	910570	WP_011861381.1	class I SAM-dependent methyltransferase	100.0	31.1	59.2
MGA_1418	LOCUS_14180	sequence1:911794..912246(-)	internal_stop_codon	912259..912261(-),912307..912309(-)		WP_011183141.1	HD domain-containing protein	97.3	46.9	51.0
MGA_1421	LOCUS_14210	sequence1:912796..913173(-)	internal_stop_codon	913213..913215(-)		WP_205421581.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	88.8	17.9	32.2
MGA_1423	LOCUS_14230	sequence1:914743..915012(-)	internal_stop_codon	915142..915144(-),915286..915288(-)		WP_011183017.1	phospho-sugar mutase	94.4	15.0	56.0
MGA_1424	LOCUS_14240	sequence1:915142..915273(-)	internal_stop_codon	915142..915144(-),915286..915288(-)		WP_011166989.1	phospho-sugar mutase	100.0	7.7	58.1
MGA_1425	LOCUS_14250	sequence1:915286..916416(-)	internal_stop_codon	915142..915144(-),915286..915288(-)		WP_011166989.1	phospho-sugar mutase	97.6	65.4	48.8
MGA_1426	LOCUS_14260	sequence1:916554..917000(-)	internal_stop_codon	917019..917021(-)		WP_011166672.1	phosphate signaling complex protein PhoU	91.9	60.7	38.2
MGA_1428	LOCUS_14280	sequence1:917229..917495(-)	internal_stop_codon	917583..917585(-)		WP_011166671.1	phosphate ABC transporter ATP-binding protein PstB	100.0	37.9	70.5
MGA_1429	LOCUS_14290	sequence1:917583..918038(-)	internal_stop_codon	917583..917585(-)		WP_164704003.1	phosphate ABC transporter ATP-binding protein PstB	87.4	49.4	60.6
MGA_1431	LOCUS_14310	sequence1:918336..918836(-)	frameshift,internal_stop_codon	918923..918925(-),918336..918338(-),918335..918337(-)	919051	WP_011183131.1	phosphate ABC transporter permease PstA	100.0	23.2	55.4
MGA_1432	LOCUS_14320	sequence1:918924..919640(-)	internal_stop_codon	918924..918926(-),919842..919844(-)		WP_011183131.1	phosphate ABC transporter permease PstA	99.2	34.0	45.7
MGA_1437	LOCUS_14370	sequence1:921523..922869(-)	frameshift		923119	WP_011183129.1	AAA family ATPase	100.0	46.0	41.5
MGA_1438	LOCUS_14380	sequence1:923111..924310(-)	frameshift,internal_stop_codon	924329..924331(-)	923122	WP_011183129.1	AAA family ATPase	99.2	40.2	36.1
MGA_1439	LOCUS_14390	sequence1:924329..924469(-)	internal_stop_codon	924329..924331(-)		WP_011183129.1	AAA family ATPase	100.0	4.6	73.9
MGA_1440	LOCUS_14400	sequence1:924719..925135(-)	internal_stop_codon	924719..924721(-),925358..925360(-)		WP_011017155.1	glutamine-hydrolyzing GMP synthase	98.6	26.6	70.6
MGA_1441	LOCUS_14410	sequence1:925547..925747(-)	internal_stop_codon	925358..925360(-),926033..926035(-),925547..925549(-),925748..925750(-)		WP_011183239.1	glutamine-hydrolyzing GMP synthase	100.0	12.9	54.5
MGA_1442	LOCUS_14420	sequence1:925748..925900(-)	internal_stop_codon	926033..926035(-),925547..925549(-),925748..925750(-)		WP_012545424.1	glutamine-hydrolyzing GMP synthase	92.0	9.0	65.2
MGA_1443	LOCUS_14430	sequence1:926133..926657(-)	partial			WP_003723741.1	bifunctional tRNA lysidine(34) synthetase TilS/hypoxanthine phosphoribosyltransferase HprT	100.0	27.0	43.2
MGA_1447	LOCUS_14470	sequence1:928709..929062(-)	partial			WP_011183433.1	DNA-processing protein DprA	100.0	44.0	42.7
MGA_1450	LOCUS_14500	sequence1:930902..931354(-)	internal_stop_codon	930902..930904(-),930851..930853(-),930746..930748(-)		WP_011674494.1	ribosome biogenesis GTPase YlqF	100.0	52.4	50.0
MGA_1459	LOCUS_14590	sequence1:934467..934634(-)	internal_stop_codon	934467..934469(-)		WP_011166609.1	30S ribosomal protein S16	100.0	50.9	65.5
MGA_1460	LOCUS_14600	sequence1:935581..936162(-)	internal_stop_codon	936355..936357(-),935581..935583(-),936259..936261(-)		WP_011166850.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	58.9	65.5
MGA_1461	LOCUS_14610	sequence1:936355..936513(-)	internal_stop_codon	936355..936357(-),936259..936261(-)		WP_010874786.1	type I glyceraldehyde-3-phosphate dehydrogenase	96.2	14.8	68.0
MGA_1467	LOCUS_14670	sequence1:939861..940808(-)	frameshift,internal_stop_codon	940100..940102(-),940073..940075(-),940067..940069(-),939860..939862(-)	940202,940045	WP_011166852.1	DnaD domain protein	99.0	80.5	25.0
MGA_1469	LOCUS_14690	sequence1:941330..941731(-)	internal_stop_codon	941225..941227(-),941330..941332(-),941243..941245(-),941324..941326(-),941261..941263(-)		WP_011182958.1	folate family ECF transporter S component	98.5	56.7	39.7
MGA_1470	LOCUS_14700	sequence1:941878..942519(-)	internal_stop_codon	941836..941838(-),942526..942528(-),941878..941880(-)		WP_011167091.1	Mur ligase family protein	97.7	55.3	41.7
MGA_1471	LOCUS_14710	sequence1:942526..942861(-)	internal_stop_codon	942526..942528(-)		WP_011182957.1	Mur ligase family protein	100.0	30.2	52.7
MGA_1472	LOCUS_14720	sequence1:942870..943673(-)	internal_stop_codon	943734..943736(-)		WP_011182956.1	excinuclease ABC subunit UvrA	98.9	27.7	74.2
MGA_1473	LOCUS_14730	sequence1:943734..944663(-)	internal_stop_codon	944739..944741(-),943734..943736(-)		WP_011182956.1	excinuclease ABC subunit UvrA	99.0	32.1	61.8
MGA_1474	LOCUS_14740	sequence1:944739..945710(-)	internal_stop_codon	944739..944741(-)		WP_011182956.1	excinuclease ABC subunit UvrA	99.4	34.0	70.0
MGA_1477	LOCUS_14770	sequence1:947161..947628(-)	internal_stop_codon	947632..947634(-),947161..947163(-)		WP_164919794.1	triose-phosphate isomerase	100.0	62.5	56.8
MGA_1478	LOCUS_14780	sequence1:948167..948634(-)	internal_stop_codon	948749..948751(-)		WP_011182963.1	DNA-binding protein WhiA	97.4	47.6	44.7
MGA_1479	LOCUS_14790	sequence1:948749..949102(-)	internal_stop_codon	948749..948751(-)		WP_011182963.1	DNA-binding protein WhiA	96.6	35.3	32.7
MGA_1481	LOCUS_14810	sequence1:949382..951523(-)	internal_stop_codon	949382..949384(-)		WP_011166299.1	preprotein translocase subunit SecA	99.6	75.2	62.8
MGA_1483	LOCUS_14830	sequence1:952292..952609(-)	internal_stop_codon	952649..952651(-)		WP_011183322.1	ABC transporter B family permease/ATP-binding protein	96.2	16.6	75.5
MGA_1484	LOCUS_14840	sequence1:952649..953140(-)	internal_stop_codon	952649..952651(-),953156..953158(-)		WP_011183322.1	ABC transporter B family permease/ATP-binding protein	96.9	26.1	61.2
MGA_1485	LOCUS_14850	sequence1:953156..953548(-)	internal_stop_codon	953156..953158(-),953567..953569(-)		WP_011166618.1	ABC transporter ATP-binding protein	82.3	16.9	34.6
MGA_1486	LOCUS_14860	sequence1:953567..953791(-)	internal_stop_codon	953567..953569(-)		WP_011183432.1	ABC transporter ATP-binding protein	78.4	8.8	41.4
MGA_1488	LOCUS_14880	sequence1:954348..954578(-)	internal_stop_codon	954588..954590(-)		WP_001829665.1	phosphoglycerate kinase	100.0	19.2	73.7
MGA_1489	LOCUS_14890	sequence1:954588..955010(-)	internal_stop_codon	954588..954590(-),955122..955124(-)		WP_011183475.1	phosphoglycerate kinase	99.3	34.2	66.9
MGA_1490	LOCUS_14900	sequence1:955122..955583(-)	internal_stop_codon	955122..955124(-)		WP_011183475.1	phosphoglycerate kinase	98.7	34.7	57.6
MGA_1492	LOCUS_14920	sequence1:956599..956877(-)	internal_stop_codon	957130..957132(-)		WP_011167088.1	prolipoprotein diacylglyceryl transferase	89.1	15.6	42.7
MGA_1495	LOCUS_14950	sequence1:958837..960189(-)	internal_stop_codon	960193..960195(-)		WP_164919771.1	excinuclease ABC subunit UvrB	98.9	66.9	64.3
MGA_1496	LOCUS_14960	sequence1:960193..960801(-)	internal_stop_codon	960193..960195(-)		WP_164919771.1	excinuclease ABC subunit UvrB	99.5	30.1	71.1
MGA_1505	LOCUS_15050	sequence1:965288..965641(-)	internal_stop_codon	965288..965290(-)		WP_026199035.1	ribose 5-phosphate isomerase B	94.0	73.8	62.7
MGA_1512	LOCUS_15120	sequence1:968494..968787(-)	internal_stop_codon	968821..968823(-)		WP_011166265.1	PTS transporter subunit EIIC	97.9	15.9	46.9
MGA_1513	LOCUS_15130	sequence1:968821..969189(-)	internal_stop_codon	968821..968823(-),969259..969261(-),969334..969336(-)		WP_011166265.1	PTS transporter subunit EIIC	98.4	20.7	65.8
MGA_1515	LOCUS_15150	sequence1:969619..970167(-)	internal_stop_codon	969619..969621(-),970177..970179(-),969334..969336(-),970201..970203(-)		WP_011166265.1	PTS transporter subunit EIIC	99.5	31.6	53.0
MGA_1516	LOCUS_15160	sequence1:970392..970994(-)	internal_stop_codon	970347..970349(-),970392..970394(-)		WP_011166737.1	N-acetylmannosamine-6-phosphate 2-epimerase	94.5	83.2	64.0
MGA_1519	LOCUS_15190	sequence1:972235..973929(-)	internal_stop_codon	972235..972237(-),974059..974061(-)		WP_011167023.1	magnesium-translocating P-type ATPase	97.9	60.0	60.7
MGA_1520	LOCUS_15200	sequence1:974059..974412(-)	internal_stop_codon	974455..974457(-),974059..974061(-)		WP_011167023.1	magnesium-translocating P-type ATPase	96.6	13.2	47.6
MGA_1525	LOCUS_15250	sequence1:977346..977945(-)	internal_stop_codon	978018..978020(-),978228..978230(-)		WP_002286405.1	tyrosine--tRNA ligase	97.5	46.4	48.5
MGA_1526	LOCUS_15260	sequence1:978018..978191(-)	internal_stop_codon	978018..978020(-),978228..978230(-)		WP_011183485.1	tyrosine--tRNA ligase	100.0	13.8	71.9
MGA_1527	LOCUS_15270	sequence1:978228..978428(-)	internal_stop_codon	978018..978020(-),978558..978560(-),978228..978230(-)		WP_011166856.1	tyrosine--tRNA ligase	95.5	15.2	52.4
MGA_1534	LOCUS_15340	sequence1:982844..983635(-)	internal_stop_codon	983660..983662(-)		WP_001076673.1	M42 family metallopeptidase	92.0	69.0	39.3
MGA_1535	LOCUS_15350	sequence1:983660..983950(-)	internal_stop_codon	983660..983662(-)		WP_001031503.1	M42 family metallopeptidase	96.9	25.2	37.6
MGA_1537	LOCUS_15370	sequence1:984364..984732(+)	internal_stop_codon	984280..984282(+),984730..984732(+),984136..984138(+)		WP_011166859.1	DegV family protein	97.5	43.0	48.3
MGA_1538	LOCUS_15380	sequence1:984913..985494(+)	internal_stop_codon	985492..985494(+),985642..985644(+)		WP_020862886.1	DegV family protein	88.6	61.8	37.1
MGA_1539	LOCUS_15390	sequence1:986518..986760(-)	internal_stop_codon	986518..986520(-),986383..986385(-)		WP_011166861.1	transcriptional repressor	95.0	49.4	59.2
MGA_1543	LOCUS_15430	sequence1:988603..989214(-)	internal_stop_codon	989248..989250(-)		WP_011183374.1	proline--tRNA ligase	100.0	42.9	53.4
MGA_1544	LOCUS_15440	sequence1:989248..989490(-)	internal_stop_codon	989248..989250(-),989551..989553(-),989596..989598(-)		WP_011183374.1	proline--tRNA ligase	100.0	16.9	71.2
MGA_1545	LOCUS_15450	sequence1:989596..989736(-)	internal_stop_codon	989884..989886(-),989974..989976(-),989551..989553(-),989596..989598(-)		WP_011166523.1	proline--tRNA ligase	100.0	9.7	65.2
MGA_1547	LOCUS_15470	sequence1:990893..991876(-)	internal_stop_codon	992129..992131(-)		WP_011166358.1	cardiolipin synthase	98.8	63.3	45.9
MGA_1554	LOCUS_15540	sequence1:995513..995878(-)	internal_stop_codon	995885..995887(-)		WP_013447978.1	potassium transporter TrkG	100.0	24.4	36.9
MGA_1555	LOCUS_15550	sequence1:995885..996067(-)	internal_stop_codon	996266..996268(-),995885..995887(-),996077..996079(-)		WP_013447978.1	potassium transporter TrkG	98.3	11.1	71.2
MGA_1557	LOCUS_15570	sequence1:996458..996829(-)	internal_stop_codon	996845..996847(-),996266..996268(-),996458..996460(-),996446..996448(-)		WP_164919774.1	TrkH family potassium uptake protein	88.6	19.5	50.5
MGA_1558	LOCUS_15580	sequence1:996845..997117(-)	internal_stop_codon	996845..996847(-)		WP_164919774.1	TrkH family potassium uptake protein	87.8	11.6	44.3
MGA_1559	LOCUS_15590	sequence1:997236..997934(+)	partial			WP_011183062.1	NAD-binding protein	95.7	74.7	44.9
MGA_1560	LOCUS_15600	sequence1:998855..999421(-)	internal_stop_codon	999443..999445(-)		WP_011183060.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	97.3	38.4	42.4
MGA_1561	LOCUS_15610	sequence1:999443..1000297(-)	internal_stop_codon	999443..999445(-)		WP_015545356.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	99.6	59.3	65.5
MGA_1564	LOCUS_15640	sequence1:1002084..1002866(-)	internal_stop_codon	1002888..1002890(-)		WP_011166932.1	NAD-dependent DNA ligase LigA	99.6	38.8	50.2
MGA_1565	LOCUS_15650	sequence1:1002888..1003058(-)	internal_stop_codon	1003167..1003169(-),1003293..1003295(-),1002888..1002890(-)		WP_011393509.1	NAD-dependent DNA ligase LigA	91.1	7.7	64.7
MGA_1566	LOCUS_15660	sequence1:1003293..1003961(-)	internal_stop_codon	1004022..1004024(-),1003167..1003169(-),1003293..1003295(-)		WP_011166932.1	NAD-dependent DNA ligase LigA	100.0	33.2	56.1
MGA_1585	LOCUS_15850	sequence1:1013546..1013770(-)	internal_stop_codon	1013777..1013779(-)		WP_003722867.1	phosphoenolpyruvate--protein phosphotransferase	95.9	12.4	57.7
MGA_1586	LOCUS_15860	sequence1:1013777..1014367(-)	internal_stop_codon	1014557..1014559(-),1013777..1013779(-)		WP_000174207.1	phosphoenolpyruvate--protein phosphotransferase	100.0	34.6	74.6
MGA_1587	LOCUS_15870	sequence1:1014557..1015276(-)	internal_stop_codon	1014557..1014559(-)		WP_011166470.1	phosphoenolpyruvate--protein phosphotransferase	99.6	41.5	53.4
MGA_1591	LOCUS_15910	sequence1:1017232..1017558(-)	internal_stop_codon	1017595..1017597(-)		WP_011183505.1	50S ribosomal protein L1	98.1	46.7	58.5
MGA_1592	LOCUS_15920	sequence1:1017595..1017918(-)	internal_stop_codon	1017595..1017597(-)		WP_011183505.1	50S ribosomal protein L1	100.0	47.1	70.1
MGA_1598	LOCUS_15980	sequence1:1020880..1021170(-)	frameshift,internal_stop_codon	1021227..1021229(-)	1021448,1021417,1021377,1021257	WP_011182996.1	alpha/beta hydrolase	100.0	31.1	43.8
MGA_1599	LOCUS_15990	sequence1:1021425..1021685(-)	frameshift,internal_stop_codon	1021226..1021228(-)	1021376,1021256,1021450,1021419,1021676,1021694	WP_011182996.1	alpha/beta hydrolase	89.5	25.2	51.3
MGA_1602	LOCUS_16020	sequence1:1022288..1022446(-)	frameshift,internal_stop_codon	1022167..1022169(-),1022080..1022082(-)	1022154,1022290	WP_011167023.1	magnesium-translocating P-type ATPase	100.0	5.5	59.6
MGA_1606	LOCUS_16060	sequence1:1024690..1025199(-)	internal_stop_codon	1025296..1025298(-),1025230..1025232(-)		WP_001074405.1	Fe-S cluster assembly protein SufB	100.0	36.3	65.1
MGA_1607	LOCUS_16070	sequence1:1025296..1025949(-)	internal_stop_codon	1025950..1025952(-),1025296..1025298(-),1025230..1025232(-)		WP_002893631.1	Fe-S cluster assembly protein SufB	100.0	46.2	67.3
MGA_1610	LOCUS_16100	sequence1:1026567..1027061(-)	internal_stop_codon	1027098..1027100(-)		WP_172824500.1	cysteine desulfurase	95.7	38.0	39.9
MGA_1611	LOCUS_16110	sequence1:1027098..1027316(-)	internal_stop_codon	1027422..1027424(-),1027098..1027100(-)		WP_011166685.1	aminotransferase class V-fold PLP-dependent enzyme	100.0	17.5	62.5
MGA_1612	LOCUS_16120	sequence1:1027422..1027796(-)	internal_stop_codon	1027422..1027424(-)		WP_011183145.1	aminotransferase class V-fold PLP-dependent enzyme	96.8	29.4	46.7
MGA_1613	LOCUS_16130	sequence1:1027801..1028232(-)	partial			WP_002287681.1	Fe-S cluster assembly protein SufD	90.2	30.1	32.6
MGA_1625	LOCUS_16250	sequence1:1035229..1035462(-)	internal_stop_codon	1035229..1035231(-)		WP_009931845.1	thiol peroxidase	66.2	31.5	50.0
MGA_1626	LOCUS_16260	sequence1:1035466..1035975(-)	internal_stop_codon	1035976..1035978(-)		WP_011948683.1	4Fe-4S single cluster domain-containing protein	93.5	81.7	34.1
MGA_1627	LOCUS_16270	sequence1:1036056..1037018(-)	partial			WP_010875923.1	ATP-dependent Clp protease ATP-binding subunit	97.8	53.1	43.2
MGA_1631	LOCUS_16310	sequence1:1040859..1041224(-)	internal_stop_codon	1040859..1040861(-)		WP_010966238.1	DeoR/GlpR family DNA-binding transcription regulator	100.0	49.6	36.2
MGA_1638	LOCUS_16380	sequence1:1045408..1046658(-)	internal_stop_codon	1045327..1045329(-),1045408..1045410(-)		WP_164930803.1	IGHMBP2 family helicase	35.3	27.6	28.1
MGA_1640	LOCUS_16400	sequence1:1046983..1047432(-)	partial			WP_064496391.1	IGHMBP2 family helicase	72.5	16.7	38.2
MGA_1644	LOCUS_16440	sequence1:1049272..1049610(-)	internal_stop_codon	1049665..1049667(-)		WP_001260793.1	50S ribosomal protein L13	96.4	74.5	63.0
MGA_1655	LOCUS_16550	sequence1:1057342..1057986(-)	frameshift,internal_stop_codon	1058039..1058041(-),1057352..1057354(-),1057274..1057276(-)	1057416,1057358,1057234,1057966	WP_009932214.1	fructose-specific PTS transporter subunit EIIC	85.5	30.1	29.2
MGA_1658	LOCUS_16580	sequence1:1058966..1059439(-)	internal_stop_codon	1058696..1058698(-),1058966..1058968(-),1058792..1058794(-),1058741..1058743(-),1058900..1058902(-)		WP_011167107.1	ECF transporter S component	86.0	45.5	38.9
MGA_1660	LOCUS_16600	sequence1:1060329..1060577(+)	frameshift		1060556	WP_000395727.1	YigZ family protein	91.5	36.5	54.5
MGA_1661	LOCUS_16610	sequence1:1061108..1061272(-)	internal_stop_codon	1061378..1061380(-),1061108..1061110(-),1060955..1060957(-),1061447..1061449(-)		WP_001239385.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	100.0	24.9	55.6
MGA_1669	LOCUS_16690	sequence1:1068295..1068534(+)	internal_stop_codon	1068532..1068534(+)		WP_003131748.1	MBL fold metallo-hydrolase	83.5	31.4	34.8
MGA_1688	LOCUS_16880	sequence1:1081174..1081812(-)	internal_stop_codon	1081174..1081176(-)		WP_020862624.1	ABC transporter permease	99.1	12.3	22.5
MGA_1699	LOCUS_16990	sequence1:1087981..1088574(-)	internal_stop_codon	1088578..1088580(-),1088602..1088604(-)		WP_011948069.1	PTS transporter subunit EIIC	84.8	24.5	33.9
MGA_1700	LOCUS_17000	sequence1:1088602..1088937(-)	internal_stop_codon	1088578..1088580(-),1088602..1088604(-)		WP_000938894.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	89.2	19.6	59.6
MGA_1701	LOCUS_17010	sequence1:1089265..1089435(-)	internal_stop_codon	1089586..1089588(-),1089523..1089525(-),1089265..1089267(-),1089127..1089129(-),1089625..1089627(-),1089259..1089261(-)		WP_011166334.1	PTS transporter subunit EIIC	92.9	9.7	59.3
MGA_1704	LOCUS_17040	sequence1:1090888..1091322(-)	internal_stop_codon	1090888..1090890(-)		WP_012027818.1	MurR/RpiR family transcriptional regulator	92.4	48.4	31.4
MGA_1705	LOCUS_17050	sequence1:1091570..1093216(-)	internal_stop_codon	1093388..1093390(-),1093316..1093318(-)		WP_011183253.1	cation-translocating P-type ATPase	97.3	59.8	46.5
MGA_1707	LOCUS_17070	sequence1:1093388..1093957(-)	internal_stop_codon	1093388..1093390(-),1093316..1093318(-),1093997..1093999(-)		WP_011166486.1	cation-translocating P-type ATPase	96.8	19.3	51.1
MGA_1709	LOCUS_17090	sequence1:1095886..1096101(-)	internal_stop_codon	1095886..1095888(-),1095613..1095615(-)		WP_005174786.1	acetolactate decarboxylase	88.7	24.1	57.1
MGA_1710	LOCUS_17100	sequence1:1096101..1096346(-)	internal_stop_codon	1096365..1096367(-),1096581..1096583(-)		WP_000103515.1	acetolactate synthase AlsS	98.8	14.2	66.2
MGA_1711	LOCUS_17110	sequence1:1096365..1096580(-)	internal_stop_codon	1096365..1096367(-),1096581..1096583(-)		WP_010989867.1	acetolactate synthase AlsS	100.0	12.6	90.1
MGA_1713	LOCUS_17130	sequence1:1096902..1097768(-)	internal_stop_codon	1096902..1096904(-)		WP_010989867.1	acetolactate synthase AlsS	97.2	49.6	72.5
MGA_1714	LOCUS_17140	sequence1:1097949..1098233(-)	internal_stop_codon	1097949..1097951(-),1098240..1098242(-)		WP_011183540.1	class II fructose-1,6-bisphosphate aldolase	98.9	31.4	72.0
MGA_1715	LOCUS_17150	sequence1:1098240..1098689(-)	internal_stop_codon	1097949..1097951(-),1098240..1098242(-),1098708..1098710(-)		WP_011183540.1	class II fructose-1,6-bisphosphate aldolase	98.7	49.7	66.0
MGA_1716	LOCUS_17160	sequence1:1099631..1100032(-)	internal_stop_codon	1099562..1099564(-),1100069..1100071(-),1099631..1099633(-),1099592..1099594(-)		WP_020862895.1	ABC transporter permease	89.5	8.3	26.1
MGA_1721	LOCUS_17210	sequence1:1102151..1102645(-)	internal_stop_codon	1102709..1102711(-),1102076..1102078(-),1102151..1102153(-),1102667..1102669(-)		WP_011183053.1	ABC transporter permease	99.4	11.5	26.1
MGA_1724	LOCUS_17240	sequence1:1104319..1104693(-)	internal_stop_codon	1104694..1104696(-),1104877..1104879(-)		WP_010989743.1	DNA-formamidopyrimidine glycosylase	97.6	44.3	41.3
MGA_1725	LOCUS_17250	sequence1:1104694..1104867(-)	internal_stop_codon	1104694..1104696(-),1104877..1104879(-)		WP_001114478.1	DNA-formamidopyrimidine glycosylase	98.2	20.3	46.4
MGA_1726	LOCUS_17260	sequence1:1104877..1105149(-)	internal_stop_codon	1104694..1104696(-),1104877..1104879(-)		WP_002355756.1	DNA-formamidopyrimidine glycosylase	91.1	29.3	57.3
MGA_1729	LOCUS_17290	sequence1:1107359..1108780(-)	internal_stop_codon	1109039..1109041(-),1108853..1108855(-)		WP_011166854.1	DNA polymerase I	99.8	53.0	48.5
MGA_1730	LOCUS_17300	sequence1:1109039..1109398(-)	internal_stop_codon	1109438..1109440(-),1109039..1109041(-),1108853..1108855(-)		WP_011183480.1	DNA polymerase I	91.6	12.8	53.0
MGA_1731	LOCUS_17310	sequence1:1109438..1109953(-)	internal_stop_codon	1109438..1109440(-)		WP_011183480.1	DNA polymerase I	100.0	19.3	57.2
MGA_1734	LOCUS_17340	sequence1:1111669..1112052(-)	internal_stop_codon	1111669..1111671(-)		WP_000692835.1	ribonuclease M5	99.2	71.4	40.6
MGA_1735	LOCUS_17350	sequence1:1112268..1112567(+)	internal_stop_codon	1112565..1112567(+)		WP_003644658.1	rod shape-determining protein	87.9	26.1	50.6
MGA_1736	LOCUS_17360	sequence1:1112649..1113314(+)	internal_stop_codon	1112565..1112567(+)		WP_003227776.1	cell shape-determining protein Mbl	94.6	62.8	40.7
MGA_1737	LOCUS_17370	sequence1:1113755..1114141(+)	partial			WP_003234924.1	bifunctional transcriptional activator/DNA repair enzyme AdaA	73.4	46.4	42.9
MGA_1738	LOCUS_17380	sequence1:1114869..1115195(+)	internal_stop_codon	1115193..1115195(+)		WP_011404386.1	rod shape-determining protein	76.9	24.8	41.0
MGA_1739	LOCUS_17390	sequence1:1115256..1115927(+)	internal_stop_codon	1115193..1115195(+)		WP_010966142.1	rod shape-determining protein	90.1	59.1	44.8
MGA_1742	LOCUS_17420	sequence1:1118199..1118483(+)	internal_stop_codon	1118481..1118483(+)		WP_003644658.1	rod shape-determining protein	92.6	26.1	51.7
MGA_1743	LOCUS_17430	sequence1:1118565..1119251(+)	internal_stop_codon	1118481..1118483(+)		WP_003428483.1	rod shape-determining protein	91.7	61.2	47.2
MGA_1744	LOCUS_17440	sequence1:1119318..1119710(-)	internal_stop_codon	1119753..1119755(-)		WP_012545153.1	TatD family nuclease-associated radical SAM protein	98.5	28.5	50.0
MGA_1745	LOCUS_17450	sequence1:1119753..1120091(-)	internal_stop_codon	1119753..1119755(-)		WP_011182945.1	TatD family hydrolase	89.3	38.8	51.0
MGA_1750	LOCUS_17500	sequence1:1122550..1123059(-)	internal_stop_codon	1123339..1123341(-),1123063..1123065(-)		WP_011167185.1	membrane protein insertase YidC	60.4	26.3	55.8
MGA_1751	LOCUS_17510	sequence1:1123063..1123314(-)	internal_stop_codon	1123339..1123341(-),1123516..1123518(-),1123063..1123065(-)		WP_084322434.1	membrane protein insertase YidC	98.8	19.6	52.4
